Literature DB >> 21607996

Towards cracking the epigenetic code using a combination of high-throughput epigenomics and quantitative mass spectrometry-based proteomics.

Hendrik G Stunnenberg1, Michiel Vermeulen.   

Abstract

High-throughput genomic sequencing and quantitative mass spectrometry (MS)-based proteomics technology have recently emerged as powerful tools, increasing our understanding of chromatin structure and function. Both of these approaches require substantial investments and expertise in terms of instrumentation, experimental methodology, bioinformatics, and data interpretation and are, therefore, usually applied independently from each other by dedicated research groups. However, when applied reiteratively in the context of epigenetics research these approaches are strongly synergistic in nature.
Copyright © 2011 WILEY Periodicals, Inc.

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Year:  2011        PMID: 21607996     DOI: 10.1002/bies.201100044

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  7 in total

1.  Epigenetic Regulation in Breast Cancer.

Authors:  Hye Jin Nam; Sung Hee Baek
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 2.  Combining genomic and proteomic approaches for epigenetics research.

Authors:  Yumiao Han; Benjamin A Garcia
Journal:  Epigenomics       Date:  2013-08       Impact factor: 4.778

Review 3.  Cancer genomics identifies disrupted epigenetic genes.

Authors:  Laia Simó-Riudalbas; Manel Esteller
Journal:  Hum Genet       Date:  2013-10-09       Impact factor: 4.132

Review 4.  Exploiting the Epigenome to Control Cancer-Promoting Gene-Expression Programs.

Authors:  Gerard L Brien; Daria G Valerio; Scott A Armstrong
Journal:  Cancer Cell       Date:  2016-04-11       Impact factor: 31.743

5.  Proteomic technologies for the study of osteosarcoma.

Authors:  Stephanie D Byrum; Charity L Washam; Corey O Montgomery; Alan J Tackett; Larry J Suva
Journal:  Sarcoma       Date:  2012-03-06

6.  Mass spectrometry-based proteomics for the analysis of chromatin structure and dynamics.

Authors:  Monica Soldi; Alessandro Cuomo; Michael Bremang; Tiziana Bonaldi
Journal:  Int J Mol Sci       Date:  2013-03-06       Impact factor: 5.923

Review 7.  Genomics meets proteomics: identifying the culprits in disease.

Authors:  Hendrik G Stunnenberg; Nina C Hubner
Journal:  Hum Genet       Date:  2013-10-18       Impact factor: 4.132

  7 in total

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