| Literature DB >> 21589495 |
Huai-Gang Su1, Liang-Zhong Xu.
Abstract
In the title compound, C(13)H(18)ClN(5)O(2), the 1,3,5-triazinane ring exhibits an envelope conformation with an E form. The chloro-phenyl ring and the nitro group are each twisted with respect to the mean plane of the triazinane ring, making dihedral angles of 67.30 (9) and 83.54 (8)°, respectively. In the crystal, weak inter-molecular C-H⋯O hydrogen bonds build up a corrugated layer parallel to the (101) plane.Entities:
Year: 2010 PMID: 21589495 PMCID: PMC3011515 DOI: 10.1107/S1600536810046246
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H18ClN5O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3278 reflections |
| θ = 1.4–27.9° | |
| µ = 0.27 mm−1 | |
| β = 108.75 (3)° | Needle, colourless |
| 0.20 × 0.16 × 0.12 mm | |
| Rigaku Saturn CCD area-detector diffractometer | 2585 independent reflections |
| Radiation source: rotating anode | 2303 reflections with |
| confocal | |
| Detector resolution: 7.31 pixels mm-1 | θmax = 25.0°, θmin = 1.4° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 9753 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2585 reflections | (Δ/σ)max < 0.001 |
| 193 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.51 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.37472 (9) | 0.56523 (2) | 0.15716 (10) | 0.0546 (2) | |
| O1 | −0.25418 (19) | 0.29503 (4) | 0.41241 (18) | 0.0236 (3) | |
| O2 | −0.48276 (18) | 0.33395 (5) | 0.47562 (18) | 0.0254 (3) | |
| N1 | −0.0516 (2) | 0.36893 (5) | 0.2166 (2) | 0.0173 (3) | |
| N2 | −0.2858 (2) | 0.32380 (5) | 0.0044 (2) | 0.0175 (3) | |
| N3 | 0.0492 (2) | 0.31375 (5) | 0.0208 (2) | 0.0181 (3) | |
| N4 | −0.3580 (2) | 0.36095 (5) | 0.2595 (2) | 0.0197 (3) | |
| N5 | −0.3641 (2) | 0.32910 (5) | 0.3838 (2) | 0.0181 (3) | |
| C1 | 0.3035 (3) | 0.44147 (6) | 0.3422 (3) | 0.0261 (4) | |
| H1 | 0.3813 | 0.4153 | 0.3853 | 0.031* | |
| C2 | 0.3844 (3) | 0.47936 (7) | 0.2862 (3) | 0.0321 (5) | |
| H2 | 0.5159 | 0.4789 | 0.2876 | 0.038* | |
| C3 | 0.2725 (3) | 0.51775 (7) | 0.2283 (3) | 0.0323 (5) | |
| C4 | 0.0823 (3) | 0.51896 (7) | 0.2250 (3) | 0.0326 (5) | |
| H4 | 0.0071 | 0.5457 | 0.1871 | 0.039* | |
| C5 | 0.0016 (3) | 0.48064 (6) | 0.2776 (3) | 0.0265 (4) | |
| H5 | −0.1307 | 0.4813 | 0.2736 | 0.032* | |
| C6 | 0.1093 (3) | 0.44127 (6) | 0.3362 (3) | 0.0206 (4) | |
| C7 | 0.0118 (3) | 0.39993 (6) | 0.3875 (3) | 0.0200 (4) | |
| H7 | −0.1081 | 0.4105 | 0.4143 | 0.024* | |
| C8 | 0.1367 (3) | 0.37472 (6) | 0.5690 (3) | 0.0231 (4) | |
| H8A | 0.2520 | 0.3622 | 0.5446 | 0.035* | |
| H8B | 0.0605 | 0.3501 | 0.5991 | 0.035* | |
| H8C | 0.1776 | 0.3957 | 0.6797 | 0.035* | |
| C9 | −0.2273 (2) | 0.34984 (5) | 0.1609 (2) | 0.0166 (4) | |
| C10 | −0.1503 (3) | 0.31248 (6) | −0.1043 (3) | 0.0199 (4) | |
| H10A | −0.1808 | 0.2819 | −0.1616 | 0.024* | |
| H10B | −0.1683 | 0.3343 | −0.2127 | 0.024* | |
| C11 | 0.0888 (3) | 0.35748 (6) | 0.1119 (3) | 0.0184 (4) | |
| H11A | 0.0810 | 0.3807 | 0.0110 | 0.022* | |
| H11B | 0.2229 | 0.3578 | 0.2056 | 0.022* | |
| C12 | 0.0994 (3) | 0.27654 (6) | 0.1633 (3) | 0.0231 (4) | |
| H12A | 0.0757 | 0.2475 | 0.0940 | 0.035* | |
| H12B | 0.0188 | 0.2785 | 0.2489 | 0.035* | |
| H12C | 0.2373 | 0.2787 | 0.2420 | 0.035* | |
| C13 | −0.4771 (3) | 0.30192 (6) | −0.0593 (3) | 0.0226 (4) | |
| H13A | −0.5701 | 0.3204 | −0.0193 | 0.034* | |
| H13B | −0.4672 | 0.2719 | 0.0007 | 0.034* | |
| H13C | −0.5222 | 0.2988 | −0.2018 | 0.034* |
| Cl1 | 0.0535 (4) | 0.0359 (3) | 0.0547 (4) | −0.0206 (3) | −0.0102 (3) | 0.0202 (3) |
| O1 | 0.0254 (7) | 0.0221 (7) | 0.0255 (7) | 0.0071 (5) | 0.0111 (6) | 0.0057 (5) |
| O2 | 0.0188 (7) | 0.0410 (8) | 0.0203 (7) | 0.0038 (6) | 0.0120 (5) | 0.0028 (6) |
| N1 | 0.0174 (8) | 0.0186 (7) | 0.0171 (7) | 0.0002 (6) | 0.0071 (6) | −0.0011 (6) |
| N2 | 0.0142 (7) | 0.0210 (8) | 0.0176 (7) | 0.0000 (6) | 0.0057 (6) | 0.0004 (6) |
| N3 | 0.0165 (8) | 0.0198 (8) | 0.0185 (7) | −0.0008 (6) | 0.0062 (6) | −0.0019 (6) |
| N4 | 0.0190 (8) | 0.0220 (8) | 0.0207 (8) | 0.0039 (6) | 0.0100 (6) | 0.0035 (6) |
| N5 | 0.0151 (7) | 0.0233 (8) | 0.0155 (7) | 0.0002 (6) | 0.0045 (6) | −0.0007 (6) |
| C1 | 0.0241 (10) | 0.0198 (9) | 0.0300 (10) | −0.0014 (7) | 0.0026 (8) | 0.0005 (8) |
| C2 | 0.0260 (11) | 0.0310 (11) | 0.0346 (11) | −0.0077 (8) | 0.0033 (9) | 0.0021 (9) |
| C3 | 0.0390 (12) | 0.0229 (10) | 0.0254 (10) | −0.0100 (9) | −0.0032 (9) | 0.0030 (8) |
| C4 | 0.0439 (13) | 0.0204 (10) | 0.0262 (11) | 0.0063 (9) | 0.0012 (9) | 0.0000 (8) |
| C5 | 0.0286 (10) | 0.0269 (10) | 0.0223 (10) | 0.0049 (8) | 0.0059 (8) | −0.0039 (8) |
| C6 | 0.0249 (10) | 0.0188 (9) | 0.0164 (9) | −0.0012 (7) | 0.0044 (7) | −0.0038 (7) |
| C7 | 0.0206 (9) | 0.0214 (9) | 0.0184 (9) | 0.0015 (7) | 0.0067 (7) | −0.0046 (7) |
| C8 | 0.0247 (10) | 0.0262 (10) | 0.0189 (9) | −0.0005 (8) | 0.0075 (8) | −0.0005 (7) |
| C9 | 0.0175 (9) | 0.0155 (8) | 0.0165 (8) | 0.0039 (7) | 0.0052 (7) | 0.0038 (7) |
| C10 | 0.0196 (9) | 0.0253 (10) | 0.0159 (8) | −0.0008 (7) | 0.0073 (7) | −0.0021 (7) |
| C11 | 0.0175 (9) | 0.0204 (9) | 0.0195 (9) | −0.0012 (7) | 0.0088 (7) | −0.0010 (7) |
| C12 | 0.0223 (10) | 0.0215 (9) | 0.0250 (10) | 0.0027 (7) | 0.0070 (8) | 0.0004 (7) |
| C13 | 0.0146 (9) | 0.0290 (10) | 0.0232 (9) | −0.0024 (7) | 0.0045 (7) | −0.0022 (8) |
| Cl1—C3 | 1.740 (2) | C4—C5 | 1.383 (3) |
| O1—N5 | 1.2595 (19) | C4—H4 | 0.9500 |
| O2—N5 | 1.2522 (19) | C5—C6 | 1.390 (3) |
| N1—C9 | 1.332 (2) | C5—H5 | 0.9500 |
| N1—C7 | 1.488 (2) | C6—C7 | 1.516 (3) |
| N1—C11 | 1.490 (2) | C7—C8 | 1.527 (3) |
| N2—C9 | 1.321 (2) | C7—H7 | 1.0000 |
| N2—C13 | 1.464 (2) | C8—H8A | 0.9800 |
| N2—C10 | 1.480 (2) | C8—H8B | 0.9800 |
| N3—C11 | 1.437 (2) | C8—H8C | 0.9800 |
| N3—C10 | 1.439 (2) | C10—H10A | 0.9900 |
| N3—C12 | 1.471 (2) | C10—H10B | 0.9900 |
| N4—N5 | 1.312 (2) | C11—H11A | 0.9900 |
| N4—C9 | 1.395 (2) | C11—H11B | 0.9900 |
| C1—C2 | 1.384 (3) | C12—H12A | 0.9800 |
| C1—C6 | 1.394 (3) | C12—H12B | 0.9800 |
| C1—H1 | 0.9500 | C12—H12C | 0.9800 |
| C2—C3 | 1.379 (3) | C13—H13A | 0.9800 |
| C2—H2 | 0.9500 | C13—H13B | 0.9800 |
| C3—C4 | 1.372 (3) | C13—H13C | 0.9800 |
| C9—N1—C7 | 121.49 (14) | C6—C7—H7 | 107.3 |
| C9—N1—C11 | 119.58 (14) | C8—C7—H7 | 107.3 |
| C7—N1—C11 | 118.87 (13) | C7—C8—H8A | 109.5 |
| C9—N2—C13 | 122.48 (15) | C7—C8—H8B | 109.5 |
| C9—N2—C10 | 120.15 (14) | H8A—C8—H8B | 109.5 |
| C13—N2—C10 | 117.16 (14) | C7—C8—H8C | 109.5 |
| C11—N3—C10 | 108.91 (14) | H8A—C8—H8C | 109.5 |
| C11—N3—C12 | 112.59 (14) | H8B—C8—H8C | 109.5 |
| C10—N3—C12 | 113.18 (14) | N2—C9—N1 | 121.19 (15) |
| N5—N4—C9 | 111.03 (14) | N2—C9—N4 | 119.45 (15) |
| O2—N5—O1 | 120.71 (14) | N1—C9—N4 | 119.10 (15) |
| O2—N5—N4 | 117.46 (14) | N3—C10—N2 | 111.35 (14) |
| O1—N5—N4 | 121.83 (14) | N3—C10—H10A | 109.4 |
| C2—C1—C6 | 120.84 (18) | N2—C10—H10A | 109.4 |
| C2—C1—H1 | 119.6 | N3—C10—H10B | 109.4 |
| C6—C1—H1 | 119.6 | N2—C10—H10B | 109.4 |
| C3—C2—C1 | 119.5 (2) | H10A—C10—H10B | 108.0 |
| C3—C2—H2 | 120.3 | N3—C11—N1 | 111.63 (14) |
| C1—C2—H2 | 120.3 | N3—C11—H11A | 109.3 |
| C4—C3—C2 | 121.07 (19) | N1—C11—H11A | 109.3 |
| C4—C3—Cl1 | 119.65 (16) | N3—C11—H11B | 109.3 |
| C2—C3—Cl1 | 119.28 (18) | N1—C11—H11B | 109.3 |
| C3—C4—C5 | 119.04 (18) | H11A—C11—H11B | 108.0 |
| C3—C4—H4 | 120.5 | N3—C12—H12A | 109.5 |
| C5—C4—H4 | 120.5 | N3—C12—H12B | 109.5 |
| C4—C5—C6 | 121.61 (19) | H12A—C12—H12B | 109.5 |
| C4—C5—H5 | 119.2 | N3—C12—H12C | 109.5 |
| C6—C5—H5 | 119.2 | H12A—C12—H12C | 109.5 |
| C5—C6—C1 | 117.94 (17) | H12B—C12—H12C | 109.5 |
| C5—C6—C7 | 119.32 (17) | N2—C13—H13A | 109.5 |
| C1—C6—C7 | 122.73 (16) | N2—C13—H13B | 109.5 |
| N1—C7—C6 | 109.73 (14) | H13A—C13—H13B | 109.5 |
| N1—C7—C8 | 110.65 (14) | N2—C13—H13C | 109.5 |
| C6—C7—C8 | 114.18 (15) | H13A—C13—H13C | 109.5 |
| N1—C7—H7 | 107.3 | H13B—C13—H13C | 109.5 |
| H··· | ||||
| C8—H8A···O2i | 0.98 | 2.29 | 3.273 (2) | 178 |
| C10—H10A···O1ii | 0.99 | 2.43 | 3.278 (2) | 143 |
| C11—H11B···O2i | 0.99 | 2.49 | 3.434 (3) | 160 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8 | 0.98 | 2.29 | 3.273 (2) | 178 |
| C10—H10 | 0.99 | 2.43 | 3.278 (2) | 143 |
| C11—H11 | 0.99 | 2.49 | 3.434 (3) | 160 |
Symmetry codes: (i) ; (ii) .