Literature DB >> 21633788

QSAR model toward the rational design of new agrochemical fungicides with a defined resistance risk using substructural descriptors.

Alejandro Speck-Planche1, Valeria V Kleandrova, Julio A Rojas-Vargas.   

Abstract

The increasing resistance of several phytopathogenic fungal species to the existing agrochemical fungicides has alarmed to the worldwide scientific community. There is no available methodology to predict in an efficient way if a new fungicide will have resistance risk due to fungal species which cause considerable crop losses. In an attempt to overcome this problem, a multi-resistance risk QSAR model, based on substructural descriptors was developed from a heterogeneous database of compounds. The purpose of this model is the classification, design, and prediction of agrochemical fungicides according to resistance risk categories. The QSAR model classified correctly 85.11% of the fungicides and the 85.07% of the inactive compounds in the training series, for an accuracy of 85.08%. In the prediction series, the percentages of correct classification were 85.71 and 86.55% for fungicides and inactive compounds, respectively, with an accuracy of 86.39%. Some fragments were extracted and their quantitative contributions to the fungicidal activity were calculated taking into consideration the different resistance risk categories for agrochemical fungicides. In the same way, some fragments present in molecules with fungicidal activity and with negative contributions were analyzed like structural alerts responsible of resistance risk.

Mesh:

Substances:

Year:  2011        PMID: 21633788     DOI: 10.1007/s11030-011-9320-7

Source DB:  PubMed          Journal:  Mol Divers        ISSN: 1381-1991            Impact factor:   2.943


  25 in total

1.  Quantitative structure--toxicity relationships using TOPS-MODE. 1. Nitrobenzene toxicity to Tetrahymena pyriformis.

Authors:  E Estrada; E Uriarte
Journal:  SAR QSAR Environ Res       Date:  2001       Impact factor: 3.000

2.  Modeling chromatographic parameters by a novel graph theoretical sub-structural approach.

Authors:  E Estrada; Y Gutierrez
Journal:  J Chromatogr A       Date:  1999-10-15       Impact factor: 4.759

3.  Creating molecular diversity from antioxidants in Brazilian propolis. Combination of TOPS-MODE QSAR and virtual structure generation.

Authors:  Ernesto Estrada; Jose A Quincoces; Grace Patlewicz
Journal:  Mol Divers       Date:  2004       Impact factor: 2.943

Review 4.  Ligand-based computer-aided discovery of tyrosinase inhibitors. Applications of the TOMOCOMD-CARDD method to the elucidation of new compounds.

Authors:  Yovani Marrero-Ponce; Gerardo M Casañola-Martín; Mahmud Tareq Hassan Khan; Francisco Torrens; Antonio Rescigno; Concepción Abad
Journal:  Curr Pharm Des       Date:  2010       Impact factor: 3.116

5.  Design of novel antituberculosis compounds using graph-theoretical and substructural approaches.

Authors:  Alejandro Speck Planche; Marcus Tulius Scotti; América García López; Vicente de Paulo Emerenciano; Enrique Molina Pérez; Eugenio Uriarte
Journal:  Mol Divers       Date:  2009-04-02       Impact factor: 2.943

6.  Prediction of enzyme classes from 3D structure: a general model and examples of experimental-theoretic scoring of peptide mass fingerprints of Leishmania proteins.

Authors:  Riccardo Concu; Maria A Dea-Ayuela; Lazaro G Perez-Montoto; Francisco Bolas-Fernández; Francisco J Prado-Prado; Gianni Podda; Eugenio Uriarte; Florencio M Ubeira; Humberto González-Díaz
Journal:  J Proteome Res       Date:  2009-09       Impact factor: 4.466

7.  A novel approach for the virtual screening and rational design of anticancer compounds.

Authors:  E Estrada; E Uriarte; A Montero; M Teijeira; L Santana; E De Clercq
Journal:  J Med Chem       Date:  2000-05-18       Impact factor: 7.446

8.  Multi-target spectral moment QSAR versus ANN for antiparasitic drugs against different parasite species.

Authors:  Francisco J Prado-Prado; Xerardo García-Mera; Humberto González-Díaz
Journal:  Bioorg Med Chem       Date:  2010-02-06       Impact factor: 3.641

9.  Quantitative structure carcinogenicity relationship for detecting structural alerts in nitroso-compounds.

Authors:  Aliuska Morales Helguera; Maykel Pérez González; Maria Natália D S Cordeiro; Miguel Angel Cabrera Pérez
Journal:  Toxicol Appl Pharmacol       Date:  2007-03-15       Impact factor: 4.219

Review 10.  Review of strobilurin fungicide chemicals.

Authors:  Hamdy Balba
Journal:  J Environ Sci Health B       Date:  2007-05       Impact factor: 1.990

View more
  5 in total

1.  Combined molecular docking and QSAR study of fused heterocyclic herbicide inhibitors of D1 protein in photosystem II of plants.

Authors:  Simona Funar-Timofei; Ana Borota; Luminita Crisan
Journal:  Mol Divers       Date:  2017-03-16       Impact factor: 2.943

2.  X-ray Crystallography-Guided Design, Antitumor Efficacy, and QSAR Analysis of Metabolically Stable Cyclopenta-Pyrimidinyl Dihydroquinoxalinone as a Potent Tubulin Polymerization Inhibitor.

Authors:  Souvik Banerjee; Foyez Mahmud; Shanshan Deng; Lingling Ma; Mi-Kyung Yun; Sayo O Fakayode; Kinsie E Arnst; Lei Yang; Hao Chen; Zhongzhi Wu; Pradeep B Lukka; Keyur Parmar; Bernd Meibohm; Stephen W White; Yuxi Wang; Wei Li; Duane D Miller
Journal:  J Med Chem       Date:  2021-08-18       Impact factor: 8.039

3.  Fragment-based optimization of small molecule CXCL12 inhibitors for antagonizing the CXCL12/CXCR4 interaction.

Authors:  Joshua J Ziarek; Yan Liu; Emmanuel Smith; Guolin Zhang; Francis C Peterson; Jun Chen; Yongping Yu; Yu Chen; Brian F Volkman; Rongshi Li
Journal:  Curr Top Med Chem       Date:  2012       Impact factor: 3.295

4.  Molecular modelling guided design, synthesis and QSAR analysis of new small molecule non-lipid autotaxin inhibitors.

Authors:  Souvik Banerjee; Derek D Norman; Shanshan Deng; Sayo O Fakayode; Sue Chin Lee; Abby L Parrill; Wei Li; Duane D Miller; Gabor J Tigyi
Journal:  Bioorg Chem       Date:  2020-08-26       Impact factor: 5.275

5.  Combined Machine Learning and Molecular Modelling Workflow for the Recognition of Potentially Novel Fungicides.

Authors:  Ozren Jović; Tomislav Šmuc
Journal:  Molecules       Date:  2020-05-08       Impact factor: 4.411

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.