Literature DB >> 21637870

Adsorption of DNA/RNA nucleobases on hexagonal boron nitride sheet: an ab initio study.

Qing Lin1, Xiaolong Zou, Gang Zhou, Rui Liu, Jian Wu, Jia Li, Wenhui Duan.   

Abstract

Our ab initio calculations indicate that the interaction of deoxyribonucleic/ribonucleic acid (DNA/RNA) nucleobases [guanine (G), adenine (A), thymine (T), cytosine (C), and uracil (U)] with the hexagonal boron nitride (h-BN) sheet, a polar but chemically inert surface, is governed by mutual polarization. Unlike the case of graphene, all nucleobases exhibit the same stacking arrangement on the h-BN sheet due to polarization effects: the anions (N and O atoms) of nucleobases prefer to stay on top of cations (B) of the substrate as far as possible, regardless of the biological properties of nucleobases. The adsorption energies, ranging from 0.5 eV to 0.69 eV, increase in the order of U, C, T, A and G, which can be attributed to different side groups or atoms of nucleobases. The fundamental nature of DNA/RNA nucleobases and h-BN sheet remains unchanged upon adsorption, suggesting that the h-BN sheet is a promising template for DNA/RNA-related research, such as self-assembly.

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Year:  2011        PMID: 21637870     DOI: 10.1039/c1cp20783k

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  9 in total

1.  A DFT study on the adsorption of DNA nucleobases on the C3N nanotubes as a sequencer.

Authors:  Jie Zhao; Wenli Li; Saeed Amir Aslanzadeh
Journal:  J Mol Model       Date:  2021-01-30       Impact factor: 1.810

Review 2.  Surface modification and pattern formation by nucleobases and their coordination complexes.

Authors:  R Kamal Saravanan; Ilesha Avasthi; Rajneesh Kumar Prajapati; Sandeep Verma
Journal:  RSC Adv       Date:  2018-07-06       Impact factor: 4.036

3.  Stability and properties of the two-dimensional hexagonal boron nitride monolayer functionalized by hydroxyl (OH) radicals: a theoretical study.

Authors:  Hong-mei Wang; Yue-jie Liu; Hong-xia Wang; Jing-xiang Zhao; Qing-hai Cai; Xuan-zhang Wang
Journal:  J Mol Model       Date:  2013-10-05       Impact factor: 1.810

4.  Continuous flow synthesis of phosphate binding h-BN@magnetite hybrid material.

Authors:  Ahmed Hussein Mohammed Al-Antaki; Xuan Luo; Alex Duan; Robert N Lamb; Ela Eroglu; Wayne Hutchison; Yi-Chao Zou; Jin Zou; Colin L Raston
Journal:  RSC Adv       Date:  2018-12-05       Impact factor: 4.036

5.  Antibacterial effect of boron nitride flakes with controlled orientation in polymer composites.

Authors:  Santosh Pandit; Karolina Gaska; V R S S Mokkapati; Sven Forsberg; Magnus Svensson; Roland Kádár; Ivan Mijakovic
Journal:  RSC Adv       Date:  2019-10-17       Impact factor: 4.036

6.  DNA Sequencing by Hexagonal Boron Nitride Nanopore: A Computational Study.

Authors:  Liuyang Zhang; Xianqiao Wang
Journal:  Nanomaterials (Basel)       Date:  2016-06-06       Impact factor: 5.076

7.  Instability and translocation through nanopores of DNA interacting with single-layer materials.

Authors:  Mansoor H Alshehri; Faisal Z Duraihem; Mohammed A Aba Oud
Journal:  RSC Adv       Date:  2020-10-07       Impact factor: 4.036

8.  Controlling the orientation of nucleobases by dipole moment interaction with graphene/h-BN interfaces.

Authors:  Hakkim Vovusha; Rodrigo G Amorim; Ralph H Scheicher; Biplab Sanyal
Journal:  RSC Adv       Date:  2018-02-08       Impact factor: 4.036

9.  Inverted vortex fluidic exfoliation and scrolling of hexagonal-boron nitride.

Authors:  Ahmed Hussein Mohammed Al-Antaki; Xuan Luo; Thaar M D Alharbi; David P Harvey; Scott Pye; Jin Zou; Warren Lawrance; Colin L Raston
Journal:  RSC Adv       Date:  2019-07-16       Impact factor: 4.036

  9 in total

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