Literature DB >> 21596832

Epigenetic control of gene expression in the lung.

Ivana V Yang1, David A Schwartz.   

Abstract

Epigenetics is traditionally defined as the study of heritable changes in gene expression caused by mechanisms other than changes in the underlying DNA sequence. There are three main classes of epigenetic marks--DNA methylation, modifications of histone tails, and noncoding RNAs--each of which may be influenced by the environment, diet, diseases, and ageing. Importantly, epigenetic marks have been shown to influence immune cell maturation and are associated with the risk of developing various forms of cancer, including lung cancer. Moreover, there is emerging evidence that these epigenetic marks affect gene expression in the lung and are associated with benign lung diseases, such as asthma, chronic obstructive pulmonary disease, and interstitial lung disease. Technological advances have made it feasible to study epigenetic marks in the lung, and it is anticipated that this knowledge will enhance our understanding of the dynamic biology in the lung and lead to the development of novel diagnostic and therapeutic approaches for our patients with lung disease.

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Year:  2011        PMID: 21596832      PMCID: PMC3114059          DOI: 10.1164/rccm.201010-1579PP

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


  77 in total

1.  Demethylation of a specific hypersensitive site in the Th2 locus control region.

Authors:  Sean T Kim; Patrick E Fields; Richard A Flavell
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-12       Impact factor: 11.205

Review 2.  Genome-wide approaches to studying chromatin modifications.

Authors:  Dustin E Schones; Keji Zhao
Journal:  Nat Rev Genet       Date:  2008-03       Impact factor: 53.242

Review 3.  Expression profiling of microRNA using oligo DNA arrays.

Authors:  Chang-Gong Liu; Riccardo Spizzo; George Adrian Calin; Carlo Maria Croce
Journal:  Methods       Date:  2008-01       Impact factor: 3.608

4.  Thy-1 promoter hypermethylation: a novel epigenetic pathogenic mechanism in pulmonary fibrosis.

Authors:  Yan Y Sanders; Annie Pardo; Moisés Selman; Gerard J Nuovo; Trygve O Tollefsbol; Gene P Siegal; James S Hagood
Journal:  Am J Respir Cell Mol Biol       Date:  2008-06-12       Impact factor: 6.914

5.  In utero supplementation with methyl donors enhances allergic airway disease in mice.

Authors:  John W Hollingsworth; Shuichiro Maruoka; Kathy Boon; Stavros Garantziotis; Zhuowei Li; John Tomfohr; Nathaniel Bailey; Erin N Potts; Gregory Whitehead; David M Brass; David A Schwartz
Journal:  J Clin Invest       Date:  2008-10       Impact factor: 14.808

Review 6.  Biological principles of microRNA-mediated regulation: shared themes amid diversity.

Authors:  Alex S Flynt; Eric C Lai
Journal:  Nat Rev Genet       Date:  2008-11       Impact factor: 53.242

7.  Monitoring histone deacetylase inhibition in vivo: noninvasive magnetic resonance spectroscopy method.

Authors:  Madhuri Sankaranarayanapillai; William P Tong; Qing Yuan; James A Bankson; Hagit Dafni; William G Bornmann; Suren Soghomonyan; Ashutosh Pal; Marc S Ramirez; Douglas Webb; Kumaralal Kaluarachchi; Juri G Gelovani; Sabrina M Ronen
Journal:  Mol Imaging       Date:  2008 Mar-Apr       Impact factor: 4.488

8.  Intra-individual change over time in DNA methylation with familial clustering.

Authors:  Hans T Bjornsson; Martin I Sigurdsson; M Daniele Fallin; Rafael A Irizarry; Thor Aspelund; Hengmi Cui; Wenqiang Yu; Michael A Rongione; Tomas J Ekström; Tamara B Harris; Lenore J Launer; Gudny Eiriksdottir; Mark F Leppert; Carmen Sapienza; Vilmundur Gudnason; Andrew P Feinberg
Journal:  JAMA       Date:  2008-06-25       Impact factor: 56.272

9.  DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA.

Authors:  Steen K T Ooi; Chen Qiu; Emily Bernstein; Keqin Li; Da Jia; Zhe Yang; Hediye Erdjument-Bromage; Paul Tempst; Shau-Ping Lin; C David Allis; Xiaodong Cheng; Timothy H Bestor
Journal:  Nature       Date:  2007-08-09       Impact factor: 49.962

10.  Transient cyclical methylation of promoter DNA.

Authors:  Sara Kangaspeska; Brenda Stride; Raphaël Métivier; Maria Polycarpou-Schwarz; David Ibberson; Richard Paul Carmouche; Vladimir Benes; Frank Gannon; George Reid
Journal:  Nature       Date:  2008-03-06       Impact factor: 49.962

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  57 in total

1.  DNA methylation in inflammatory genes among children with obstructive sleep apnea.

Authors:  Jinkwan Kim; Rakesh Bhattacharjee; Abdelnaby Khalyfa; Leila Kheirandish-Gozal; Oscar Sans Capdevila; Yang Wang; David Gozal
Journal:  Am J Respir Crit Care Med       Date:  2011-11-10       Impact factor: 21.405

Review 2.  Epigenetics and the developmental origins of lung disease.

Authors:  Lisa A Joss-Moore; Kurt H Albertine; Robert H Lane
Journal:  Mol Genet Metab       Date:  2011-07-23       Impact factor: 4.797

3.  Cigarette smoking induces small airway epithelial epigenetic changes with corresponding modulation of gene expression.

Authors:  Lauren J Buro-Auriemma; Jacqueline Salit; Neil R Hackett; Matthew S Walters; Yael Strulovici-Barel; Michelle R Staudt; Jennifer Fuller; Mai Mahmoud; Christopher S Stevenson; Holly Hilton; Melisa W Y Ho; Ronald G Crystal
Journal:  Hum Mol Genet       Date:  2013-07-10       Impact factor: 6.150

Review 4.  Epigenetics in lung fibrosis: from pathobiology to treatment perspective.

Authors:  Britney A Helling; Ivana V Yang
Journal:  Curr Opin Pulm Med       Date:  2015-09       Impact factor: 3.155

Review 5.  Epigenomics of idiopathic pulmonary fibrosis.

Authors:  Ivana V Yang
Journal:  Epigenomics       Date:  2012-04       Impact factor: 4.778

Review 6.  Epigenetic contributions to the developmental origins of adult lung disease.

Authors:  Lisa A Joss-Moore; Robert H Lane; Kurt H Albertine
Journal:  Biochem Cell Biol       Date:  2014-10-13       Impact factor: 3.626

Review 7.  Progress in understanding the genetics of bronchopulmonary dysplasia.

Authors:  Gary M Shaw; Hugh M O'Brodovich
Journal:  Semin Perinatol       Date:  2013-04       Impact factor: 3.300

8.  Global DNA methylation and PTEN hypermethylation alterations in lung tissues from human silicosis.

Authors:  Xianan Zhang; Xiaowei Jia; Liangying Mei; Min Zheng; Chen Yu; Meng Ye
Journal:  J Thorac Dis       Date:  2016-08       Impact factor: 2.895

9.  SOX17 methylation inhibits its antagonism of Wnt signaling pathway in lung cancer.

Authors:  Dongtao Yin; Yan Jia; Yuanzi Yu; Malcolm V Brock; James G Herman; Chao Han; Xiaomo Su; Yang Liu; Mingzhou Guo
Journal:  Discov Med       Date:  2012-07       Impact factor: 2.970

Review 10.  Epigenetic mechanisms and models in the origins of asthma.

Authors:  Wilfried Karmaus; Ali H Ziyab; Todd Everson; John W Holloway
Journal:  Curr Opin Allergy Clin Immunol       Date:  2013-02
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