Literature DB >> 21632820

RNAi in Xenopus: look before you leap.

Alex S Flynt1, Eric C Lai.   

Abstract

RNAi has revolutionized reverse genetics; however, RNAi is not necessarily ubiquitous or constitutive. Lund and colleagues (pp. 1121-1131) show that microRNA (miRNA) effector Argonautes (Agos) are limiting and easily saturated during early Xenopus embryogenesis. Moreover, this stage is devoid of slicing capacity. Supplementation of Ago proteins rescued endogenous miRNA activity in the presence of exogenous siRNAs, and, excitingly, ectopic Ago2 could now support RNAi in Xenopus. These observations may potentially facilitate RNAi in other recalcitrant model organisms.

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Year:  2011        PMID: 21632820      PMCID: PMC3110948          DOI: 10.1101/gad.2062911

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  39 in total

1.  Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes.

Authors:  Oliver H Tam; Alexei A Aravin; Paula Stein; Angelique Girard; Elizabeth P Murchison; Sihem Cheloufi; Emily Hodges; Martin Anger; Ravi Sachidanandam; Richard M Schultz; Gregory J Hannon
Journal:  Nature       Date:  2008-04-10       Impact factor: 49.962

2.  Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes.

Authors:  Toshiaki Watanabe; Yasushi Totoki; Atsushi Toyoda; Masahiro Kaneda; Satomi Kuramochi-Miyagawa; Yayoi Obata; Hatsune Chiba; Yuji Kohara; Tomohiro Kono; Toru Nakano; M Azim Surani; Yoshiyuki Sakaki; Hiroyuki Sasaki
Journal:  Nature       Date:  2008-04-10       Impact factor: 49.962

3.  Abundant and dynamically expressed miRNAs, piRNAs, and other small RNAs in the vertebrate Xenopus tropicalis.

Authors:  Javier Armisen; Michael J Gilchrist; Anna Wilczynska; Nancy Standart; Eric A Miska
Journal:  Genome Res       Date:  2009-07-23       Impact factor: 9.043

4.  Deadenylation of maternal mRNAs mediated by miR-427 in Xenopus laevis embryos.

Authors:  Elsebet Lund; Mingzhu Liu; Rebecca S Hartley; Michael D Sheets; James E Dahlberg
Journal:  RNA       Date:  2009-10-23       Impact factor: 4.942

5.  A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity.

Authors:  Daniel Cifuentes; Huiling Xue; David W Taylor; Heather Patnode; Yuichiro Mishima; Sihem Cheloufi; Enbo Ma; Shrikant Mane; Gregory J Hannon; Nathan D Lawson; Scot A Wolfe; Antonio J Giraldez
Journal:  Science       Date:  2010-05-06       Impact factor: 47.728

6.  A dicer-independent miRNA biogenesis pathway that requires Ago catalysis.

Authors:  Sihem Cheloufi; Camila O Dos Santos; Mark M W Chong; Gregory J Hannon
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

7.  MicroRNA function is globally suppressed in mouse oocytes and early embryos.

Authors:  Nayoung Suh; Lauren Baehner; Felix Moltzahn; Collin Melton; Archana Shenoy; Jing Chen; Robert Blelloch
Journal:  Curr Biol       Date:  2010-01-28       Impact factor: 10.834

8.  MicroRNA activity is suppressed in mouse oocytes.

Authors:  Jun Ma; Matyas Flemr; Paula Stein; Philipp Berninger; Radek Malik; Mihaela Zavolan; Petr Svoboda; Richard M Schultz
Journal:  Curr Biol       Date:  2010-01-28       Impact factor: 10.834

Review 9.  The use of antisense oligonucleotides in Xenopus oocytes.

Authors:  Alissa M Hulstrand; Patricia N Schneider; Douglas W Houston
Journal:  Methods       Date:  2010-01-05       Impact factor: 3.608

10.  Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs.

Authors:  Aly A Khan; Doron Betel; Martin L Miller; Chris Sander; Christina S Leslie; Debora S Marks
Journal:  Nat Biotechnol       Date:  2009-06       Impact factor: 54.908

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