Literature DB >> 21598904

Chemical, thermal, and electric field induced unfolding of single protein molecules studied using nanopores.

Kevin J Freedman1, Maike Jürgens, Anmiv Prabhu, Chi Won Ahn, Per Jemth, Joshua B Edel, Min Jun Kim.   

Abstract

Single-molecule experimental techniques have recently shown to be of significant interest for use in numerous applications in both the research laboratory and industrial settings. Although many single-molecule techniques exist, the nanopore platform is perhaps one of the more popular techniques due to its ability to act as a molecular sensor of biological macromolecules. For example, nanopores offer a unique, new method for probing various properties of proteins and can contribute to elucidating key biophysical information in conjunction with existing techniques. In the present study, various forms of bovine serum albumin (BSA) are detected including thermally refolded BSA, urea-denatured BSA, and multiple forms of BSA detected at elevated electric field strengths (with and without urea). We also provide excluded volume measurements for each of these states that normally are difficult to obtain due to unknown and unstable protein conformations.

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Year:  2011        PMID: 21598904     DOI: 10.1021/ac2001725

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  23 in total

1.  Using a nanopore for single molecule detection and single cell transfection.

Authors:  Edward M Nelson; Volker Kurz; Jiwook Shim; Winston Timp; Gregory Timp
Journal:  Analyst       Date:  2012-05-29       Impact factor: 4.616

2.  Direct Sensing and Discrimination among Ubiquitin and Ubiquitin Chains Using Solid-State Nanopores.

Authors:  Iftach Nir; Diana Huttner; Amit Meller
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

3.  High-bandwidth protein analysis using solid-state nanopores.

Authors:  Joseph Larkin; Robert Y Henley; Murugappan Muthukumar; Jacob K Rosenstein; Meni Wanunu
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

4.  Reading the primary structure of a protein with 0.07 nm3 resolution using a subnanometre-diameter pore.

Authors:  Eamonn Kennedy; Zhuxin Dong; Clare Tennant; Gregory Timp
Journal:  Nat Nanotechnol       Date:  2016-07-25       Impact factor: 39.213

5.  Adeno-associated virus characterization for cargo discrimination through nanopore responsiveness.

Authors:  Buddini Iroshika Karawdeniya; Y M Nuwan D Y Bandara; Aminul Islam Khan; Wei Tong Chen; Hoang-Anh Vu; Adnan Morshed; Junghae Suh; Prashanta Dutta; Min Jun Kim
Journal:  Nanoscale       Date:  2020-12-08       Impact factor: 7.790

6.  Multiple consecutive recapture of rigid nanoparticles using a solid-state nanopore sensor.

Authors:  Jung Soo Lee; Bin Peng; Ahmet C Sabuncu; Seungjin Nam; ChiWon Ahn; Moon J Kim; MinJun Kim
Journal:  Electrophoresis       Date:  2017-12-13       Impact factor: 3.535

7.  Nanopore Sensing of Protein Folding.

Authors:  Wei Si; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2017-07-13       Impact factor: 15.881

Review 8.  Conductivity-based detection techniques in nanofluidic devices.

Authors:  Zachary D Harms; Daniel G Haywood; Andrew R Kneller; Stephen C Jacobson
Journal:  Analyst       Date:  2015-05-19       Impact factor: 4.616

9.  Fast translocation of proteins through solid state nanopores.

Authors:  Calin Plesa; Stefan W Kowalczyk; Ruben Zinsmeester; Alexander Y Grosberg; Yitzhak Rabin; Cees Dekker
Journal:  Nano Lett       Date:  2013-01-29       Impact factor: 11.189

Review 10.  Mechanical characterization of vesicles and cells: A review.

Authors:  Adnan Morshed; Buddini Iroshika Karawdeniya; Y M Nuwan D Y Bandara; Min Jun Kim; Prashanta Dutta
Journal:  Electrophoresis       Date:  2020-02-03       Impact factor: 3.535

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