Literature DB >> 2159635

The transposable element Uhu from Hawaiian Drosophila--member of the widely dispersed class of Tc1-like transposons.

L Brezinsky1, G V Wang, T Humphreys, J Hunt.   

Abstract

We report the complete nucleotide sequence of the transposable element Uhu from the vicinity of the alcohol dehydrogenase (Adh) gene of Drosophila heteroneura (an endemic Hawaiian Drosophila). The complete element is about 1650 base-pairs (bp) long, has 46-50 base-pair inverse imperfect repeats at it's ends, and contains a large open reading frame potentially encoding a 192 amino acid protein. We demonstrate that Uhu belongs to a class of transposable elements which includes Tc1 from Caenorhabditis elegans, Barney from Caenorhabditis briggsae, and HB1 from Drosophila melanogaster. All of these elements share significant sequence similarity, are approximately 1600 base pairs long, have short inverse terminal repeats (ITRs), contain open reading frames (ORFs) with significant sequence identity, and appear to insert specifically at TA sequences generating target site duplications.

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Year:  1990        PMID: 2159635      PMCID: PMC330682          DOI: 10.1093/nar/18.8.2053

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Chromosome organization and genic expression.

Authors:  B McCLINTOCK
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1951

3.  Differences between Tc1 elements from the C. elegans strain Bergerac.

Authors:  R H Plasterk
Journal:  Nucleic Acids Res       Date:  1987-12-10       Impact factor: 16.971

4.  Precise and imprecise somatic excision of the transposon Tc1 in the nematode C. elegans.

Authors:  K S Ruan; S W Emmons
Journal:  Nucleic Acids Res       Date:  1987-09-11       Impact factor: 16.971

5.  Transposable element Tc1 of Caenorhabditis elegans recognizes specific target sequences for integration.

Authors:  I Mori; G M Benian; D G Moerman; R H Waterston
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

6.  IS1 insertion generates duplication of a nine base pair sequence at its target site.

Authors:  N D Grindley
Journal:  Cell       Date:  1978-03       Impact factor: 41.582

7.  DNA sequence at the integration sites of the insertion element IS1.

Authors:  M P Calos; L Johnsrud; J H Miller
Journal:  Cell       Date:  1978-03       Impact factor: 41.582

8.  Activation of a transposable element in the germ line but not the soma of Caenorhabditis elegans.

Authors:  J Collins; B Saari; P Anderson
Journal:  Nature       Date:  1987 Aug 20-26       Impact factor: 49.962

9.  Molecular cloning of the muscle gene unc-22 in Caenorhabditis elegans by Tc1 transposon tagging.

Authors:  D G Moerman; G M Benian; R H Waterston
Journal:  Proc Natl Acad Sci U S A       Date:  1986-04       Impact factor: 11.205

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  27 in total

1.  Fot1, a new family of fungal transposable elements.

Authors:  M J Daboussi; T Langin; Y Brygoo
Journal:  Mol Gen Genet       Date:  1992-03

2.  Minos, a new transposable element from Drosophila hydei, is a member of the Tc1-like family of transposons.

Authors:  G Franz; C Savakis
Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

3.  A transposon-related palindromic repetitive sequence from C. elegans.

Authors:  D H Dreyfus; S W Emmons
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

4.  Relationships between transposable elements based upon the integrase-transposase domains: is there a common ancestor?

Authors:  P Capy; R Vitalis; T Langin; D Higuet; C Bazin
Journal:  J Mol Evol       Date:  1996-03       Impact factor: 2.395

5.  restless, an active Ac-like transposon from the fungus Tolypocladium inflatum: structure, expression, and alternative RNA splicing.

Authors:  F Kempken; U Kück
Journal:  Mol Cell Biol       Date:  1996-11       Impact factor: 4.272

6.  The genomes of most animals have multiple members of the Tc1 family of transposable elements.

Authors:  R M Avancini; K K Walden; H M Robertson
Journal:  Genetica       Date:  1996-10       Impact factor: 1.082

7.  Sequences homologous to Tc(s) transposable elements of Caenorhabditis elegans are widely distributed in the phylum nematoda.

Authors:  P Abad; C Quiles; S Tares; C Piotte; P Castagnone-Sereno; M Abadon; A Dalmasso
Journal:  J Mol Evol       Date:  1991-09       Impact factor: 2.395

8.  Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish.

Authors:  A D Radice; B Bugaj; D H Fitch; S W Emmons
Journal:  Mol Gen Genet       Date:  1994-09-28

9.  Intra- and interspecies variation among Bari-1 elements of the melanogaster species group.

Authors:  R Moschetti; C Caggese; P Barsanti; R Caizzi
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

Review 10.  Horizontal transfer of P elements and other short inverted repeat transposons.

Authors:  M G Kidwell
Journal:  Genetica       Date:  1992       Impact factor: 1.082

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