| Literature DB >> 21589556 |
Mehrdad Pourayoubi1, Poorya Zargaran.
Abstract
The mol-ecule of the title compound, C(28)H(28)N(2)O(6)P(2), is organized around an inversion center located at the centre of the piperazine ring. Both piperazine N atoms are substituted by P(O)(OC(6)H(5))(2) phospho-ester groups. The P atoms display a slightly distorted tetra-hedral environment; the N atoms show some deviation from planarity. The O atoms of the P=O groups are involved in inter-molecular C-H⋯O hydrogen bonds, building R(2) (2)(22) rings, in extended chains parallel to the a axis. C-H⋯π inter-actions involving the phenyl rings further stabilize the packing.Entities:
Year: 2010 PMID: 21589556 PMCID: PMC3011784 DOI: 10.1107/S1600536810047860
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C28H28N2O6P2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2258 reflections |
| θ = 3–29° | |
| µ = 0.22 mm−1 | |
| β = 96.756 (1)° | Plate, colourless |
| 0.55 × 0.40 × 0.20 mm | |
| Bruker APEXII CCD area-detector diffractometer | 3405 independent reflections |
| Radiation source: fine-focus sealed tube | 3071 reflections with |
| graphite | |
| ω scans | θmax = 29.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 14864 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3405 reflections | (Δ/σ)max = 0.002 |
| 172 parameters | Δρmax = 0.51 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.29408 (4) | 0.70141 (3) | 0.584588 (12) | 0.01226 (9) | |
| O1 | 0.08499 (13) | 0.65211 (10) | 0.59873 (4) | 0.01722 (18) | |
| O2 | 0.30060 (14) | 0.86102 (9) | 0.55434 (4) | 0.01595 (17) | |
| O3 | 0.46851 (13) | 0.72855 (9) | 0.63989 (3) | 0.01431 (17) | |
| N1 | 0.40456 (15) | 0.59125 (11) | 0.54033 (4) | 0.01435 (19) | |
| C1 | 0.27230 (18) | 0.49056 (13) | 0.50046 (5) | 0.0154 (2) | |
| H1A | 0.2168 | 0.5452 | 0.4642 | 0.019* | |
| H1B | 0.1490 | 0.4557 | 0.5198 | 0.019* | |
| C2 | 0.59794 (18) | 0.64262 (13) | 0.51554 (5) | 0.0159 (2) | |
| H2A | 0.6852 | 0.7054 | 0.5448 | 0.019* | |
| H2B | 0.5564 | 0.7039 | 0.4800 | 0.019* | |
| C3 | 0.24646 (19) | 0.99346 (12) | 0.58193 (5) | 0.0141 (2) | |
| C4 | 0.03688 (19) | 1.04226 (13) | 0.57405 (5) | 0.0174 (2) | |
| H4A | −0.0717 | 0.9831 | 0.5531 | 0.021* | |
| C5 | −0.0111 (2) | 1.18012 (14) | 0.59758 (6) | 0.0213 (2) | |
| H5A | −0.1538 | 1.2157 | 0.5925 | 0.026* | |
| C6 | 0.1478 (2) | 1.26566 (14) | 0.62831 (6) | 0.0224 (3) | |
| H6A | 0.1142 | 1.3603 | 0.6436 | 0.027* | |
| C7 | 0.3561 (2) | 1.21302 (14) | 0.63680 (6) | 0.0221 (3) | |
| H7A | 0.4642 | 1.2709 | 0.6586 | 0.026* | |
| C8 | 0.40715 (19) | 1.07579 (14) | 0.61346 (5) | 0.0181 (2) | |
| H8A | 0.5494 | 1.0393 | 0.6191 | 0.022* | |
| C9 | 0.51165 (18) | 0.61794 (12) | 0.68335 (5) | 0.0136 (2) | |
| C10 | 0.36396 (19) | 0.58904 (13) | 0.72215 (5) | 0.0160 (2) | |
| H10A | 0.2295 | 0.6380 | 0.7181 | 0.019* | |
| C11 | 0.4174 (2) | 0.48638 (14) | 0.76736 (5) | 0.0190 (2) | |
| H11A | 0.3176 | 0.4638 | 0.7941 | 0.023* | |
| C12 | 0.6154 (2) | 0.41695 (14) | 0.77356 (5) | 0.0203 (2) | |
| H12A | 0.6518 | 0.3486 | 0.8049 | 0.024* | |
| C13 | 0.7607 (2) | 0.44750 (14) | 0.73384 (6) | 0.0204 (2) | |
| H13A | 0.8957 | 0.3993 | 0.7380 | 0.025* | |
| C14 | 0.70950 (18) | 0.54823 (13) | 0.68798 (5) | 0.0168 (2) | |
| H14A | 0.8075 | 0.5688 | 0.6605 | 0.020* |
| P1 | 0.01325 (14) | 0.01125 (14) | 0.01239 (14) | 0.00080 (10) | 0.00199 (10) | −0.00088 (9) |
| O1 | 0.0147 (4) | 0.0193 (4) | 0.0182 (4) | 0.0001 (3) | 0.0038 (3) | −0.0014 (3) |
| O2 | 0.0226 (4) | 0.0125 (4) | 0.0133 (4) | 0.0031 (3) | 0.0041 (3) | −0.0003 (3) |
| O3 | 0.0169 (4) | 0.0121 (4) | 0.0136 (4) | −0.0012 (3) | −0.0001 (3) | 0.0006 (3) |
| N1 | 0.0137 (4) | 0.0127 (4) | 0.0170 (5) | −0.0015 (3) | 0.0031 (3) | −0.0035 (3) |
| C1 | 0.0135 (5) | 0.0158 (5) | 0.0170 (5) | −0.0008 (4) | 0.0017 (4) | −0.0036 (4) |
| C2 | 0.0165 (5) | 0.0133 (5) | 0.0187 (5) | −0.0013 (4) | 0.0054 (4) | −0.0029 (4) |
| C3 | 0.0207 (5) | 0.0103 (5) | 0.0116 (5) | 0.0014 (4) | 0.0039 (4) | 0.0008 (4) |
| C4 | 0.0195 (5) | 0.0157 (5) | 0.0166 (5) | 0.0005 (4) | 0.0005 (4) | 0.0003 (4) |
| C5 | 0.0238 (6) | 0.0170 (6) | 0.0240 (6) | 0.0060 (5) | 0.0065 (5) | 0.0036 (5) |
| C6 | 0.0344 (7) | 0.0118 (5) | 0.0229 (6) | 0.0006 (5) | 0.0112 (5) | −0.0009 (4) |
| C7 | 0.0290 (6) | 0.0170 (6) | 0.0206 (6) | −0.0073 (5) | 0.0049 (5) | −0.0026 (4) |
| C8 | 0.0191 (5) | 0.0177 (6) | 0.0179 (5) | −0.0020 (4) | 0.0033 (4) | 0.0012 (4) |
| C9 | 0.0165 (5) | 0.0107 (5) | 0.0130 (5) | −0.0004 (4) | −0.0004 (4) | −0.0008 (4) |
| C10 | 0.0174 (5) | 0.0157 (5) | 0.0150 (5) | 0.0024 (4) | 0.0027 (4) | −0.0012 (4) |
| C11 | 0.0249 (6) | 0.0178 (5) | 0.0148 (5) | 0.0005 (5) | 0.0045 (4) | 0.0005 (4) |
| C12 | 0.0268 (6) | 0.0166 (6) | 0.0167 (5) | 0.0024 (5) | −0.0011 (5) | 0.0019 (4) |
| C13 | 0.0181 (5) | 0.0180 (6) | 0.0245 (6) | 0.0037 (4) | −0.0006 (5) | −0.0001 (5) |
| C14 | 0.0154 (5) | 0.0157 (5) | 0.0195 (5) | 0.0000 (4) | 0.0021 (4) | −0.0016 (4) |
| P1—O1 | 1.4633 (9) | C5—C6 | 1.3855 (19) |
| P1—O2 | 1.5901 (9) | C5—H5A | 0.9500 |
| P1—O3 | 1.5944 (8) | C6—C7 | 1.3885 (19) |
| P1—N1 | 1.6275 (10) | C6—H6A | 0.9500 |
| O2—C3 | 1.4040 (13) | C7—C8 | 1.3923 (17) |
| O3—C9 | 1.4066 (13) | C7—H7A | 0.9500 |
| N1—C1 | 1.4702 (14) | C8—H8A | 0.9500 |
| N1—C2 | 1.4783 (14) | C9—C10 | 1.3847 (16) |
| C1—C2i | 1.5155 (16) | C9—C14 | 1.3889 (16) |
| C1—H1A | 0.9900 | C10—C11 | 1.3946 (16) |
| C1—H1B | 0.9900 | C10—H10A | 0.9500 |
| C2—C1i | 1.5155 (16) | C11—C12 | 1.3880 (18) |
| C2—H2A | 0.9900 | C11—H11A | 0.9500 |
| C2—H2B | 0.9900 | C12—C13 | 1.3913 (18) |
| C3—C4 | 1.3846 (16) | C12—H12A | 0.9500 |
| C3—C8 | 1.3855 (17) | C13—C14 | 1.3919 (17) |
| C4—C5 | 1.3937 (17) | C13—H13A | 0.9500 |
| C4—H4A | 0.9500 | C14—H14A | 0.9500 |
| O1—P1—O2 | 115.93 (5) | C6—C5—H5A | 119.7 |
| O1—P1—O3 | 115.30 (5) | C4—C5—H5A | 119.7 |
| O2—P1—O3 | 99.04 (4) | C5—C6—C7 | 120.00 (11) |
| O1—P1—N1 | 114.71 (5) | C5—C6—H6A | 120.0 |
| O2—P1—N1 | 103.85 (5) | C7—C6—H6A | 120.0 |
| O3—P1—N1 | 106.20 (5) | C6—C7—C8 | 120.27 (12) |
| C3—O2—P1 | 122.92 (7) | C6—C7—H7A | 119.9 |
| C9—O3—P1 | 120.74 (7) | C8—C7—H7A | 119.9 |
| C1—N1—C2 | 112.78 (9) | C3—C8—C7 | 118.71 (11) |
| C1—N1—P1 | 120.23 (8) | C3—C8—H8A | 120.6 |
| C2—N1—P1 | 118.91 (7) | C7—C8—H8A | 120.6 |
| N1—C1—C2i | 110.39 (9) | C10—C9—C14 | 122.29 (11) |
| N1—C1—H1A | 109.6 | C10—C9—O3 | 119.68 (10) |
| C2i—C1—H1A | 109.6 | C14—C9—O3 | 117.89 (10) |
| N1—C1—H1B | 109.6 | C9—C10—C11 | 118.39 (11) |
| C2i—C1—H1B | 109.6 | C9—C10—H10A | 120.8 |
| H1A—C1—H1B | 108.1 | C11—C10—H10A | 120.8 |
| N1—C2—C1i | 109.99 (9) | C12—C11—C10 | 120.49 (11) |
| N1—C2—H2A | 109.7 | C12—C11—H11A | 119.8 |
| C1i—C2—H2A | 109.7 | C10—C11—H11A | 119.8 |
| N1—C2—H2B | 109.7 | C11—C12—C13 | 119.99 (11) |
| C1i—C2—H2B | 109.7 | C11—C12—H12A | 120.0 |
| H2A—C2—H2B | 108.2 | C13—C12—H12A | 120.0 |
| C4—C3—C8 | 121.97 (11) | C12—C13—C14 | 120.44 (11) |
| C4—C3—O2 | 119.17 (10) | C12—C13—H13A | 119.8 |
| C8—C3—O2 | 118.76 (10) | C14—C13—H13A | 119.8 |
| C3—C4—C5 | 118.47 (11) | C9—C14—C13 | 118.39 (11) |
| C3—C4—H4A | 120.8 | C9—C14—H14A | 120.8 |
| C5—C4—H4A | 120.8 | C13—C14—H14A | 120.8 |
| C6—C5—C4 | 120.55 (12) |
| Cg1 and Cg2 are the centroids of the C3–C8 and C11–C14 rings, respectively. |
| H··· | ||||
| C14—H14A···O1ii | 0.95 | 2.49 | 3.4327 (15) | 172 |
| C11—H11A···Cg1iii | 0.95 | 2.74 | 3.3324 (12) | 121 |
| C7—H7A···Cg2iv | 0.95 | 2.59 | 3.4099 (13) | 145 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the C3–C8 and C11–C14 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| C14—H14 | 0.95 | 2.49 | 3.4327 (15) | 172 |
| C11—H11 | 0.95 | 2.74 | 3.3324 (12) | 121 |
| C7—H7 | 0.95 | 2.59 | 3.4099 (13) | 145 |
Symmetry codes: (i) ; (ii) ; (iii) .