Literature DB >> 2161515

Functional analysis of the Bacillus subtilis bacteriophage SPP1 pac site.

A Bravo1, J C Alonso, T A Trautner.   

Abstract

Encapsidation of the DNA of the virulent Bacillus subtilis phage SPP1 follows a processive unidirectional headful-mechanism and initiates at a unique genomic location (pac). We have cloned a fragment of SPP1 DNA containing the pac site flanked by reporter genes into the chromosome of B. subtilis. Infection of such cells with SPP1 led to highly efficient packaging, initiated at the inserted pac site, of chromosomal DNA. The directionality in the packaging of this DNA was the same as observed with vegetative phage DNA. Mutagenizing the chromosomal pac insert defined an 83 base pair segment containing the pac cleavage site which is sufficient to direct phage specific DNA encapsidation. The packaging recognition signal as defined can also be utilized by the SPP1 related phages 41c, SF6 and rho 15.

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Year:  1990        PMID: 2161515      PMCID: PMC330814          DOI: 10.1093/nar/18.10.2881

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  21 in total

1.  The genome of Bacillus subtilis phage SPP1: the arrangement of restriction endonuclease generated fragments.

Authors:  S W Ratcliff; J Luh; A T Ganesan; B Behrens; R Thompson; M A Montenegro; G Morelli; T A Trautner
Journal:  Mol Gen Genet       Date:  1979-01-10

2.  Physical properties of the DNA of bacteriophage SP50.

Authors:  N Biswal; A K Kleinschmidt; H C Spatz; T A Trautner
Journal:  Mol Gen Genet       Date:  1967

3.  Recognition and cleavage of the bacteriophage P1 packaging site (pac). I. Differential processing of the cleaved ends in vivo.

Authors:  N Sternberg; J Coulby
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

4.  Homology between phages SPP1, 41c, 22a, rho 15 and SF6 of Bacillus subtilis.

Authors:  M A Santos; H De Lencastre; L J Archer
Journal:  J Gen Virol       Date:  1984-11       Impact factor: 3.891

5.  Uncoupling of initiation site cleavage from subsequent headful cleavages in bacteriophage T1 DNA packaging.

Authors:  N Ramsey; D A Ritchie
Journal:  Nature       Date:  1983-01-20       Impact factor: 49.962

6.  Genetic and transfection studies with B, subtilis phage SP 50. I. Phage mutants with restricted growth on B. subtilis strain 168.

Authors:  E Rottländer; T A Trautner
Journal:  Mol Gen Genet       Date:  1970

7.  Genome of Bacillus subtilis Bacteriophage SPP1: Structure and Nucleotide Sequence of pac, the Origin of DNA Packaging.

Authors:  I Deichelbohrer; W Messer; T A Trautner
Journal:  J Virol       Date:  1982-04       Impact factor: 5.103

8.  Initiation of bacteriophage P22 DNA packaging series. Analysis of a mutant that alters the DNA target specificity of the packaging apparatus.

Authors:  S Casjens; W M Huang; M Hayden; R Parr
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

9.  Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistance.

Authors:  S Horinouchi; B Weisblum
Journal:  J Bacteriol       Date:  1982-05       Impact factor: 3.490

10.  DNA packaging initiation of Salmonella bacteriophage P22: determination of cut sites within the DNA sequence coding for gene 3.

Authors:  H Backhaus
Journal:  J Virol       Date:  1985-08       Impact factor: 5.103

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  17 in total

1.  Structure of p22 headful packaging nuclease.

Authors:  Ankoor Roy; Gino Cingolani
Journal:  J Biol Chem       Date:  2012-06-19       Impact factor: 5.157

Review 2.  Recombination-dependent concatemeric plasmid replication.

Authors:  J F Viret; A Bravo; J C Alonso
Journal:  Microbiol Rev       Date:  1991-12

3.  The generation of concatemeric plasmid DNA in Bacillus subtilis as a consequence of bacteriophage SPP1 infection.

Authors:  A Bravo; J C Alonso
Journal:  Nucleic Acids Res       Date:  1990-08-25       Impact factor: 16.971

4.  Distamycin-induced inhibition of formation of a nucleoprotein complex between the terminase small subunit G1P and the non-encapsidated end (pacL site) of Bacillus subtilis bacteriophage SPP1.

Authors:  S Chai; J C Alsonso
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

5.  A genetic approach to the identification of functional amino acids in protein p6 of Bacillus subtilis phage phi 29.

Authors:  A Bravo; J M Hermoso; M Salas
Journal:  Mol Gen Genet       Date:  1994-12-01

6.  The 1.58 Å resolution structure of the DNA-binding domain of bacteriophage SF6 small terminase provides new hints on DNA binding.

Authors:  Stefano Benini; Maria Chechik; Miguel Ortiz Lombardía; Sigrun Polier; Andrew Leech; Mikhail B Shevtsov; Juan C Alonso
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-03-28

7.  Compartmentalization of phage phi29 DNA replication: interaction between the primer terminal protein and the membrane-associated protein p1.

Authors:  A Bravo; B Illana; M Salas
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

8.  Polymerization of bacteriophage phi 29 replication protein p1 into protofilament sheets.

Authors:  A Bravo; M Salas
Journal:  EMBO J       Date:  1998-10-15       Impact factor: 11.598

9.  Genomic and proteomic analyses of the terminally redundant genome of the Pseudomonas aeruginosa phage PaP1: establishment of genus PaP1-like phages.

Authors:  Shuguang Lu; Shuai Le; Yinling Tan; Junmin Zhu; Ming Li; Xiancai Rao; Lingyun Zou; Shu Li; Jing Wang; Xiaolin Jin; Guangtao Huang; Lin Zhang; Xia Zhao; Fuquan Hu
Journal:  PLoS One       Date:  2013-05-13       Impact factor: 3.240

10.  The nuclease domain of the SPP1 packaging motor coordinates DNA cleavage and encapsidation.

Authors:  Charlène Cornilleau; Noureddine Atmane; Eric Jacquet; Callum Smits; Juan C Alonso; Paulo Tavares; Leonor Oliveira
Journal:  Nucleic Acids Res       Date:  2012-10-30       Impact factor: 16.971

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