Literature DB >> 21589495

(E)-1-[1-(4-Chloro-phen-yl)eth-yl]-3,5-dimethyl-N-nitro-1,3,5-triazinan-2-imine.

Huai-Gang Su1, Liang-Zhong Xu.   

Abstract

In the title compound, C(13)H(18)ClN(5)O(2), the 1,3,5-triazinane ring exhibits an envelope conformation with an E form. The chloro-phenyl ring and the nitro group are each twisted with respect to the mean plane of the triazinane ring, making dihedral angles of 67.30 (9) and 83.54 (8)°, respectively. In the crystal, weak inter-molecular C-H⋯O hydrogen bonds build up a corrugated layer parallel to the (101) plane.

Entities:  

Year:  2010        PMID: 21589495      PMCID: PMC3011515          DOI: 10.1107/S1600536810046246

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound was synthesized as a new compound with better insecticidal activity. For similar compounds with insecticidal properties, see: Koln et al. (2002 ▶). For related structures, see: Zhao et al. (2008 ▶); Hu et al. (2008 ▶); Xu et al. (2010 ▶) For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C13H18ClN5O2 M = 311.77 Monoclinic, a = 7.2483 (14) Å b = 29.568 (6) Å c = 7.2306 (14) Å β = 108.75 (3)° V = 1467.4 (5) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 113 K 0.20 × 0.16 × 0.12 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.947, T max = 0.968 9753 measured reflections 2585 independent reflections 2303 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.104 S = 1.08 2585 reflections 193 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.51 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶) and ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810046246/dn2619sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810046246/dn2619Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H18ClN5O2F(000) = 656
Mr = 311.77Dx = 1.411 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3278 reflections
a = 7.2483 (14) Åθ = 1.4–27.9°
b = 29.568 (6) ŵ = 0.27 mm1
c = 7.2306 (14) ÅT = 113 K
β = 108.75 (3)°Needle, colourless
V = 1467.4 (5) Å30.20 × 0.16 × 0.12 mm
Z = 4
Rigaku Saturn CCD area-detector diffractometer2585 independent reflections
Radiation source: rotating anode2303 reflections with I > 2σ(I)
confocalRint = 0.039
Detector resolution: 7.31 pixels mm-1θmax = 25.0°, θmin = 1.4°
ω and φ scansh = −8→8
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −35→34
Tmin = 0.947, Tmax = 0.968l = −8→8
9753 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0488P)2 + 0.7943P] where P = (Fo2 + 2Fc2)/3
2585 reflections(Δ/σ)max < 0.001
193 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.37472 (9)0.56523 (2)0.15716 (10)0.0546 (2)
O1−0.25418 (19)0.29503 (4)0.41241 (18)0.0236 (3)
O2−0.48276 (18)0.33395 (5)0.47562 (18)0.0254 (3)
N1−0.0516 (2)0.36893 (5)0.2166 (2)0.0173 (3)
N2−0.2858 (2)0.32380 (5)0.0044 (2)0.0175 (3)
N30.0492 (2)0.31375 (5)0.0208 (2)0.0181 (3)
N4−0.3580 (2)0.36095 (5)0.2595 (2)0.0197 (3)
N5−0.3641 (2)0.32910 (5)0.3838 (2)0.0181 (3)
C10.3035 (3)0.44147 (6)0.3422 (3)0.0261 (4)
H10.38130.41530.38530.031*
C20.3844 (3)0.47936 (7)0.2862 (3)0.0321 (5)
H20.51590.47890.28760.038*
C30.2725 (3)0.51775 (7)0.2283 (3)0.0323 (5)
C40.0823 (3)0.51896 (7)0.2250 (3)0.0326 (5)
H40.00710.54570.18710.039*
C50.0016 (3)0.48064 (6)0.2776 (3)0.0265 (4)
H5−0.13070.48130.27360.032*
C60.1093 (3)0.44127 (6)0.3362 (3)0.0206 (4)
C70.0118 (3)0.39993 (6)0.3875 (3)0.0200 (4)
H7−0.10810.41050.41430.024*
C80.1367 (3)0.37472 (6)0.5690 (3)0.0231 (4)
H8A0.25200.36220.54460.035*
H8B0.06050.35010.59910.035*
H8C0.17760.39570.67970.035*
C9−0.2273 (2)0.34984 (5)0.1609 (2)0.0166 (4)
C10−0.1503 (3)0.31248 (6)−0.1043 (3)0.0199 (4)
H10A−0.18080.2819−0.16160.024*
H10B−0.16830.3343−0.21270.024*
C110.0888 (3)0.35748 (6)0.1119 (3)0.0184 (4)
H11A0.08100.38070.01100.022*
H11B0.22290.35780.20560.022*
C120.0994 (3)0.27654 (6)0.1633 (3)0.0231 (4)
H12A0.07570.24750.09400.035*
H12B0.01880.27850.24890.035*
H12C0.23730.27870.24200.035*
C13−0.4771 (3)0.30192 (6)−0.0593 (3)0.0226 (4)
H13A−0.57010.3204−0.01930.034*
H13B−0.46720.27190.00070.034*
H13C−0.52220.2988−0.20180.034*
U11U22U33U12U13U23
Cl10.0535 (4)0.0359 (3)0.0547 (4)−0.0206 (3)−0.0102 (3)0.0202 (3)
O10.0254 (7)0.0221 (7)0.0255 (7)0.0071 (5)0.0111 (6)0.0057 (5)
O20.0188 (7)0.0410 (8)0.0203 (7)0.0038 (6)0.0120 (5)0.0028 (6)
N10.0174 (8)0.0186 (7)0.0171 (7)0.0002 (6)0.0071 (6)−0.0011 (6)
N20.0142 (7)0.0210 (8)0.0176 (7)0.0000 (6)0.0057 (6)0.0004 (6)
N30.0165 (8)0.0198 (8)0.0185 (7)−0.0008 (6)0.0062 (6)−0.0019 (6)
N40.0190 (8)0.0220 (8)0.0207 (8)0.0039 (6)0.0100 (6)0.0035 (6)
N50.0151 (7)0.0233 (8)0.0155 (7)0.0002 (6)0.0045 (6)−0.0007 (6)
C10.0241 (10)0.0198 (9)0.0300 (10)−0.0014 (7)0.0026 (8)0.0005 (8)
C20.0260 (11)0.0310 (11)0.0346 (11)−0.0077 (8)0.0033 (9)0.0021 (9)
C30.0390 (12)0.0229 (10)0.0254 (10)−0.0100 (9)−0.0032 (9)0.0030 (8)
C40.0439 (13)0.0204 (10)0.0262 (11)0.0063 (9)0.0012 (9)0.0000 (8)
C50.0286 (10)0.0269 (10)0.0223 (10)0.0049 (8)0.0059 (8)−0.0039 (8)
C60.0249 (10)0.0188 (9)0.0164 (9)−0.0012 (7)0.0044 (7)−0.0038 (7)
C70.0206 (9)0.0214 (9)0.0184 (9)0.0015 (7)0.0067 (7)−0.0046 (7)
C80.0247 (10)0.0262 (10)0.0189 (9)−0.0005 (8)0.0075 (8)−0.0005 (7)
C90.0175 (9)0.0155 (8)0.0165 (8)0.0039 (7)0.0052 (7)0.0038 (7)
C100.0196 (9)0.0253 (10)0.0159 (8)−0.0008 (7)0.0073 (7)−0.0021 (7)
C110.0175 (9)0.0204 (9)0.0195 (9)−0.0012 (7)0.0088 (7)−0.0010 (7)
C120.0223 (10)0.0215 (9)0.0250 (10)0.0027 (7)0.0070 (8)0.0004 (7)
C130.0146 (9)0.0290 (10)0.0232 (9)−0.0024 (7)0.0045 (7)−0.0022 (8)
Cl1—C31.740 (2)C4—C51.383 (3)
O1—N51.2595 (19)C4—H40.9500
O2—N51.2522 (19)C5—C61.390 (3)
N1—C91.332 (2)C5—H50.9500
N1—C71.488 (2)C6—C71.516 (3)
N1—C111.490 (2)C7—C81.527 (3)
N2—C91.321 (2)C7—H71.0000
N2—C131.464 (2)C8—H8A0.9800
N2—C101.480 (2)C8—H8B0.9800
N3—C111.437 (2)C8—H8C0.9800
N3—C101.439 (2)C10—H10A0.9900
N3—C121.471 (2)C10—H10B0.9900
N4—N51.312 (2)C11—H11A0.9900
N4—C91.395 (2)C11—H11B0.9900
C1—C21.384 (3)C12—H12A0.9800
C1—C61.394 (3)C12—H12B0.9800
C1—H10.9500C12—H12C0.9800
C2—C31.379 (3)C13—H13A0.9800
C2—H20.9500C13—H13B0.9800
C3—C41.372 (3)C13—H13C0.9800
C9—N1—C7121.49 (14)C6—C7—H7107.3
C9—N1—C11119.58 (14)C8—C7—H7107.3
C7—N1—C11118.87 (13)C7—C8—H8A109.5
C9—N2—C13122.48 (15)C7—C8—H8B109.5
C9—N2—C10120.15 (14)H8A—C8—H8B109.5
C13—N2—C10117.16 (14)C7—C8—H8C109.5
C11—N3—C10108.91 (14)H8A—C8—H8C109.5
C11—N3—C12112.59 (14)H8B—C8—H8C109.5
C10—N3—C12113.18 (14)N2—C9—N1121.19 (15)
N5—N4—C9111.03 (14)N2—C9—N4119.45 (15)
O2—N5—O1120.71 (14)N1—C9—N4119.10 (15)
O2—N5—N4117.46 (14)N3—C10—N2111.35 (14)
O1—N5—N4121.83 (14)N3—C10—H10A109.4
C2—C1—C6120.84 (18)N2—C10—H10A109.4
C2—C1—H1119.6N3—C10—H10B109.4
C6—C1—H1119.6N2—C10—H10B109.4
C3—C2—C1119.5 (2)H10A—C10—H10B108.0
C3—C2—H2120.3N3—C11—N1111.63 (14)
C1—C2—H2120.3N3—C11—H11A109.3
C4—C3—C2121.07 (19)N1—C11—H11A109.3
C4—C3—Cl1119.65 (16)N3—C11—H11B109.3
C2—C3—Cl1119.28 (18)N1—C11—H11B109.3
C3—C4—C5119.04 (18)H11A—C11—H11B108.0
C3—C4—H4120.5N3—C12—H12A109.5
C5—C4—H4120.5N3—C12—H12B109.5
C4—C5—C6121.61 (19)H12A—C12—H12B109.5
C4—C5—H5119.2N3—C12—H12C109.5
C6—C5—H5119.2H12A—C12—H12C109.5
C5—C6—C1117.94 (17)H12B—C12—H12C109.5
C5—C6—C7119.32 (17)N2—C13—H13A109.5
C1—C6—C7122.73 (16)N2—C13—H13B109.5
N1—C7—C6109.73 (14)H13A—C13—H13B109.5
N1—C7—C8110.65 (14)N2—C13—H13C109.5
C6—C7—C8114.18 (15)H13A—C13—H13C109.5
N1—C7—H7107.3H13B—C13—H13C109.5
D—H···AD—HH···AD···AD—H···A
C8—H8A···O2i0.982.293.273 (2)178
C10—H10A···O1ii0.992.433.278 (2)143
C11—H11B···O2i0.992.493.434 (3)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8A⋯O2i0.982.293.273 (2)178
C10—H10A⋯O1ii0.992.433.278 (2)143
C11—H11B⋯O2i0.992.493.434 (3)160

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-5-Benzyl-1-methyl-N-nitro-1,3,5-triazinan-2-imine.

Authors:  Liang-Zhong Xu; Rui-Feng Yin; Hong-Xin Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-20

3.  1,5-Dimethyl-2-nitro-imino-1,3,5-tri-azinane.

Authors:  Cong Zhao; Wen-Ge Yang; Yong-Hong Hu; Lei Shen; Xiu-Tao Lu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-16

4.  1-(2-Chloro-1,3-thia-zol-5-ylmeth-yl)-3,5-dimethyl-2-nitrimino-1,2,3,4,5,6-hexa-hydro-1,3,5-triazine.

Authors:  Zhi-Qiang Hu; Xu-Dong Yang; Guang-Wei An; Zhi Yang; Liang-Zhong Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06
  4 in total

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