Literature DB >> 21589479

5,6-Diamino-1,3-benzodithiole-2-thione.

Fang-Ming Wang1.   

Abstract

The mol-ecule of the title compound, C(7)H(6)N(2)S(3), is almost planar, the dihedral angle between the benzene plane and the 1,3-dithiole-2-thione plane being 2.21 (6)°. In the crystal, mol-ecules are linked by inter-molecular N-H⋯S and N-H⋯N hydrogen bonds into a three-dimensional network. The crystal packing also exhibits weak inter-molecular S⋯S inter-actions [3.5681 (9) Å].

Entities:  

Year:  2010        PMID: 21589479      PMCID: PMC3011669          DOI: 10.1107/S1600536810046532

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to tetra­thio­fulvalene and its derivatives, see: Yamada & Sugimoto (2004 ▶). For the synthesis and properties of tetra­thio­fulvalene and its derivatives, see: Otsubo & Takimiya (2004 ▶); Krief (1986 ▶); Jia et al. (2007 ▶).

Experimental

Crystal data

C7H6N2S3 M = 214.35 Monoclinic, a = 5.7695 (9) Å b = 7.6130 (11) Å c = 19.993 (3) Å β = 94.265 (2)° V = 875.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.79 mm−1 T = 291 K 0.35 × 0.10 × 0.05 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.910, T max = 0.961 4517 measured reflections 1702 independent reflections 1521 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.097 S = 1.00 1702 reflections 133 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810046532/rz2516sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810046532/rz2516Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H6N2S3F(000) = 440
Mr = 214.35Dx = 1.626 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2863 reflections
a = 5.7695 (9) Åθ = 3.1–27.3°
b = 7.6130 (11) ŵ = 0.79 mm1
c = 19.993 (3) ÅT = 291 K
β = 94.265 (2)°Block, yellow
V = 875.7 (2) Å30.35 × 0.10 × 0.05 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1702 independent reflections
Radiation source: sealed tube1521 reflections with I > 2σ(I)
graphiteRint = 0.029
phi and ω scansθmax = 26.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −6→7
Tmin = 0.910, Tmax = 0.961k = −9→9
4517 measured reflectionsl = −20→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.097H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0558P)2 + 0.4807P] where P = (Fo2 + 2Fc2)/3
1702 reflections(Δ/σ)max < 0.001
133 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5326 (4)0.8170 (3)0.39432 (11)0.0350 (5)
C20.3149 (4)0.8999 (3)0.37772 (11)0.0334 (4)
C30.2459 (4)0.9342 (3)0.31133 (11)0.0316 (4)
C40.3887 (3)0.8872 (3)0.26093 (10)0.0305 (4)
C50.6025 (4)0.8080 (3)0.27734 (10)0.0312 (4)
C60.6739 (4)0.7722 (3)0.34410 (11)0.0332 (4)
C70.5787 (4)0.8467 (3)0.14729 (11)0.0369 (5)
H30.097 (5)0.992 (3)0.3011 (12)0.038 (6)*
H60.820 (4)0.719 (3)0.3564 (12)0.040 (6)*
H1A0.724 (6)0.720 (4)0.4636 (16)0.073 (10)*
H2A0.490 (7)0.760 (4)0.4841 (17)0.066 (10)*
H3A0.250 (5)0.978 (4)0.4623 (15)0.058 (9)*
H4A0.060 (6)0.999 (4)0.4153 (15)0.057 (8)*
N10.6017 (4)0.7889 (3)0.46186 (11)0.0482 (5)
N20.1723 (4)0.9361 (3)0.42920 (11)0.0465 (5)
S10.32535 (10)0.93005 (7)0.17590 (3)0.03893 (19)
S20.76856 (9)0.76272 (7)0.20996 (3)0.03781 (19)
S30.63040 (13)0.84730 (10)0.06737 (3)0.0540 (2)
U11U22U33U12U13U23
C10.0329 (11)0.0347 (10)0.0364 (11)0.0004 (8)−0.0046 (8)0.0003 (8)
C20.0290 (10)0.0325 (10)0.0383 (11)0.0010 (8)0.0003 (8)−0.0026 (8)
C30.0246 (10)0.0318 (10)0.0380 (11)0.0016 (8)−0.0013 (8)−0.0015 (8)
C40.0274 (10)0.0288 (9)0.0347 (10)−0.0011 (8)−0.0011 (8)0.0014 (8)
C50.0274 (10)0.0276 (9)0.0385 (11)−0.0005 (8)0.0006 (8)−0.0028 (8)
C60.0261 (10)0.0326 (10)0.0399 (11)0.0047 (8)−0.0037 (8)0.0011 (8)
C70.0378 (12)0.0344 (11)0.0382 (12)−0.0078 (9)0.0023 (9)−0.0027 (8)
N10.0430 (13)0.0641 (13)0.0362 (11)0.0132 (11)−0.0044 (9)0.0018 (10)
N20.0384 (11)0.0626 (14)0.0382 (11)0.0120 (10)0.0008 (9)−0.0053 (10)
S10.0351 (3)0.0450 (3)0.0360 (3)0.0018 (2)−0.0018 (2)0.0058 (2)
S20.0304 (3)0.0421 (3)0.0412 (3)0.0014 (2)0.0044 (2)−0.0036 (2)
S30.0592 (4)0.0666 (4)0.0368 (4)−0.0103 (3)0.0088 (3)−0.0028 (3)
C1—C61.382 (3)C5—S21.745 (2)
C1—N11.396 (3)C6—H60.95 (3)
C1—C21.423 (3)C7—S31.647 (2)
C2—C31.382 (3)C7—S21.725 (2)
C2—N21.392 (3)C7—S11.730 (2)
C3—C41.395 (3)N1—H1A0.88 (4)
C3—H30.97 (3)N1—H2A0.84 (4)
C4—C51.390 (3)N2—H3A0.83 (3)
C4—S11.743 (2)N2—H4A0.84 (3)
C5—C61.394 (3)
C6—C1—N1121.6 (2)C1—C6—C5119.9 (2)
C6—C1—C2119.9 (2)C1—C6—H6118.4 (14)
N1—C1—C2118.5 (2)C5—C6—H6121.7 (15)
C3—C2—N2121.9 (2)S3—C7—S2123.70 (14)
C3—C2—C1119.6 (2)S3—C7—S1122.57 (14)
N2—C2—C1118.4 (2)S2—C7—S1113.73 (13)
C2—C3—C4120.15 (19)C1—N1—H1A108 (2)
C2—C3—H3118.3 (14)C1—N1—H2A112 (2)
C4—C3—H3121.6 (14)H1A—N1—H2A118 (3)
C5—C4—C3120.12 (19)C2—N2—H3A110 (2)
C5—C4—S1115.43 (16)C2—N2—H4A111 (2)
C3—C4—S1124.37 (16)H3A—N2—H4A114 (3)
C4—C5—C6120.3 (2)C7—S1—C497.64 (10)
C4—C5—S2115.60 (16)C7—S2—C597.59 (10)
C6—C5—S2124.07 (16)
C6—C1—C2—C30.3 (3)N1—C1—C6—C5−177.7 (2)
N1—C1—C2—C3178.0 (2)C2—C1—C6—C5−0.2 (3)
C6—C1—C2—N2177.2 (2)C4—C5—C6—C1−0.6 (3)
N1—C1—C2—N2−5.2 (3)S2—C5—C6—C1178.36 (16)
N2—C2—C3—C4−176.5 (2)S3—C7—S1—C4180.00 (14)
C1—C2—C3—C40.2 (3)S2—C7—S1—C40.34 (13)
C2—C3—C4—C5−1.0 (3)C5—C4—S1—C70.28 (17)
C2—C3—C4—S1−177.76 (16)C3—C4—S1—C7177.22 (18)
C3—C4—C5—C61.1 (3)S3—C7—S2—C5179.66 (14)
S1—C4—C5—C6178.20 (16)S1—C7—S2—C5−0.69 (13)
C3—C4—C5—S2−177.88 (15)C4—C5—S2—C70.90 (17)
S1—C4—C5—S2−0.8 (2)C6—C5—S2—C7−178.06 (18)
D—H···AD—HH···AD···AD—H···A
N1—H2A···S3i0.84 (4)2.87 (4)3.711 (3)176 (3)
N2—H3A···N1ii0.83 (3)2.45 (3)3.226 (3)156 (3)
N2—H4A···S3iii0.84 (3)2.90 (3)3.588 (2)141 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H2A⋯S3i0.84 (4)2.87 (4)3.711 (3)176 (3)
N2—H3A⋯N1ii0.83 (3)2.45 (3)3.226 (3)156 (3)
N2—H4A⋯S3iii0.84 (3)2.90 (3)3.588 (2)141 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An experimental and computational study on intramolecular charge transfer: a tetrathiafulvalene-fused dipyridophenazine molecule.

Authors:  Chunyang Jia; Shi-Xia Liu; Christian Tanner; Claudia Leiggener; Antonia Neels; Lionel Sanguinet; Eric Levillain; Samuel Leutwyler; Andreas Hauser; Silvio Decurtins
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

  2 in total

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