Literature DB >> 21642966

Near-infrared branding efficiently correlates light and electron microscopy.

Derron Bishop1, Ivana Nikić, Mary Brinkoetter, Sharmon Knecht, Stephanie Potz, Martin Kerschensteiner, Thomas Misgeld.   

Abstract

The correlation of light and electron microscopy of complex tissues remains a major challenge. Here we report near-infrared branding (NIRB), which facilitates such correlation by using a pulsed, near-infrared laser to create defined fiducial marks in three dimensions in fixed tissue. As these marks are fluorescent and can be photo-oxidized to generate electron contrast, they can guide re-identification of previously imaged structures as small as dendritic spines by electron microscopy.

Mesh：

Year:  2011        PMID： 21642966     DOI： 10.1038/nmeth.1622

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


  21 in total

1.  Axon branch removal at developing synapses by axosome shedding.

Authors:  Derron L Bishop; Thomas Misgeld; Mark K Walsh; Wen-Biao Gan; Jeff W Lichtman
Journal:  Neuron       Date:  2004-11-18       Impact factor: 17.173

2.  Reconstruct: a free editor for serial section microscopy.

Authors:  J C Fiala
Journal:  J Microsc       Date:  2005-04       Impact factor: 1.758

Review 3.  Markers for correlated light and electron microscopy.

Authors:  Gina E Sosinsky; Ben N G Giepmans; Thomas J Deerinck; Guido M Gaietta; Mark H Ellisman
Journal:  Methods Cell Biol       Date:  2007       Impact factor: 1.441

Review 4.  Balancing structure and function at hippocampal dendritic spines.

Authors:  Jennifer N Bourne; Kristen M Harris
Journal:  Annu Rev Neurosci       Date:  2008       Impact factor: 12.449

5.  Serial section scanning electron microscopy of adult brain tissue using focused ion beam milling.

Authors:  Graham Knott; Herschel Marchman; David Wall; Ben Lich
Journal:  J Neurosci       Date:  2008-03-19       Impact factor: 6.167

6.  Analysis of fractalkine receptor CX(3)CR1 function by targeted deletion and green fluorescent protein reporter gene insertion.

Authors:  S Jung; J Aliberti; P Graemmel; M J Sunshine; G W Kreutzberg; A Sher; D R Littman
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

7.  Correlative microscopy and electron tomography of GFP through photooxidation.

Authors:  Markus Grabenbauer; Willie J C Geerts; Julia Fernadez-Rodriguez; Andreas Hoenger; Abraham J Koster; Tommy Nilsson
Journal:  Nat Methods       Date:  2005-11       Impact factor: 28.547

8.  Ultrastructural analysis of hippocampal neuropil from the connectomics perspective.

Authors:  Yuriy Mishchenko; Tao Hu; Josef Spacek; John Mendenhall; Kristen M Harris; Dmitri B Chklovskii
Journal:  Neuron       Date:  2010-09-23       Impact factor: 17.173

9.  In vivo imaging of single axons in the mouse spinal cord.

Authors:  Thomas Misgeld; Ivana Nikic; Martin Kerschensteiner
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

10.  Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure.

Authors:  Winfried Denk; Heinz Horstmann
Journal:  PLoS Biol       Date:  2004-10-19       Impact factor: 8.029
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  39 in total

Review 1.  Correlated light and electron microscopy: ultrastructure lights up!

Authors:  Pascal de Boer; Jacob P Hoogenboom; Ben N G Giepmans
Journal:  Nat Methods       Date:  2015-06       Impact factor: 28.547

2.  Semiautomated correlative 3D electron microscopy of in vivo-imaged axons and dendrites.

Authors:  Bohumil Maco; Marco Cantoni; Anthony Holtmaat; Anna Kreshuk; Fred A Hamprecht; Graham W Knott
Journal:  Nat Protoc       Date:  2014-05-15       Impact factor: 13.491

3.  Stimulation of functional neuronal regeneration from Müller glia in adult mice.

Authors:  Nikolas L Jorstad; Matthew S Wilken; William N Grimes; Stefanie G Wohl; Leah S VandenBosch; Takeshi Yoshimatsu; Rachel O Wong; Fred Rieke; Thomas A Reh
Journal:  Nature       Date:  2017-07-26       Impact factor: 49.962

4.  Motor learning drives dynamic patterns of intermittent myelination on learning-activated axons.

Authors:  Clara M Bacmeister; Rongchen Huang; Lindsay A Osso; Michael A Thornton; Lauren Conant; Anthony R Chavez; Alon Poleg-Polsky; Ethan G Hughes
Journal:  Nat Neurosci       Date:  2022-09-30       Impact factor: 28.771

5.  Nano-fEM: protein localization using photo-activated localization microscopy and electron microscopy.

Authors:  Shigeki Watanabe; Jackson Richards; Gunther Hollopeter; Robert J Hobson; Wayne M Davis; Erik M Jorgensen
Journal:  J Vis Exp       Date:  2012-12-03       Impact factor: 1.355

6.  Glutamatergic Monopolar Interneurons Provide a Novel Pathway of Excitation in the Mouse Retina.

Authors:  Luca Della Santina; Sidney P Kuo; Takeshi Yoshimatsu; Haruhisa Okawa; Sachihiro C Suzuki; Mrinalini Hoon; Kotaro Tsuboyama; Fred Rieke; Rachel O L Wong
Journal:  Curr Biol       Date:  2016-07-14       Impact factor: 10.834

Review 7.  In Vivo Imaging of CNS Injury and Disease.

Authors:  Katerina Akassoglou; Mario Merlini; Victoria A Rafalski; Raquel Real; Liang Liang; Yunju Jin; Sarah E Dougherty; Vincenzo De Paola; David J Linden; Thomas Misgeld; Binhai Zheng
Journal:  J Neurosci       Date:  2017-11-08       Impact factor: 6.167

8.  Increased axonal bouton dynamics in the aging mouse cortex.

Authors:  Federico W Grillo; Sen Song; Leonor M Teles-Grilo Ruivo; Lieven Huang; Ge Gao; Graham W Knott; Bohumil Maco; Valentina Ferretti; Dawn Thompson; Graham E Little; Vincenzo De Paola
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-29       Impact factor: 11.205

9.  A high-density narrow-field inhibitory retinal interneuron with direct coupling to Müller glia.

Authors:  William N Grimes; Didem Göz Aytürk; Mrinalini Hoon; Takeshi Yoshimatsu; Clare Gamlin; Daniel Carrera; Amurta Nath; Francisco M Nadal-Nicolás; Richard M Ahlquist; Adit Sabnis; David M Berson; Jeffrey S Diamond; Rachel O Wong; Connie Cepko; Fred Rieke
Journal:  J Neurosci       Date:  2021-06-01       Impact factor: 6.167

10.  Correlative in vivo 2 photon and focused ion beam scanning electron microscopy of cortical neurons.

Authors:  Bohumil Maco; Anthony Holtmaat; Marco Cantoni; Anna Kreshuk; Christoph N Straehle; Fred A Hamprecht; Graham W Knott
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240
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