Literature DB >> 21620930

Traffic optimization in railroad networks using an algorithm mimicking an amoeba-like organism, Physarum plasmodium.

Shin Watanabe1, Atsushi Tero, Atsuko Takamatsu, Toshiyuki Nakagaki.   

Abstract

Traffic optimization of railroad networks was considered using an algorithm that was biologically inspired by an amoeba-like organism, plasmodium of the true slime mold, Physarum polycephalum. The organism developed a transportation network consisting of a tubular structure to transport protoplasm. It was reported that plasmodium can find the shortest path interconnecting multiple food sites during an adaptation process (Nakagaki et al., 2001. Biophys. Chem. 92, 47-52). By mimicking the adaptation process a path finding algorithm was developed by Tero et al. (2007). In this paper, the algorithm is newly modified for applications of traffic distribution optimization in transportation networks of infrastructure such as railroads under the constraint that the network topology is given. Application of the algorithm to a railroad in metropolitan Tokyo, Japan is demonstrated. The results are evaluated using three performance functions related to cost, traveling efficiency, and network weakness. The traffic distribution suggests that the modified Physarum algorithm balances the performances under a certain parameter range, indicating a biological process.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

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Year:  2011        PMID: 21620930     DOI: 10.1016/j.biosystems.2011.05.001

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  6 in total

1.  PhysarumSpreader: A New Bio-Inspired Methodology for Identifying Influential Spreaders in Complex Networks.

Authors:  Hongping Wang; Yajuan Zhang; Zili Zhang; Sankaran Mahadevan; Yong Deng
Journal:  PLoS One       Date:  2015-12-18       Impact factor: 3.240

2.  Transportation network with fluctuating input/output designed by the bio-inspired Physarum algorithm.

Authors:  Shin Watanabe; Atsuko Takamatsu
Journal:  PLoS One       Date:  2014-02-26       Impact factor: 3.240

Review 3.  Algorithms in nature: the convergence of systems biology and computational thinking.

Authors:  Saket Navlakha; Ziv Bar-Joseph
Journal:  Mol Syst Biol       Date:  2011-11-08       Impact factor: 11.429

4.  A bio-inspired method for the constrained shortest path problem.

Authors:  Hongping Wang; Xi Lu; Xiaoge Zhang; Qing Wang; Yong Deng
Journal:  ScientificWorldJournal       Date:  2014-05-14

5.  A model for simulating emergent patterns of cities and roads on real-world landscapes.

Authors:  Takaaki Aoki; Naoya Fujiwara; Mark Fricker; Toshiyuki Nakagaki
Journal:  Sci Rep       Date:  2022-06-16       Impact factor: 4.996

6.  Complex population dynamics in a spatial microbial ecosystem with Physarum polycephalum.

Authors:  Leo Epstein; Zeth Dubois; Jessica Smith; Yunha Lee; Kyle Harrington
Journal:  Biosystems       Date:  2021-07-14       Impact factor: 1.957

  6 in total

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