Literature DB >> 21652485

Patterns of molecular and morphological differentiation in Fagus (Fagaceae): phylogenetic implications.

Thomas Denk1, Guido W Grimm, Vera Hemleben.   

Abstract

To study phylogenetic relationships among species of Fagus, the internal transcribed spacer regions ITS1 and ITS2 of the nuclear ribosomal DNA and morphological data were analyzed. Both molecular and morphologically based phylogenies suggest that Eurasian species of Fagus subgenus Fagus are basal to the North American Fagus grandifolia. The subgenus Fagus is a paraphyletic group basal to three East Asian species forming the subgenus Engleriana. Due to a considerably large amount of DNA polymorphism, relationships among basal species of Fagus could not be entirely resolved when analyzing ITS sequences with standard methods. Morphological trees helped to resolve more clearly relationships within the subgenus Fagus. The East Asian F. hayatae is suggested to be basal to the rest of the genus. This hypothesis is further supported by distinctive patterns of nucleotide variability found for ITS regions, allowing for basic and derived types to be distinguished. The high degree of ITS polymorphism within Fagus can be explained by (1) the complex evolutionary behavior of this marker, (2) the stenoecious ecological characteristic of Fagus with respect to its continuous geographic range throughout much of the Cenozoic, and (3) the absence of major radiations into further habitats as occurred in other Fagaceae.

Entities:  

Year:  2005        PMID: 21652485     DOI: 10.3732/ajb.92.6.1006

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  12 in total

1.  The fossil Osmundales (Royal Ferns)-a phylogenetic network analysis, revised taxonomy, and evolutionary classification of anatomically preserved trunks and rhizomes.

Authors:  Benjamin Bomfleur; Guido W Grimm; Stephen McLoughlin
Journal:  PeerJ       Date:  2017-07-11       Impact factor: 2.984

2.  Genetic differentiation in the timing of budburst in Fagus crenata in relation to temperature and photoperiod.

Authors:  Noriyuki Osada; Kazutaka Murase; Kazuaki Tsuji; Haruo Sawada; Koichi Nunokawa; Masami Tsukahara; Tsutom Hiura
Journal:  Int J Biometeorol       Date:  2018-07-05       Impact factor: 3.787

3.  Species relationships and divergence times in beeches: new insights from the inclusion of 53 young and old fossils in a birth-death clock model.

Authors:  S S Renner; Guido W Grimm; Paschalia Kapli; Thomas Denk
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-07-19       Impact factor: 6.237

4.  Its evolution in Platanus (Platanaceae): homoeologues, pseudogenes and ancient hybridization.

Authors:  Guido W Grimm; Thomas Denk
Journal:  Ann Bot       Date:  2007-12-18       Impact factor: 4.357

5.  Pseudodidymellaceae fam. nov.: Phylogenetic affiliations of mycopappus-like genera in Dothideomycetes.

Authors:  A Hashimoto; M Matsumura; K Hirayama; R Fujimoto; K Tanaka
Journal:  Stud Mycol       Date:  2017-07-13       Impact factor: 16.097

6.  Unexpected presence of Fagus orientalis complex in Italy as inferred from 45,000-year-old DNA pollen samples from Venice lagoon.

Authors:  Donatella Paffetti; Cristina Vettori; David Caramelli; Cristiano Vernesi; Martina Lari; Arturo Paganelli; Ladislav Paule; Raffaello Giannini
Journal:  BMC Evol Biol       Date:  2007-08-16       Impact factor: 3.260

7.  General functions to transform associate data to host data, and their use in phylogenetic inference from sequences with intra-individual variability.

Authors:  Markus Göker; Guido W Grimm
Journal:  BMC Evol Biol       Date:  2008-03-18       Impact factor: 3.260

8.  Comparative phylogeography of two sympatric beeches in subtropical China: Species-specific geographic mosaic of lineages.

Authors:  Zhi-Yong Zhang; Rong Wu; Qun Wang; Zhi-Rong Zhang; Jordi López-Pujol; Deng-Mei Fan; De-Zhu Li
Journal:  Ecol Evol       Date:  2013-10-11       Impact factor: 2.912

9.  The phylogeography of Fagus hayatae (Fagaceae): genetic isolation among populations.

Authors:  Ling-Xiao Ying; Ting-Ting Zhang; Ching-An Chiu; Tze-Ying Chen; Shu-Jin Luo; Xiao-Yong Chen; Ze-Hao Shen
Journal:  Ecol Evol       Date:  2016-03-21       Impact factor: 2.912

10.  Plastome Characterization and Phylogenomics of East Asian Beeches with a Special Emphasis on Fagus multinervis on Ulleung Island, Korea.

Authors:  JiYoung Yang; Koji Takayama; Jin-Suk Youn; Jae-Hong Pak; Seung-Chul Kim
Journal:  Genes (Basel)       Date:  2020-11-12       Impact factor: 4.096

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