Literature DB >> 21647760

Insertion-deletion polymorphisms--utilization on forensic analysis.

Pablo Abdon da Costa Francez1, Elzemar Martins Ribeiro Rodrigues, Afrânio Maurício de Velasco, Sidney Emanuel Batista dos Santos.   

Abstract

Insertion-deletion (INDEL) markers are very frequent in the human genome and present several advantages for population and forensic studies, such as low mutation rates, easy interpretation, small amplicons, easy genotyping, and the possibility of using multiplex PCR. The great adaptability of INDELs for amplification of low copy number or degraded DNA allows its using as an interesting platform of genetic identity by DNA in forensic cases. In the present study, we tested the ability of 48 diallelic INDEL markers on genotyping forensic samples collected from different biological samples related to criminal cases. Moreover, we evaluated the lowest DNA concentration with which there was amplification of all markers from each one of three indel-plex panels. When comparing the performances obtained by the indel-plex panels described in this study with results obtained using Identifiler® kit (Applied Biosystems) related to forensic samples, as well as to control samples with different concentrations of DNA, we observed superior efficiency on samples with low copy number or in the presence of inhibitors.

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Year:  2011        PMID: 21647760     DOI: 10.1007/s00414-011-0588-z

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  8 in total

1.  Estimate of the mutation rate per nucleotide in humans.

Authors:  M W Nachman; S L Crowell
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

2.  Resolving relationship tests that show ambiguous STR results using autosomal SNPs as supplementary markers.

Authors:  C Phillips; M Fondevila; M García-Magariños; A Rodriguez; A Salas; A Carracedo; M V Lareu
Journal:  Forensic Sci Int Genet       Date:  2008-04-18       Impact factor: 4.882

3.  Assessing individual interethnic admixture and population substructure using a 48-insertion-deletion (INSEL) ancestry-informative marker (AIM) panel.

Authors:  Ney P C Santos; Elzemar M Ribeiro-Rodrigues; Andrea K C Ribeiro-Dos-Santos; Rui Pereira; Leonor Gusmão; António Amorim; Joáo F Guerreiro; Marco A Zago; Cecília Matte; Mara H Hutz; Sidney E B Santos
Journal:  Hum Mutat       Date:  2010-02       Impact factor: 4.878

4.  Allelic frequencies and statistical data obtained from 48 AIM INDEL loci in an admixed population from the Brazilian Amazon.

Authors:  Pablo Abdon da Costa Francez; Elzemar Martins Ribeiro-Rodrigues; Sidney Emanuel Batista dos Santos
Journal:  Forensic Sci Int Genet       Date:  2011-05-01       Impact factor: 4.882

5.  Increasing DNA extraction yield from saliva stains with a modified Chelex method.

Authors:  D Sweet; M Lorente; A Valenzuela; J A Lorente; J C Alvarez
Journal:  Forensic Sci Int       Date:  1996-12-27       Impact factor: 2.395

6.  Mutation of human short tandem repeats.

Authors:  J L Weber; C Wong
Journal:  Hum Mol Genet       Date:  1993-08       Impact factor: 6.150

7.  Human diallelic insertion/deletion polymorphisms.

Authors:  James L Weber; Donna David; Jeremy Heil; Ying Fan; Chengfeng Zhao; Gabor Marth
Journal:  Am J Hum Genet       Date:  2002-09-04       Impact factor: 11.025

8.  A new multiplex for human identification using insertion/deletion polymorphisms.

Authors:  Rui Pereira; Christopher Phillips; Cíntia Alves; António Amorim; Angel Carracedo; Leonor Gusmão
Journal:  Electrophoresis       Date:  2009-11       Impact factor: 3.535

  8 in total
  6 in total

1.  X-chromosomal 21-indel marker panel in German and Baltic populations.

Authors:  Jeanett Edelmann; Michael Kohl; Jan Dressler; Andre Hoffmann
Journal:  Int J Legal Med       Date:  2015-07-12       Impact factor: 2.686

2.  Exploring the implications of INDELs in neuropsychiatric genetics: challenges and perspectives.

Authors:  R R Lemos; M B R Souza; J R M Oliveira
Journal:  J Mol Neurosci       Date:  2012-02-16       Impact factor: 3.444

Review 3.  Potential forensic use of a 33 X-InDel panel in the Argentinean population.

Authors:  Mariela Caputo; M A Amador; S Santos; D Corach
Journal:  Int J Legal Med       Date:  2016-06-09       Impact factor: 2.686

4.  Detection of 40 bp insertion-deletion (INDEL) in mitochondrial control region among sambar (Rusa unicolor) populations in India.

Authors:  Sandeep Kumar Gupta; Ajit Kumar; Ajay Gaur; Syed Ainul Hussain
Journal:  BMC Res Notes       Date:  2015-10-19

5.  Fabry disease: Evidence for a regional founder effect of the GLA gene mutation 30delG in Brazilian patients.

Authors:  Dayse Oliveira de Alencar; Cristina Netto; Patricia Ashton-Prolla; Roberto Giugliani; Ândrea Ribeiro-Dos-Santos; Fernanda Pereira; Ursula Matte; Ney Santos; Sidney Santos
Journal:  Mol Genet Metab Rep       Date:  2014-09-26

6.  Systematic Evaluation of a Novel 6-dye Direct and Multiplex PCR-CE-Based InDel Typing System for Forensic Purposes.

Authors:  Haoliang Fan; Yitong He; Shuanglin Li; Qiqian Xie; Fenfen Wang; Zhengming Du; Yating Fang; Pingming Qiu; Bofeng Zhu
Journal:  Front Genet       Date:  2022-01-10       Impact factor: 4.599

  6 in total

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