Literature DB >> 21613157

Microsatellite primers in red bayberry, Myrica rubra (Myricaceae).

Xiaobo Xie1, Yingying Qiu, Liping Ke, Xiliang Zheng, Guanting Wu, Jinqing Chen, Xingjiang Qi, Sangnag Ahn.   

Abstract

PREMISE OF THE STUDY: Microsatellite markers were developed in Myrica rubra to investigate potential hybridization events within or between M. rubra and its closely related species. METHODS AND
RESULTS: Using an ISSR-suppression PCR method, 12 primer pairs were temporarily developed with GSG(GT)(6) as the primer for enriching microsatellite sequences and the genomic DNA of M. rubra cv. 'Heijing' as template. The average allele number per locus was 4.9 within 26 individuals including two species, M. rubra and M. nana. Three pairs of primers produced species-specific alleles, and the other nine showed polymorphisms among 26 accessions.
CONCLUSIONS: Results indicated that the ISSR-suppression PCR method is suitable for developing microsatellite markers, especially for this species with little understanding of genomic information. The developed microsatellite markers provide a useful tool for further studies of population structure within or between M. rubra and M. nana or other closely related species.

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Year:  2011        PMID: 21613157     DOI: 10.3732/ajb.1000271

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  4 in total

1.  Development and characterization of microsatellite markers in sawih tree (Duabanga moluccana Blume) using ISSR-suppression PCR techniques.

Authors:  Kit-Siong Liew; Wei-Seng Ho; Shek-Ling Pang; Abdullah Julaihi
Journal:  Physiol Mol Biol Plants       Date:  2014-09-24

2.  Development of simple sequence repeat (SSR) markers from a genome survey of Chinese bayberry (Myrica rubra).

Authors:  Yun Jiao; Hui-min Jia; Xiong-wei Li; Ming-liang Chai; Hui-juan Jia; Zhe Chen; Guo-yun Wang; Chun-yan Chai; Eric van de Weg; Zhong-shan Gao
Journal:  BMC Genomics       Date:  2012-05-23       Impact factor: 3.969

3.  Phylogeny of Morella rubra and Its Relatives (Myricaceae) and Genetic Resources of Chinese Bayberry Using RAD Sequencing.

Authors:  Luxian Liu; Xinjie Jin; Nan Chen; Xian Li; Pan Li; Chengxin Fu
Journal:  PLoS One       Date:  2015-10-02       Impact factor: 3.240

4.  Biological analysis on extractives of bayberry fresh flesh by GC-MS.

Authors:  Shengbo Ge; Lishu Wang; Jiaojiao Ma; Shuaicheng Jiang; Wanxi Peng
Journal:  Saudi J Biol Sci       Date:  2017-09-23       Impact factor: 4.219

  4 in total

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