Literature DB >> 21628990

The role of promoter methylation in Epstein-Barr virus (EBV) microRNA expression in EBV-infected B cell lines.

Do Nyun Kim1, Yoon Jae Song, Suk Kyeong Lee.   

Abstract

Epstein-Barr virus (EBV) microRNAs (miRNAs) are expressed in EBV-associated tumors and cell lines, but the regulation mechanism of their expression is unclear yet. We investigated whether the expression of EBV miRNAs is epigenetically regulated in EBV-infected B cell lines. The expression of BART miRNAs was inversely related with the methylation level of the BART promoter at both steady-state and following 5-aza-2'-deoxycytidine treatment of the cells. The expression of BHRF1 miRNAs also became detectable with the demethylation of Cp/Wp in latency I EBV-infected cell lines. Furthermore, in vitro methylation of the BART and Cp promoters reduced the promoter-driven transactivation. In contrast, tricostatin A had little effect on the expression of EBV miRNA expression as well as on the BART and Cp/Wp promoters. Our results suggest that promoter methylation, but not histone acetylation, plays a role in regulation of the EBV miRNA expression in EBV-infected B cell lines.

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Year:  2011        PMID: 21628990      PMCID: PMC3158499          DOI: 10.3858/emm.2011.43.7.044

Source DB:  PubMed          Journal:  Exp Mol Med        ISSN: 1226-3613            Impact factor:   8.718


  55 in total

1.  Structure and coding content of CST (BART) family RNAs of Epstein-Barr virus.

Authors:  P R Smith; O de Jesus; D Turner; M Hollyoake; C E Karstegl; B E Griffin; L Karran; Y Wang; S D Hayward; P J Farrell
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

Review 2.  Pathogenic roles for Epstein-Barr virus (EBV) gene products in EBV-associated proliferative disorders.

Authors:  Jaap M Middeldorp; Antoinette A T P Brink; Adriaan J C van den Brule; Chris J L M Meijer
Journal:  Crit Rev Oncol Hematol       Date:  2003-01       Impact factor: 6.312

3.  Updated Epstein-Barr virus (EBV) DNA sequence and analysis of a promoter for the BART (CST, BARF0) RNAs of EBV.

Authors:  Orlando de Jesus; Paul R Smith; Lindsay C Spender; Claudio Elgueta Karstegl; Hans Helmut Niller; Dolly Huang; Paul J Farrell
Journal:  J Gen Virol       Date:  2003-06       Impact factor: 3.891

4.  In vivo transcription of the Epstein-Barr virus (EBV) BamHI-A region without associated in vivo BARF0 protein expression in multiple EBV-associated disorders.

Authors:  Josine van Beek; Antoinette A T P Brink; Marcel B H J Vervoort; Mireille J M van Zijp; Chris J L M Meijer; Adriaan J C van den Brule; Jaap M Middeldorp
Journal:  J Gen Virol       Date:  2003-10       Impact factor: 3.891

5.  Identification of virus-encoded microRNAs.

Authors:  Sébastien Pfeffer; Mihaela Zavolan; Friedrich A Grässer; Minchen Chien; James J Russo; Jingyue Ju; Bino John; Anton J Enright; Debora Marks; Chris Sander; Thomas Tuschl
Journal:  Science       Date:  2004-04-30       Impact factor: 47.728

Review 6.  Epstein-Barr virus complementary strand transcripts (CSTs/BARTs) and cancer.

Authors:  P Smith
Journal:  Semin Cancer Biol       Date:  2001-12       Impact factor: 15.707

Review 7.  Stealth technology: how Epstein-Barr virus utilizes DNA methylation to cloak itself from immune detection.

Authors:  Qian Tao; Keith D Robertson
Journal:  Clin Immunol       Date:  2003-10       Impact factor: 3.969

Review 8.  Host cell-dependent expression of latent Epstein-Barr virus genomes: regulation by DNA methylation.

Authors:  Hul Li; Janos Minarovits
Journal:  Adv Cancer Res       Date:  2003       Impact factor: 6.242

Review 9.  Many roads to maturity: microRNA biogenesis pathways and their regulation.

Authors:  Julia Winter; Stephanie Jung; Sarina Keller; Richard I Gregory; Sven Diederichs
Journal:  Nat Cell Biol       Date:  2009-03       Impact factor: 28.824

10.  Methylation-dependent binding of the epstein-barr virus BZLF1 protein to viral promoters.

Authors:  Sarah J Dickerson; Yongna Xing; Amanda R Robinson; William T Seaman; Henri Gruffat; Shannon C Kenney
Journal:  PLoS Pathog       Date:  2009-03-27       Impact factor: 6.823

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  13 in total

Review 1.  EBV Noncoding RNAs.

Authors:  Rebecca L Skalsky; Bryan R Cullen
Journal:  Curr Top Microbiol Immunol       Date:  2015       Impact factor: 4.291

Review 2.  The role of miRNAs and EBV BARTs in NPC.

Authors:  Aron R Marquitz; Nancy Raab-Traub
Journal:  Semin Cancer Biol       Date:  2011-12-10       Impact factor: 15.707

3.  A novel persistence associated EBV miRNA expression profile is disrupted in neoplasia.

Authors:  Jin Qiu; Katherine Cosmopoulos; Michiel Pegtel; Erik Hopmans; Paul Murray; Jaap Middeldorp; Michael Shapiro; David A Thorley-Lawson
Journal:  PLoS Pathog       Date:  2011-08-25       Impact factor: 6.823

4.  Expression of BamHI-A Rightward Transcripts in Epstein-Barr Virus-Associated Gastric Cancers.

Authors:  Bo-Gun Jang; Eun Ji Jung; Woo Ho Kim
Journal:  Cancer Res Treat       Date:  2011-12-27       Impact factor: 4.679

5.  CpG methylation at GATA elements in the regulatory region of CCR3 positively correlates with CCR3 transcription.

Authors:  Tae Gi Uhm; Seol Kyung Lee; Byung Soo Kim; Jin Hyun Kang; Choon Sik Park; Tai Youn Rhim; Hun Soo Chang; Do Jin Kim; Il Yup Chung
Journal:  Exp Mol Med       Date:  2012-04-30       Impact factor: 8.718

Review 6.  Genetics and Molecular Biology of Epstein-Barr Virus-Encoded BART MicroRNA: A Paradigm for Viral Modulation of Host Immune Response Genes and Genome Stability.

Authors:  David H Dreyfus
Journal:  J Immunol Res       Date:  2017-04-28       Impact factor: 4.818

Review 7.  The Role of Epigenetic Regulation in Epstein-Barr Virus-Associated Gastric Cancer.

Authors:  Jun Nishikawa; Hisashi Iizasa; Hironori Yoshiyama; Munetaka Nakamura; Mari Saito; Sho Sasaki; Kanami Shimokuri; Masashi Yanagihara; Kouhei Sakai; Yutaka Suehiro; Takahiro Yamasaki; Isao Sakaida
Journal:  Int J Mol Sci       Date:  2017-07-25       Impact factor: 5.923

8.  Base-pair resolution DNA methylome of the EBV-positive Endemic Burkitt lymphoma cell line DAUDI determined by SOLiD bisulfite-sequencing.

Authors:  B Kreck; J Richter; O Ammerpohl; M Barann; D Esser; B S Petersen; I Vater; E M Murga Penas; C A Bormann Chung; S Seisenberger; V Lee Boyd; S Smallwood; H G Drexler; R A F Macleod; M Hummel; F Krueger; R Häsler; S Schreiber; P Rosenstiel; A Franke; R Siebert
Journal:  Leukemia       Date:  2013-01-11       Impact factor: 11.528

9.  NF-κB Signaling Regulates Expression of Epstein-Barr Virus BART MicroRNAs and Long Noncoding RNAs in Nasopharyngeal Carcinoma.

Authors:  Rob J A Verhoeven; Shuang Tong; Gaohong Zhang; Jingfeng Zong; Yixin Chen; Dong-Yan Jin; Mei-Ru Chen; Jianji Pan; Honglin Chen
Journal:  J Virol       Date:  2016-06-24       Impact factor: 5.103

Review 10.  Herpesviral microRNAs in Cellular Metabolism and Immune Responses.

Authors:  Hyoji Kim; Hisashi Iizasa; Yuichi Kanehiro; Sintayehu Fekadu; Hironori Yoshiyama
Journal:  Front Microbiol       Date:  2017-07-18       Impact factor: 5.640

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