Literature DB >> 21640949

Soil microbial diversity: Methodological strategy, spatial overview and functional interest.

Pierre-Alain Maron1, Christophe Mougel, Lionel Ranjard.   

Abstract

Since the development of industrialization, urbanization and agriculture, soils have been subjected to numerous variations in environmental conditions, which have resulted in modifications of the taxonomic diversity and functioning of the indigenous microbial communities. As a consequence, the functional significance of these losses/modifications of biodiversity, in terms of the capacity of ecosystems to maintain the functions and services on which humanity depends, is now of pivotal importance. In this context, one of the main challenges in soil microbial ecology is to better understand and predict the processes that drive soil microbial diversity and the link between diversity and ecosystem process. This review describes past, present and ongoing conceptual and methodological strategies employed to better assess and understand the distribution and evolution of soil microbial diversity with the aim of increasing our capacity to translate such diversity into soil biological functioning and, more widely, into ecosystem services.
Copyright © 2011 Académie des sciences. Published by Elsevier SAS. All rights reserved.

Mesh:

Year:  2011        PMID: 21640949     DOI: 10.1016/j.crvi.2010.12.003

Source DB:  PubMed          Journal:  C R Biol        ISSN: 1631-0691            Impact factor:   1.583


  23 in total

1.  Bacterial Diversity Patterns Differ in Soils Developing in Sub-tropical and Cool-Temperate Ecosystems.

Authors:  Shankar G Shanmugam; Zenaida V Magbanua; Mark A Williams; Kamlesh Jangid; William B Whitman; Daniel G Peterson; William L Kingery
Journal:  Microb Ecol       Date:  2016-11-26       Impact factor: 4.552

2.  Optimization of high-yielding protocol for DNA extraction from the forest rhizosphere microbes.

Authors:  Sadam D V Satyanarayana; M S R Krishna; Pindi Pavan Kumar
Journal:  3 Biotech       Date:  2017-05-29       Impact factor: 2.406

Review 3.  Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Authors:  Philippe C Baveye; Wilfred Otten; Alexandra Kravchenko; María Balseiro-Romero; Éléonore Beckers; Maha Chalhoub; Christophe Darnault; Thilo Eickhorst; Patricia Garnier; Simona Hapca; Serkan Kiranyaz; Olivier Monga; Carsten W Mueller; Naoise Nunan; Valérie Pot; Steffen Schlüter; Hannes Schmidt; Hans-Jörg Vogel
Journal:  Front Microbiol       Date:  2018-08-27       Impact factor: 5.640

4.  Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity.

Authors:  L Ranjard; S Dequiedt; N Chemidlin Prévost-Bouré; J Thioulouse; N P A Saby; M Lelievre; P A Maron; F E R Morin; A Bispo; C Jolivet; D Arrouays; P Lemanceau
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

5.  Assessing the relative effects of geographic location and soil type on microbial communities associated with straw decomposition.

Authors:  Bo Sun; Xiaoyue Wang; Feng Wang; Yuji Jiang; Xue-Xian Zhang
Journal:  Appl Environ Microbiol       Date:  2013-03-22       Impact factor: 4.792

6.  Improving soil bacterial taxa-area relationships assessment using DNA meta-barcoding.

Authors:  S Terrat; S Dequiedt; W Horrigue; M Lelievre; C Cruaud; N P A Saby; C Jolivet; D Arrouays; P-A Maron; L Ranjard; N Chemidlin Prévost-Bouré
Journal:  Heredity (Edinb)       Date:  2014-10-08       Impact factor: 3.821

7.  Bioinformatics Approach to Assess the Biogeographical Patterns of Soil Communities: The Utility for Soil Provenance.

Authors:  Natalie Damaso; Julian Mendel; Maria Mendoza; Eric J von Wettberg; Giri Narasimhan; DeEtta Mills
Journal:  J Forensic Sci       Date:  2018-01-22       Impact factor: 1.832

Review 8.  On the nature of mycobacteriophage diversity and host preference.

Authors:  Deborah Jacobs-Sera; Laura J Marinelli; Charles Bowman; Gregory W Broussard; Carlos Guerrero Bustamante; Michelle M Boyle; Zaritza O Petrova; Rebekah M Dedrick; Welkin H Pope; Robert L Modlin; Roger W Hendrix; Graham F Hatfull
Journal:  Virology       Date:  2012-10-22       Impact factor: 3.616

9.  Soil microbial diversity drives the priming effect along climate gradients: a case study in Madagascar.

Authors:  Kanto Razanamalala; Tantely Razafimbelo; Pierre-Alain Maron; Lionel Ranjard; Nicolas Chemidlin; Mélanie Lelièvre; Samuel Dequiedt; Volaniaina H Ramaroson; Claire Marsden; Thierry Becquer; Jean Trap; Eric Blanchart; Laetitia Bernard
Journal:  ISME J       Date:  2017-10-17       Impact factor: 11.217

10.  Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure.

Authors:  Pierre Plassart; Sébastien Terrat; Bruce Thomson; Robert Griffiths; Samuel Dequiedt; Mélanie Lelievre; Tiffanie Regnier; Virginie Nowak; Mark Bailey; Philippe Lemanceau; Antonio Bispo; Abad Chabbi; Pierre-Alain Maron; Christophe Mougel; Lionel Ranjard
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

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