| Literature DB >> 21637516 |
Joanna Klos1, Elwira Sliwinska, Adam Kula, Hieronim Golczyk, Aleksandra Grabowska-Joachimiak, Tomasz Ilnicki, Krzysztof Szostek, Alan Stewart, Andrzej J Joachimiak.
Abstract
The subgenus Ceratochloa of the genus Bromus includes a number of closely related allopolyploid forms or species that present a difficult taxonomic problem. The present work combines data concerning chromosome length, heterochromatin distribution and nuclear genome size of different 6x, 8x and 12x accessions in this subgenus. Special attention is paid to the karyotype structure and genomic constitution of duodecaploid plants recently found in South America. Hexaploid lineages possess six almost indistinguishable genomes and a nuclear DNA content between 12.72 pg and 15.10 pg (mean 1Cx value = 2.32 pg), whereas octoploid lineages contain the same six genomes (AABBCC) plus two that are characterized by longer chromosomes and a greater DNA content (1Cx = 4.47 pg). Two duodecaploid accessions found in South America resemble each other and apparently differ from the North American duodecaploid B. arizonicus as regards chromosome size and nuclear DNA content (40.00 and 40.50 pg vs. 27.59 pg). These observations suggest that the South American duodecaploids represent a separate evolutionary lineage of the B. subgenus Ceratochloa, unrecognized heretofore.Entities:
Keywords: C-banding; flow cytometry; genome size; heterochromatin; karyotype
Year: 2009 PMID: 21637516 PMCID: PMC3036049 DOI: 10.1590/S1415-47572009005000046
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Provenance, chromosome number (ChN) and C-band distribution (CBD) of Bromus accessions.
| Place (access. number/cultivar) | Species | ChN | CBD | |
| CT1 | PI 202014, Argentinaa | 2n = 42 | t | |
| CT2 | BARENOcv, germplasm collected in Chile | 2n = 42 | t | |
| CT3 | ATOMcv, germplasm collected in NZ | 2n = 42 | t | |
| CT4 | GALAcv, germplasm collected in Chile | 2n = 42 | t | |
| CT5 | PI 409138, Roseberg Pass, South Africaa | 2n = 42* | t | |
| CT6 | Blue Mountains, Australiab | 2n = 42 | t | |
| CT7 | Christchurch, New Zealandb | 2n = 42 | t | |
| CT8 | Cb1061, Ethiopiab | 2n = 42** | t | |
| CT9 | Tas535, Chileb | 2n = 42 | ||
| CT10 | RGA30, Santa Cruz, Argentinab | 2n = 42 | t/nt | |
| CT11 | Mar del Plata, Argentinab | 2n = 42 | t | |
| CT12 | PI 306289, Boliviab | 2n = 42 | ||
| CT13 | Morelos, Zacatecas, Mexicob | 2n = 42 | t/nt | |
| CT14 | IAT509, McLean, Texas, USAb | 2n = 42 | ||
| CT15 | Tulcan, Ecuadorb | 2n = 42 | ||
| CT16 | PI 308506, Perub | 2n = 42 | t | |
| NB | Botanic garden origin | 2n = 42 | ||
| CT17 | #15, Oregon Coast, USAc | 2n = 56 | t | |
| CT18 | BROMAcv (J) | 2n = 56*** | t | |
| CT19 | #16, Fort Bragg, Oregon, USAc | 2n = 56 | t | |
| CT20 | PI 236755, British Columbia, Canadaa | 2n = 56 | ||
| CT21 | PI 469231, Cucamonga cv, USAa ( | 2n = 84 | t | |
| CT22 | Ecuador, Machachi, south of Quitob | undetermined | 2n = 84 | t |
| CT23 | Colombia, Bernardo, south of Bogotab | undetermined | 2n = 84 | t |
CT: subgen. Ceratochloa, NB - subgen. Neobromus
ChN: chromosome number; CBD - C-band distribution: t - majority of heterochromatin located terminally, t/nt - karyotypes with a considerable amount of non-terminally located heterochromatin, ne - not examined cv: commercial variety; a: USDA genebank; b: Alan Stewart (Christchurch, New Zealand) collection; no accession number; c: David Amme, California, USA collection.
(J): ChN and CBD determined by Joachimiak ; (carinatus) - commercial duodecaploid line sold under the name B. carinatus.
*: also 56, 65, 74, 82. **: also 28, 35. ***: chromosome number in root-tip cells highly unstable (Joachimiak ).
Chromosome length, heterochromatin amount, and nuclear DNA content in hexaploid Bromus subgen. Ceratochloa (B. catharticus sp. coll.) and B. trinii accessions. 1Cx - DNA content of one non-replicated monoploid genome with chromosome number x (according to Greilhuber ).
| Accession/species | Chromosome length min-max (μm) | Total length of karyotype (μm, mean ± SD) | Length of basal chromosome set (x) (μm) | Amount of heterochromatin (% of karyotype length) | 2C | 1Cx (pg) |
| [CT1] | 2.23-5.93 | 172.13 ± 12.72 | 28.69 | 4.76 ± 0.37 | 13.31 ± 0.20 | 2.22 |
| [CT2] | 3.05-6.20 | 184.85 ± 12.03 | 30.81 | 8.34 ± 0.68 | 14.35 ± 0.22 | 2.39 |
| [CT3] | 2.72-6.30 | 182.74 ± 8.28 | 30.46 | 4.34 ± 0.51 | 12.72 ± 0.08 | 2.12 |
| [CT4] | 2.55-6.30 | 171.39 ± 17.80 | 28.57 | 4.88 ± 0.76 | 13.79 ± 0.12 | 2.30 |
| [CT5] | 2.14-4.70 | 144.83 ± 7.53 | 24.14 | 6.56 ± 1.74 | 13.99 ± 0.19 | 2.33 |
| [CT6] | 2.73-7.12 | 195.60 ± 15.26 | 32.60 | 8.00 ± 0.58 | 14.04 ± 0.15 | 2.34 |
| [CT7] | 2.52-5.89 | 188.99 ± 7.29 | 28.16 | 5.34 ± 0.31 | 13.98 ± 0.18 | 2.33 |
| [CT8] | 3.37-6.15 | 191.10 ± 2.67 | 31.85 | 9.59 ± 1.89 | 15.10 ± 0.22 | 2.52 |
| mean ± SD | 178.95 ± 16.22 | 29.41 ± 2.67 | 6.48 ± 1.96 | 13.91 ± 0.70 | 2.32 ± 0.12 | |
| [NB] | 2.90-6.56 | 186.80 ± 18.27 | 31.13 | (-) | 12.52 ± 0.19 | 2.09 |
Figure 1Metaphase chromosomes in four different American lines of Bromus subgen. Ceratochloa. a - hexaploid B. willdenowii cv. Atom [CT3], b - octoploid B. marginatus [CT20], c -duodecaploid B. arizonicus [CT21], d - duodecaploid from Machachi (Ecuador) [CT22]. Note the presence of longer chromosomes in CT20 and CT 22. [] indicates origin of Bromus samples (see Table 1). Scale bar = 5 μm.
Figure 2C-banded chromosomes of different hexaploid (a-d), octoploid (e) and duodecaploid (f) lines of Bromus subgen. Ceratochloa. a - [CT3], b - [CT5], c - [CT8], d - [CT10], e - [CT17], f - [CT22] (metaphase fragment). [] indicates the origin of Bromus samples (see Table 1). Scale bar = 5 μm.
Figure 3Histograms of fluorescence intensities of nuclei isolated from the leaves of different lines of Bromus subgen. Ceratochloa (peak 2) stained simultaneously with the nuclei of Pisum sativum (internal standard; peak 1) by using propidium iodide. a - hexaploid [CT8], b - octoploid [CT19], c - North American duodecaploid [CT21], d - South American duodecaploid [CT23]. [] indicates origin of Bromus samples (see Table 1).
Figure 4Regression of 2C DNA value (in pg) on heterochromatin amount (in % of karyotype length) in eight hexaploid species; linear model represents statistical dependence between the analysed variables (p = 0.043, r = 0.877, r2 = 79.6%).
Chromosome length and nuclear DNA content in octoploid and duodecaploid accessions. AD - amount of DNA in two additional (octoploid) and six additional (duodecaploid) genomes, calculated as measured 2C DNA amount minus average 2C DNA amount of hexaploid Bromus subgen. Ceratochloa (B. catharticus sp. coll.) complement.
| Accession/species | Chromosome length min-max (μm) | Total length of karyotype (t) (μm, mean ± SD) | 2C (pg, mean ± SD) | AD (pg) |
| [CT17] | 2.47-8.37 | 259.64 ± 12.20 | (-) | (-) |
| [CT18] | 2.07-8.74 | 254.68 ± 23.27 | 22.94 ± 0.42* | 9.03 |
| [CT19] | 2.09-7.84 | 231.24 ± 25.38 | 22.97 ± 0.24 | 9.06 |
| [CT20] | 2.25-7.96 | 238.85 ± 21.97 | 22.66 ± 0.56 | 8.75 |
| Mean ± SD | 246.10 ± 13.30 | 22.86 ± 0.17 | 8.95 ± 0.17 | |
| [CT21] | 2.07-6.24 | 333.97 ± 21.54 | 27.59 ± 0.22 | 13.68 |
| [CT22] undetermined | 2.25-10.74 | 436.13 ± 8.67 | 40.50 ± 0.73 | 26.59 |
| [CT23] undetermined | 2.36-9.87 | 451.01 ± 29.76 | 40.00 ± 0.77 | 26.09 |
*According to Joachimiak .
Figure 5Chromosome size distribution in chromosome collections of hexa-, octo- and duodecaploid Bromus subgenus Ceratochloa. a - figure shows summary statistics for central tendency and variability of chromosome lengths, and displays the usual estimates of means and standard deviation, b - mosaic chart showing the frequency of medium-sized (black) and long (grey) chromosomes in four different lineages. ChL - chromosome length (μm), StDev - standard deviation, Row number - number of analyzed chromosomes (cumulatively), NA - North American duodecaploid [CT21], SA - South American duodecaploids [CT22, CT23]. Sample mean = 4.38, std. deviation = 1.23.