Literature DB >> 21591265

Elevated expression levels of ANXA11, integrins β3 and α3, and TNF-α contribute to a candidate proteomic signature in urine for kidney allograft rejection.

Meera Srivastava1, Ofer Eidelman, Yelizaveta Torosyan, Catherine Jozwik, Roslyn B Mannon, Harvey B Pollard.   

Abstract

PURPOSE: Kidney transplantation is the treatment of choice for end stage renal disease, with long-term allograft loss being the major obstacle, and for which potential treatments are based on a histological diagnosis. The problem is that markers for predicting graft rejection are limited in number, are invasive, and are quite non-specific. We have hypothesized that protein biomarkers might be discovered in the urine of patients when acute or chronic rejection might be occurring. EXPERIMENTAL
DESIGN: We have established a workflow in which initial screening for candidate biomarkers is first performed using urine samples on large-scale antibody microarrays. This approach generated several dozen candidates. The next step is to qualify some of the strongest signals using the high-throughput Reverse Capture Protein Microarray platform.
RESULTS: Four top candidates including ANXA11, Integrin α3, Integrin β3 and TNF-α, initially identified by the antibody microarray platform, were all qualified using Reverse Capture Protein Microarrays. We also used receiver operating condition (ROC) curves to independently quantify the specificity and sensitivity of these four analytes. CONCLUSIONS AND CLINICAL RELEVANCE: The present data suggest that these novel four analytes in the urine, together or independently, may contribute to a robust and quantitative urine proteomic signature for diagnosing acute or chronic rejection of renal allografts.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21591265      PMCID: PMC3444813          DOI: 10.1002/prca.201000109

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  41 in total

1.  Reverse phase protein microarray technology in traumatic brain injury.

Authors:  Andrea B Gyorgy; John Walker; Dan Wingo; Ofer Eidelman; Harvey B Pollard; Andras Molnar; Denes V Agoston
Journal:  J Neurosci Methods       Date:  2010-07-30       Impact factor: 2.390

Review 2.  Urine collection and processing for protein biomarker discovery and quantification.

Authors:  C Eric Thomas; Wade Sexton; Kaaron Benson; Rebecca Sutphen; John Koomen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

3.  Monocyte infiltration and kidney allograft dysfunction during acute rejection.

Authors:  R Girlanda; D E Kleiner; Z Duan; E A S Ford; E C Wright; R B Mannon; A D Kirk
Journal:  Am J Transplant       Date:  2008-03       Impact factor: 8.086

4.  Application of label-free quantitative peptidomics for the identification of urinary biomarkers of kidney chronic allograft dysfunction.

Authors:  Luis F Quintana; Josep M Campistol; Maria P Alcolea; Elisenda Bañon-Maneus; Amandaé Sol-González; Pedro R Cutillas
Journal:  Mol Cell Proteomics       Date:  2009-04-07       Impact factor: 5.911

5.  Genetic predictors of acute renal transplant rejection.

Authors:  Alexander S Goldfarb-Rumyantzev; Natalie Naiman
Journal:  Nephrol Dial Transplant       Date:  2010-01-26       Impact factor: 5.992

Review 6.  The non-invasive biopsy--will urinary proteomics make the renal tissue biopsy redundant?

Authors:  K Bramham; H D Mistry; L Poston; L C Chappell; A J Thompson
Journal:  QJM       Date:  2009-06-24

7.  Differentially expressed RNA from public microarray data identifies serum protein biomarkers for cross-organ transplant rejection and other conditions.

Authors:  Rong Chen; Tara K Sigdel; Li Li; Neeraja Kambham; Joel T Dudley; Szu-Chuan Hsieh; R Bryan Klassen; Amery Chen; Tuyen Caohuu; Alexander A Morgan; Hannah A Valantine; Kiran K Khush; Minnie M Sarwal; Atul J Butte
Journal:  PLoS Comput Biol       Date:  2010-09-23       Impact factor: 4.475

8.  Role of beta3 integrin in acute renal allograft rejection in humans.

Authors:  Arun Chandrakantan; David H McDermott; Huong Thi Bich Tran; Mollie Jurewicz; Lorenzo Gallon; Robert Gaston; Edgar Milford; Reza Abdi
Journal:  Clin J Am Soc Nephrol       Date:  2007-10-10       Impact factor: 8.237

Review 9.  Urine proteomics: the present and future of measuring urinary protein components in disease.

Authors:  Jonathan Barratt; Peter Topham
Journal:  CMAJ       Date:  2007-08-14       Impact factor: 8.262

10.  Annexin 11 is required for midbody formation and completion of the terminal phase of cytokinesis.

Authors:  Alejandra Tomas; Clare Futter; Stephen E Moss
Journal:  J Cell Biol       Date:  2004-06-14       Impact factor: 10.539

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  13 in total

1.  Application of systems biology principles to protein biomarker discovery: urinary exosomal proteome in renal transplantation.

Authors:  Trairak Pisitkun; Maria T Gandolfo; Samarjit Das; Mark A Knepper; Serena M Bagnasco
Journal:  Proteomics Clin Appl       Date:  2012-06       Impact factor: 3.494

2.  CRP and acute renal rejection: a marker to the point.

Authors:  Amin Roshdy; Mohamed M El-Khatib; Mary N Rizk; Amal M El-Shehaby
Journal:  Int Urol Nephrol       Date:  2012-01-03       Impact factor: 2.370

Review 3.  Genomic and proteomic fingerprints of acute rejection in peripheral blood and urine.

Authors:  Song Ong; Roslyn B Mannon
Journal:  Transplant Rev (Orlando)       Date:  2014-12-10       Impact factor: 3.943

4.  Realizing the promise of reverse phase protein arrays for clinical, translational, and basic research: a workshop report: the RPPA (Reverse Phase Protein Array) society.

Authors:  Rehan Akbani; Karl-Friedrich Becker; Neil Carragher; Ted Goldstein; Leanne de Koning; Ulrike Korf; Lance Liotta; Gordon B Mills; Satoshi S Nishizuka; Michael Pawlak; Emanuel F Petricoin; Harvey B Pollard; Bryan Serrels; Jingchun Zhu
Journal:  Mol Cell Proteomics       Date:  2014-04-28       Impact factor: 5.911

Review 5.  Proteomics and metabolomics in renal transplantation-quo vadis?

Authors:  Rahul Bohra; Jacek Klepacki; Jelena Klawitter; Jost Klawitter; Joshua M Thurman; Uwe Christians
Journal:  Transpl Int       Date:  2012-11-21       Impact factor: 3.782

Review 6.  The Use of Genomics and Pathway Analysis in Our Understanding and Prediction of Clinical Renal Transplant Injury.

Authors:  Madhav C Menon; Karen L Keung; Barbara Murphy; Philip J OʼConnell
Journal:  Transplantation       Date:  2016-07       Impact factor: 4.939

7.  miRNA profiling discriminates types of rejection and injury in human renal allografts.

Authors:  Julia Wilflingseder; Heinz Regele; Paul Perco; Alexander Kainz; Afschin Soleiman; Ferdinand Mühlbacher; Bernd Mayer; Rainer Oberbauer
Journal:  Transplantation       Date:  2013-03-27       Impact factor: 4.939

8.  The TARC/sICAM5 Ratio in Patient Plasma is a Candidate Biomarker for Drug Resistant Epilepsy.

Authors:  John R Pollard; Ofer Eidelman; Gregory P Mueller; Clifton L Dalgard; Peter B Crino; Christopher T Anderson; Elizabeth J Brand; Evren Burakgazi; Sai K Ivaturi; Harvey B Pollard
Journal:  Front Neurol       Date:  2013-01-03       Impact factor: 4.003

9.  Role of ELISPOT Assays in Risk Assessment Pre- and Post-Kidney Transplantation.

Authors:  Jennifer R Zitzner; Anat R Tambur
Journal:  Cells       Date:  2012-05-10       Impact factor: 6.600

10.  Reduced PARP1 as a Serum Biomarker for Graft Rejection in Kidney Transplantation.

Authors:  Meera Srivastava; Yelizaveta Torosyan; Ofer Eidelman; Catherine Jozwik; Harvey B Pollard; Rosyln Mannon
Journal:  J Proteomics Bioinform       Date:  2015
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