Literature DB >> 21651308

Environment- and sequence-dependence of helical type in membrane-spanning peptides composed of β3-amino acids.

Ivan V Korendovych1, Scott J Shandler, Geronda L Montalvo, William F DeGrado.   

Abstract

Transmembrane (TM) β-peptides comprised of acyclic β(3)-amino acids demonstrate equilibrium between 12- and 14-helical structures in an environment- and sequence-dependent manner. Circular dichroism (CD) spectra of TM β(3)-peptides may be described as linear combinations of the 12- and 14-helical CD spectra. The apparent malleability of β(3)-substituted acyclic β-peptides has practical implications for foldamer design, as it suggests that both the 14-helix and 12-helix might be reasonable platforms for molecular recognition.

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Year:  2011        PMID: 21651308      PMCID: PMC3124938          DOI: 10.1021/ol201218y

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  19 in total

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Authors:  W C Johnson
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

Review 2.  Circular dichroism.

Authors:  R W Woody
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

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4.  Residue-based control of helix shape in beta-peptide oligomers.

Authors:  D H Appella; L A Christianson; D A Klein; D R Powell; X Huang; J J Barchi; S H Gellman
Journal:  Nature       Date:  1997-05-22       Impact factor: 49.962

5.  Infrared signature and folding dynamics of a helical beta-peptide.

Authors:  Geronda Montalvo; Matthias M Waegele; Scott Shandler; Feng Gai; William F DeGrado
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

6.  Beta-peptide bundles with fluorous cores.

Authors:  Matthew A Molski; Jessica L Goodman; Cody J Craig; He Meng; Krishna Kumar; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

7.  Computational design of a self-assembling β-peptide oligomer.

Authors:  Ivan V Korendovych; Yong Ho Kim; Andrew H Ryan; James D Lear; William F Degrado; Scott J Shandler
Journal:  Org Lett       Date:  2010-10-14       Impact factor: 6.005

8.  Novel amphiphilic alpha-helix mimetics based on a bis-benzamide scaffold.

Authors:  Srinivasa Marimganti; Murthy N Cheemala; Jung-Mo Ahn
Journal:  Org Lett       Date:  2009-10-01       Impact factor: 6.005

9.  Beta-peptidic peptidomimetics.

Authors:  Dieter Seebach; James Gardiner
Journal:  Acc Chem Res       Date:  2008-06-26       Impact factor: 22.384

10.  De novo design of antimicrobial polymers, foldamers, and small molecules: from discovery to practical applications.

Authors:  Gregory N Tew; Richard W Scott; Michael L Klein; William F Degrado
Journal:  Acc Chem Res       Date:  2010-01-19       Impact factor: 22.384

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  4 in total

Review 1.  Catalytic peptide assemblies.

Authors:  O Zozulia; M A Dolan; I V Korendovych
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

2.  Computational design of a β-peptide that targets transmembrane helices.

Authors:  Scott J Shandler; Ivan V Korendovych; David T Moore; Kathryn B Smith-Dupont; Craig N Streu; Rustem I Litvinov; Paul C Billings; Feng Gai; Joel S Bennett; William F DeGrado
Journal:  J Am Chem Soc       Date:  2011-07-22       Impact factor: 15.419

3.  Functional characterization of a melittin analog containing a non-natural tryptophan analog.

Authors:  Zachary Ridgway; Angela L Picciano; Pallavi M Gosavi; Yurii S Moroz; Christopher E Angevine; Amy E Chavis; Joseph E Reiner; Ivan V Korendovych; Gregory A Caputo
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

4.  α-Helix mimicry with α/β-peptides.

Authors:  Lisa M Johnson; Samuel H Gellman
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

  4 in total

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