Literature DB >> 21589516

1,3-Dimethyl-5-methyl-sulfonyl-1H-pyrazolo-[4,3-e][1,2,4]triazine.

Mariusz Mojzych1, Zbigniew Karczmarzyk, Waldemar Wysocki.   

Abstract

In the title compound, C(7)H(9)N(5)O(2)S, the pyrazolo-[4,3-e][1,2,4]triazine fused-ring system is essentially planar [maximum deviation = 0.0420 (3) Å]. In the crystal, mol-ecules related by twofold axes are linked into a mol-ecular net via inter-molecular C-H⋯O and C-H⋯N hydrogen bonds. π-π inter-actions are observed between the triazine and pyrazole rings of mol-ecules related by the the twofold axis and inversion symmetry with centroid-centroid distances of 3.778 (3) and 3.416 (3) Å, respectively.

Entities:  

Year:  2010        PMID: 21589516      PMCID: PMC3011395          DOI: 10.1107/S1600536810047264

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to sulfones, see: Ingall (1984 ▶). For our work on the development of convenient synthetic approaches for the construction of biologically active heterocycles, see: Karczmarzyk et al. (2007 ▶). For related structures, see: Hirata et al. (1996 ▶); Rykowski et al. (2000 ▶); Cherng-Chyi et al. (1994 ▶).

Experimental

Crystal data

C7H9N5O2S M = 227.25 Monoclinic, a = 17.901 (1) Å b = 8.1268 (7) Å c = 14.203 (3) Å β = 103.17 (1)° V = 2011.9 (5) Å3 Z = 8 Mo Kα radiation μ = 0.31 mm−1 T = 293 K 0.40 × 0.30 × 0.10 mm

Data collection

Kuma KM-4 four-circle diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.860, T max = 0.980 3688 measured reflections 2948 independent reflections 1085 reflections with I > 2σ(I) R int = 0.064 2 standard reflections every 100 reflections intensity decay: 1.4%

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.227 S = 1.02 2948 reflections 139 parameters H-atom parameters constrained Δρmax = 0.81 e Å−3 Δρmin = −0.72 e Å−3 Data collection: KM4B8 (Gałdecki et al., 1996 ▶); cell refinement: KM4B8; data reduction: DATAPROC (Gałdecki et al., 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810047264/pv2349sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810047264/pv2349Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H9N5O2SF(000) = 944
Mr = 227.25Dx = 1.500 Mg m3
Monoclinic, C2/cMelting point: 444 K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 17.901 (1) ÅCell parameters from 25 reflections
b = 8.1268 (7) Åθ = 4.4–25.2°
c = 14.203 (3) ŵ = 0.31 mm1
β = 103.17 (1)°T = 293 K
V = 2011.9 (5) Å3Prism, colourless
Z = 80.40 × 0.30 × 0.10 mm
Kuma KM-4 four-circle diffractometer1085 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.064
graphiteθmax = 30.1°, θmin = 2.3°
ω–2θ scansh = −25→24
Absorption correction: ψ scan (North et al., 1968)k = −1→11
Tmin = 0.860, Tmax = 0.980l = −1→19
3688 measured reflections2 standard reflections every 100 reflections
2948 independent reflections intensity decay: 1.4%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.227H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
2948 reflections(Δ/σ)max < 0.001
139 parametersΔρmax = 0.81 e Å3
0 restraintsΔρmin = −0.72 e Å3
Experimental. Yield: 95% and m.p. 444 K. 1H NMR (CDCl3) δ: 2.77 (s, 3H), 3.57 (s, 3H), 4.39 (s, 3H); IR (KBr,ν, cm-1): 2920, 1330, 1120; MS (m/z, %): 227 (8) [M+], 199 (32), 120 (21), 95 (51), 79 (94), 67 (28), 52 (100). Analysis calculated for C7H9N5O2S: C 37.00, H 3.99, N 30.82%; found: C 37.01, H 3.85, N 30.76%.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S120.15935 (7)0.15917 (15)0.19815 (10)0.0433 (4)
O130.1310 (2)0.0271 (5)0.1348 (3)0.0748 (13)
O140.1737 (2)0.1313 (5)0.3001 (3)0.0765 (13)
N10.0756 (2)0.6040 (5)0.1881 (3)0.0412 (10)
N20.1192 (2)0.4699 (5)0.2062 (3)0.0373 (9)
N40.02186 (19)0.2860 (5)0.1191 (3)0.0361 (9)
N7−0.0502 (2)0.6833 (5)0.0994 (3)0.0388 (9)
N8−0.1138 (2)0.6061 (5)0.0483 (3)0.0435 (10)
C30.0915 (2)0.3259 (5)0.1696 (3)0.0317 (9)
C5−0.0227 (2)0.4200 (5)0.1003 (3)0.0336 (10)
C60.0051 (2)0.5751 (5)0.1322 (3)0.0332 (10)
C9−0.0993 (2)0.4447 (6)0.0469 (3)0.0377 (11)
C10−0.0494 (3)0.8619 (6)0.1113 (4)0.0586 (15)
H10A−0.07700.89090.15940.088*
H10B−0.07320.91280.05090.088*
H10C0.00270.89950.13150.088*
C11−0.1567 (3)0.3236 (6)−0.0021 (4)0.0567 (14)
H11A−0.20110.3804−0.03810.085*
H11B−0.17120.25390.04530.085*
H11C−0.13500.2579−0.04540.085*
C150.2416 (3)0.2357 (8)0.1689 (5)0.0646 (17)
H15A0.28070.15260.18030.097*
H15B0.25930.33020.20830.097*
H15C0.23030.26690.10200.097*
U11U22U33U12U13U23
S120.0358 (6)0.0407 (7)0.0504 (7)0.0015 (6)0.0035 (5)0.0050 (6)
O130.058 (2)0.044 (2)0.108 (3)0.0052 (19)−0.011 (2)−0.022 (2)
O140.075 (3)0.096 (3)0.057 (2)0.030 (2)0.012 (2)0.036 (2)
N10.0313 (19)0.047 (2)0.042 (2)−0.0005 (18)0.0021 (16)−0.0085 (19)
N20.0316 (18)0.038 (2)0.039 (2)0.0034 (17)0.0013 (15)0.0006 (18)
N40.0315 (18)0.040 (2)0.035 (2)−0.0049 (16)0.0025 (16)0.0024 (17)
N70.0339 (19)0.040 (2)0.040 (2)0.0048 (18)0.0033 (16)−0.0033 (18)
N80.0247 (18)0.063 (3)0.041 (2)0.0028 (18)0.0028 (16)0.000 (2)
C30.0264 (18)0.036 (2)0.031 (2)−0.0035 (19)0.0035 (16)0.001 (2)
C50.0250 (19)0.045 (3)0.030 (2)0.000 (2)0.0058 (16)0.003 (2)
C60.027 (2)0.041 (3)0.030 (2)0.0020 (19)0.0049 (16)−0.006 (2)
C90.025 (2)0.051 (3)0.035 (3)−0.004 (2)0.0017 (18)0.007 (2)
C100.057 (3)0.052 (3)0.061 (4)0.014 (3)0.000 (3)−0.003 (3)
C110.036 (2)0.065 (3)0.062 (3)−0.022 (3)−0.005 (2)0.006 (3)
C150.035 (3)0.073 (4)0.089 (4)0.009 (3)0.020 (3)0.023 (3)
S12—O131.418 (4)C5—C61.393 (6)
S12—O141.430 (4)C5—C91.423 (6)
S12—C151.733 (5)C9—C111.476 (6)
S12—C31.803 (4)C10—H10A0.9600
N1—N21.331 (5)C10—H10B0.9600
N1—C61.350 (5)C10—H10C0.9600
N2—C31.330 (5)C11—H11A0.9600
N4—C31.329 (5)C11—H11B0.9600
N4—C51.340 (5)C11—H11C0.9600
N7—C61.326 (5)C15—H15A0.9600
N7—N81.357 (5)C15—H15B0.9600
N7—C101.461 (6)C15—H15C0.9600
N8—C91.338 (6)
O13—S12—O14118.6 (3)N8—C9—C5107.3 (4)
O13—S12—C15108.7 (3)N8—C9—C11123.0 (4)
O14—S12—C15109.4 (3)C5—C9—C11129.8 (4)
O13—S12—C3107.5 (2)N7—C10—H10A109.5
O14—S12—C3107.6 (2)N7—C10—H10B109.5
C15—S12—C3104.0 (2)H10A—C10—H10B109.5
N2—N1—C6113.5 (4)N7—C10—H10C109.5
N1—N2—C3119.7 (3)H10A—C10—H10C109.5
C3—N4—C5110.6 (4)H10B—C10—H10C109.5
C6—N7—N8110.5 (4)C9—C11—H11A109.5
C6—N7—C10129.1 (4)C9—C11—H11B109.5
N8—N7—C10120.4 (4)H11A—C11—H11B109.5
C9—N8—N7108.6 (3)C9—C11—H11C109.5
N4—C3—N2130.3 (4)H11A—C11—H11C109.5
N4—C3—S12116.0 (3)H11B—C11—H11C109.5
N2—C3—S12113.6 (3)S12—C15—H15A109.5
N4—C5—C6121.3 (4)S12—C15—H15B109.5
N4—C5—C9132.7 (4)H15A—C15—H15B109.5
C6—C5—C9106.0 (4)S12—C15—H15C109.5
N7—C6—N1127.9 (4)H15A—C15—H15C109.5
N7—C6—C5107.7 (4)H15B—C15—H15C109.5
N1—C6—C5124.4 (4)
C6—N1—N2—C30.2 (6)C10—N7—C6—N12.4 (8)
C6—N7—N8—C9−0.8 (5)N8—N7—C6—C51.0 (5)
C10—N7—N8—C9179.0 (4)C10—N7—C6—C5−178.8 (5)
C5—N4—C3—N24.2 (6)N2—N1—C6—N7−177.7 (4)
C5—N4—C3—S12−178.4 (3)N2—N1—C6—C53.7 (6)
N1—N2—C3—N4−4.5 (7)N4—C5—C6—N7177.2 (4)
N1—N2—C3—S12178.1 (3)C9—C5—C6—N7−0.8 (5)
O13—S12—C3—N417.9 (4)N4—C5—C6—N1−3.9 (7)
O14—S12—C3—N4−110.9 (4)C9—C5—C6—N1178.1 (4)
C15—S12—C3—N4133.0 (4)N7—N8—C9—C50.2 (5)
O13—S12—C3—N2−164.3 (3)N7—N8—C9—C11179.5 (4)
O14—S12—C3—N266.9 (4)N4—C5—C9—N8−177.3 (4)
C15—S12—C3—N2−49.2 (4)C6—C5—C9—N80.3 (5)
C3—N4—C5—C60.0 (6)N4—C5—C9—C113.5 (8)
C3—N4—C5—C9177.3 (4)C6—C5—C9—C11−178.9 (5)
N8—N7—C6—N1−177.9 (4)
D—H···AD—HH···AD···AD—H···A
C10—H10C···O13i0.962.513.442 (7)163
C11—H11B···O14ii0.962.423.341 (7)161
C15—H15A···N2iii0.962.593.466 (7)152
Cg(pyrazole)—···.Cg(triazine)ii..3.778 (3).
Cg(pyrazole)—···.Cg(triazine)iv..3.416 (3).
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10C⋯O13i0.962.513.442 (7)163
C11—H11B⋯O14ii0.962.423.341 (7)161
C15—H15A⋯N2iii0.962.593.466 (7)152

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  Synthesis, Structural Characterization, and Biological Activity of New Pyrazolo[4,3-e][1,2,4]triazine Acyclonucleosides.

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