| Literature DB >> 21589510 |
Hoong-Kun Fun, Chin Sing Yeap, J Gowda, A M A Khader, Balakrishna Kalluraya.
Abstract
In the title compound, C(10)H(10)ClN(5), the tetra-zole ring and the phenyl ring make a dihedral angle of 7.7 (2)°. The hexa-hydro-pyrimidine ring adopts a screw-boat conformation. In the crystal, inter-molecular bifurcated N-H⋯(N,N) hydrogen bonds link the mol-ecules into [001] chains.Entities:
Year: 2010 PMID: 21589510 PMCID: PMC3011717 DOI: 10.1107/S160053681004688X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H10ClN5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1888 reflections |
| θ = 3.0–29.9° | |
| µ = 0.34 mm−1 | |
| β = 130.823 (11)° | Plate, colourless |
| 0.16 × 0.11 × 0.05 mm | |
| Bruker APEXII DUO CCD diffractometer | 2412 independent reflections |
| Radiation source: fine-focus sealed tube | 1777 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 9660 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2412 reflections | (Δ/σ)max < 0.001 |
| 151 parameters | Δρmax = 0.61 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.68351 (15) | 0.62515 (4) | 0.46138 (11) | 0.0285 (2) | |
| N1 | 0.0252 (5) | 0.85800 (13) | −0.2050 (3) | 0.0225 (6) | |
| N2 | 0.0079 (5) | 0.92121 (14) | −0.2261 (3) | 0.0276 (6) | |
| N3 | 0.1672 (5) | 0.94937 (13) | −0.0661 (3) | 0.0248 (6) | |
| N4 | 0.2938 (4) | 0.90385 (12) | 0.0634 (3) | 0.0192 (5) | |
| N5 | 0.6368 (5) | 0.85848 (12) | 0.3484 (3) | 0.0210 (6) | |
| C1 | 0.2056 (5) | 0.84885 (14) | −0.0218 (4) | 0.0190 (6) | |
| C2 | 0.3106 (5) | 0.79248 (14) | 0.0880 (4) | 0.0185 (6) | |
| C3 | 0.2129 (6) | 0.73316 (15) | 0.0145 (4) | 0.0216 (7) | |
| H3A | 0.0704 | 0.7285 | −0.1122 | 0.026* | |
| C4 | 0.3259 (6) | 0.68153 (15) | 0.1280 (4) | 0.0234 (7) | |
| H4A | 0.2613 | 0.6420 | 0.0797 | 0.028* | |
| C5 | 0.5397 (6) | 0.69013 (15) | 0.3174 (4) | 0.0213 (6) | |
| C6 | 0.6402 (6) | 0.74777 (15) | 0.3947 (4) | 0.0209 (6) | |
| H6A | 0.7816 | 0.7518 | 0.5218 | 0.025* | |
| C7 | 0.5276 (5) | 0.80012 (14) | 0.2800 (4) | 0.0176 (6) | |
| C8 | 0.4845 (5) | 0.91539 (14) | 0.2689 (4) | 0.0189 (6) | |
| C9 | 0.6573 (6) | 0.96910 (15) | 0.3100 (4) | 0.0271 (7) | |
| H9A | 0.7358 | 0.9608 | 0.2569 | 0.041* | |
| H9B | 0.7896 | 0.9742 | 0.4431 | 0.041* | |
| H9C | 0.5561 | 1.0064 | 0.2561 | 0.041* | |
| C10 | 0.3352 (6) | 0.92761 (16) | 0.3348 (4) | 0.0254 (7) | |
| H10A | 0.2294 | 0.8923 | 0.3065 | 0.038* | |
| H10B | 0.2275 | 0.9635 | 0.2718 | 0.038* | |
| H10C | 0.4549 | 0.9347 | 0.4675 | 0.038* | |
| H1N5 | 0.751 (8) | 0.8595 (18) | 0.467 (6) | 0.039 (11)* |
| Cl1 | 0.0280 (4) | 0.0248 (4) | 0.0334 (4) | 0.0052 (3) | 0.0204 (3) | 0.0085 (4) |
| N1 | 0.0187 (12) | 0.0307 (16) | 0.0131 (12) | 0.0000 (10) | 0.0082 (10) | 0.0003 (11) |
| N2 | 0.0240 (13) | 0.0355 (17) | 0.0148 (12) | 0.0021 (12) | 0.0089 (11) | 0.0035 (12) |
| N3 | 0.0251 (13) | 0.0289 (15) | 0.0147 (12) | 0.0052 (11) | 0.0106 (11) | 0.0061 (11) |
| N4 | 0.0191 (12) | 0.0225 (14) | 0.0107 (11) | 0.0023 (10) | 0.0074 (10) | 0.0021 (10) |
| N5 | 0.0173 (12) | 0.0213 (14) | 0.0104 (12) | −0.0010 (10) | 0.0029 (10) | −0.0017 (10) |
| C1 | 0.0154 (13) | 0.0267 (16) | 0.0135 (13) | −0.0013 (12) | 0.0088 (11) | −0.0040 (12) |
| C2 | 0.0167 (13) | 0.0237 (17) | 0.0151 (13) | 0.0009 (12) | 0.0104 (11) | −0.0009 (12) |
| C3 | 0.0182 (14) | 0.0282 (18) | 0.0166 (14) | −0.0047 (12) | 0.0105 (12) | −0.0053 (13) |
| C4 | 0.0237 (15) | 0.0227 (17) | 0.0253 (16) | −0.0048 (13) | 0.0166 (13) | −0.0063 (13) |
| C5 | 0.0214 (14) | 0.0236 (17) | 0.0257 (15) | 0.0044 (12) | 0.0184 (13) | 0.0044 (13) |
| C6 | 0.0178 (14) | 0.0259 (17) | 0.0165 (14) | 0.0015 (12) | 0.0101 (12) | 0.0001 (12) |
| C7 | 0.0162 (13) | 0.0204 (16) | 0.0171 (13) | −0.0006 (11) | 0.0113 (11) | −0.0016 (12) |
| C8 | 0.0174 (13) | 0.0207 (16) | 0.0135 (13) | −0.0005 (12) | 0.0079 (11) | 0.0006 (12) |
| C9 | 0.0288 (16) | 0.0279 (18) | 0.0178 (14) | −0.0080 (14) | 0.0122 (13) | −0.0009 (13) |
| C10 | 0.0240 (15) | 0.0300 (19) | 0.0195 (15) | 0.0002 (13) | 0.0130 (13) | −0.0006 (13) |
| Cl1—C5 | 1.739 (3) | C3—H3A | 0.9300 |
| N1—C1 | 1.326 (4) | C4—C5 | 1.396 (4) |
| N1—N2 | 1.369 (4) | C4—H4A | 0.9300 |
| N2—N3 | 1.297 (4) | C5—C6 | 1.374 (4) |
| N3—N4 | 1.349 (3) | C6—C7 | 1.394 (4) |
| N4—C1 | 1.334 (4) | C6—H6A | 0.9300 |
| N4—C8 | 1.489 (3) | C8—C9 | 1.511 (4) |
| N5—C7 | 1.386 (4) | C8—C10 | 1.525 (4) |
| N5—C8 | 1.458 (4) | C9—H9A | 0.9600 |
| N5—H1N5 | 0.85 (4) | C9—H9B | 0.9600 |
| C1—C2 | 1.445 (4) | C9—H9C | 0.9600 |
| C2—C3 | 1.397 (4) | C10—H10A | 0.9600 |
| C2—C7 | 1.413 (4) | C10—H10B | 0.9600 |
| C3—C4 | 1.378 (4) | C10—H10C | 0.9600 |
| C1—N1—N2 | 104.8 (2) | C5—C6—C7 | 119.2 (3) |
| N3—N2—N1 | 111.6 (2) | C5—C6—H6A | 120.4 |
| N2—N3—N4 | 105.5 (3) | C7—C6—H6A | 120.4 |
| C1—N4—N3 | 109.3 (2) | N5—C7—C6 | 121.0 (3) |
| C1—N4—C8 | 126.8 (2) | N5—C7—C2 | 119.8 (3) |
| N3—N4—C8 | 123.7 (2) | C6—C7—C2 | 119.0 (3) |
| C7—N5—C8 | 122.4 (2) | N5—C8—N4 | 104.6 (2) |
| C7—N5—H1N5 | 113 (3) | N5—C8—C9 | 109.6 (2) |
| C8—N5—H1N5 | 113 (3) | N4—C8—C9 | 109.5 (2) |
| N1—C1—N4 | 108.8 (3) | N5—C8—C10 | 112.2 (2) |
| N1—C1—C2 | 131.4 (3) | N4—C8—C10 | 108.1 (2) |
| N4—C1—C2 | 119.8 (2) | C9—C8—C10 | 112.4 (3) |
| C3—C2—C7 | 120.2 (3) | C8—C9—H9A | 109.5 |
| C3—C2—C1 | 124.0 (3) | C8—C9—H9B | 109.5 |
| C7—C2—C1 | 115.7 (3) | H9A—C9—H9B | 109.5 |
| C4—C3—C2 | 120.6 (3) | C8—C9—H9C | 109.5 |
| C4—C3—H3A | 119.7 | H9A—C9—H9C | 109.5 |
| C2—C3—H3A | 119.7 | H9B—C9—H9C | 109.5 |
| C3—C4—C5 | 118.3 (3) | C8—C10—H10A | 109.5 |
| C3—C4—H4A | 120.9 | C8—C10—H10B | 109.5 |
| C5—C4—H4A | 120.9 | H10A—C10—H10B | 109.5 |
| C6—C5—C4 | 122.7 (3) | C8—C10—H10C | 109.5 |
| C6—C5—Cl1 | 118.8 (2) | H10A—C10—H10C | 109.5 |
| C4—C5—Cl1 | 118.5 (2) | H10B—C10—H10C | 109.5 |
| C1—N1—N2—N3 | −0.1 (3) | C4—C5—C6—C7 | −0.8 (4) |
| N1—N2—N3—N4 | 0.4 (3) | Cl1—C5—C6—C7 | 179.5 (2) |
| N2—N3—N4—C1 | −0.7 (3) | C8—N5—C7—C6 | −153.7 (3) |
| N2—N3—N4—C8 | −175.8 (2) | C8—N5—C7—C2 | 31.3 (4) |
| N2—N1—C1—N4 | −0.3 (3) | C5—C6—C7—N5 | −174.1 (3) |
| N2—N1—C1—C2 | 179.9 (3) | C5—C6—C7—C2 | 1.0 (4) |
| N3—N4—C1—N1 | 0.6 (3) | C3—C2—C7—N5 | 174.4 (3) |
| C8—N4—C1—N1 | 175.6 (2) | C1—C2—C7—N5 | −4.6 (4) |
| N3—N4—C1—C2 | −179.6 (2) | C3—C2—C7—C6 | −0.7 (4) |
| C8—N4—C1—C2 | −4.6 (4) | C1—C2—C7—C6 | −179.7 (2) |
| N1—C1—C2—C3 | −7.2 (5) | C7—N5—C8—N4 | −38.5 (3) |
| N4—C1—C2—C3 | 173.0 (3) | C7—N5—C8—C9 | −155.9 (3) |
| N1—C1—C2—C7 | 171.7 (3) | C7—N5—C8—C10 | 78.4 (3) |
| N4—C1—C2—C7 | −8.0 (4) | C1—N4—C8—N5 | 25.7 (4) |
| C7—C2—C3—C4 | 0.2 (4) | N3—N4—C8—N5 | −159.9 (2) |
| C1—C2—C3—C4 | 179.2 (3) | C1—N4—C8—C9 | 143.2 (3) |
| C2—C3—C4—C5 | −0.1 (4) | N3—N4—C8—C9 | −42.5 (4) |
| C3—C4—C5—C6 | 0.4 (4) | C1—N4—C8—C10 | −94.0 (3) |
| C3—C4—C5—Cl1 | −179.9 (2) | N3—N4—C8—C10 | 80.3 (3) |
| H··· | ||||
| N5—H1N5···N1i | 0.85 (4) | 2.35 (4) | 3.190 (3) | 173 (6) |
| N5—H1N5···N2i | 0.85 (4) | 2.57 (4) | 3.326 (3) | 150 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H1 | 0.85 (4) | 2.35 (4) | 3.190 (3) | 173 (6) |
| N5—H1 | 0.85 (4) | 2.57 (4) | 3.326 (3) | 150 (4) |
Symmetry code: (i) .