Literature DB >> 21589477

1-Benzoyl-3-[4-(3-benzoyl-thio-ureido)phen-yl]thio-urea.

Wong Woei Hung1, Mohammad B Kassim.   

Abstract

The mol-ecule of the title compound, C(22)H(18)N(4)O(2)S(2), lies across a crystallographic inversion centre. The mol-ecule adopts a syn-anti configuration with respect to the positions of the carbonyl groups and terminal phenyl rings relative to the thione S atom across the C-N bond. There are two intra-molecular N-H⋯O and C-H⋯S hydrogen bonds within each molecule, resulting in the formation of four six-membered S(6) rings. The central and terminal rings make a dihedral angle of 13.55 (15)°. In the crystal, mol-ecules are linked by inter-molecular C-H⋯S hydrogen bonds, forming R(2) (2)(14) rings and resulting in zigzag chains.

Entities:  

Year:  2010        PMID: 21589477      PMCID: PMC3011532          DOI: 10.1107/S160053681004599X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds and structural parameters, see: Hung et al. (2010 ▶), Thiam et al. (2008 ▶); Arslan et al. (2004 ▶); Yamin et al., (2003 ▶). For bond-length data, see: Allen et al. (197) ▶. For hydrogen-bond motifs, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C22H18N4O2S2 M = 434.52 Monoclinic, a = 11.513 (4) Å b = 4.5279 (16) Å c = 20.209 (7) Å β = 101.146 (7)° V = 1033.6 (6) Å3 Z = 2 Mo Kα radiation μ = 0.29 mm−1 T = 298 K 0.50 × 0.15 × 0.13 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.950, T max = 0.964 6173 measured reflections 2142 independent reflections 1529 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.171 S = 1.14 2142 reflections 136 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681004599X/dn2618sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681004599X/dn2618Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H18N4O2S2F(000) = 452
Mr = 434.52Dx = 1.396 Mg m3
Monoclinic, P21/nMelting point: 511 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 11.513 (4) ÅCell parameters from 1244 reflections
b = 4.5279 (16) Åθ = 1.9–26.5°
c = 20.209 (7) ŵ = 0.28 mm1
β = 101.146 (7)°T = 298 K
V = 1033.6 (6) Å3Needle, yellow
Z = 20.50 × 0.15 × 0.13 mm
Bruker SMART APEX CCD area-detector diffractometer2142 independent reflections
Radiation source: fine-focus sealed tube1529 reflections with I > 2σ(I)
graphiteRint = 0.040
ω scanθmax = 26.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −11→14
Tmin = 0.950, Tmax = 0.964k = −5→5
6173 measured reflectionsl = −25→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.171H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0839P)2 + 0.1163P] where P = (Fo2 + 2Fc2)/3
2142 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.16597 (7)0.6404 (2)1.04023 (4)0.0663 (4)
O10.25185 (19)0.2798 (6)0.84661 (10)0.0637 (7)
N10.14062 (19)0.3425 (5)0.92651 (10)0.0425 (6)
H1A0.07670.28520.93880.051*
N20.30760 (19)0.6294 (5)0.94925 (11)0.0432 (6)
H2A0.31490.55460.91120.052*
C10.0805 (3)−0.0367 (8)0.76267 (15)0.0643 (10)
H10.14540.03440.74640.077*
C2−0.0026 (4)−0.2077 (10)0.72171 (17)0.0836 (13)
H20.0062−0.25060.67790.100*
C3−0.0988 (3)−0.3159 (8)0.74552 (18)0.0709 (11)
H3−0.1557−0.42860.71760.085*
C4−0.1102 (3)−0.2566 (8)0.81058 (16)0.0563 (8)
H4−0.1742−0.33230.82700.068*
C5−0.0271 (3)−0.0849 (7)0.85172 (14)0.0465 (7)
H5−0.0352−0.04670.89580.056*
C60.0684 (2)0.0310 (6)0.82792 (13)0.0422 (7)
C70.1604 (2)0.2252 (7)0.86697 (13)0.0425 (7)
C80.2103 (2)0.5429 (6)0.97010 (13)0.0407 (7)
C90.4014 (2)0.8203 (6)0.97749 (12)0.0386 (7)
C100.4932 (2)0.8417 (7)0.94239 (13)0.0478 (8)
H100.48870.73330.90290.057*
C110.4091 (2)0.9828 (7)1.03623 (13)0.0472 (8)
H110.34900.97341.06100.057*
U11U22U33U12U13U23
S10.0557 (5)0.0955 (8)0.0554 (5)−0.0286 (5)0.0299 (4)−0.0292 (5)
O10.0538 (13)0.0916 (19)0.0525 (12)−0.0245 (12)0.0274 (10)−0.0201 (12)
N10.0372 (12)0.0525 (16)0.0409 (12)−0.0114 (11)0.0155 (10)−0.0048 (11)
N20.0427 (13)0.0514 (15)0.0378 (12)−0.0114 (11)0.0136 (10)−0.0052 (10)
C10.068 (2)0.081 (3)0.0476 (18)−0.0252 (19)0.0218 (15)−0.0127 (17)
C20.104 (3)0.103 (3)0.0458 (19)−0.041 (3)0.0214 (19)−0.025 (2)
C30.071 (2)0.074 (3)0.064 (2)−0.024 (2)0.0035 (18)−0.0142 (19)
C40.0462 (18)0.060 (2)0.064 (2)−0.0110 (15)0.0133 (15)−0.0022 (17)
C50.0475 (16)0.0525 (19)0.0415 (14)−0.0021 (14)0.0131 (12)−0.0058 (13)
C60.0457 (16)0.0428 (17)0.0390 (14)−0.0002 (13)0.0103 (12)−0.0013 (13)
C70.0452 (16)0.0465 (18)0.0373 (15)−0.0027 (13)0.0120 (12)0.0019 (12)
C80.0399 (15)0.0432 (17)0.0401 (14)−0.0026 (13)0.0103 (11)0.0044 (12)
C90.0399 (15)0.0430 (17)0.0333 (13)−0.0032 (12)0.0078 (11)0.0037 (12)
C100.0487 (17)0.058 (2)0.0397 (15)−0.0101 (14)0.0149 (13)−0.0109 (14)
C110.0425 (16)0.060 (2)0.0433 (15)−0.0087 (14)0.0188 (12)−0.0040 (14)
S1—C81.656 (3)C3—C41.373 (5)
O1—C71.227 (3)C3—H30.9300
N1—C71.374 (3)C4—C51.380 (4)
N1—C81.403 (3)C4—H40.9300
N1—H1A0.8600C5—C61.386 (4)
N2—C81.330 (3)C5—H50.9300
N2—C91.415 (3)C6—C71.481 (4)
N2—H2A0.8600C9—C111.385 (4)
C1—C21.376 (5)C9—C101.385 (4)
C1—C61.386 (4)C10—C11i1.376 (4)
C1—H10.9300C10—H100.9300
C2—C31.381 (5)C11—C10i1.376 (4)
C2—H20.9300C11—H110.9300
C7—N1—C8128.9 (2)C6—C5—H5119.7
C7—N1—H1A115.5C5—C6—C1118.6 (3)
C8—N1—H1A115.5C5—C6—C7125.0 (2)
C8—N2—C9132.6 (2)C1—C6—C7116.5 (3)
C8—N2—H2A113.7O1—C7—N1120.9 (3)
C9—N2—H2A113.7O1—C7—C6120.8 (2)
C2—C1—C6120.8 (3)N1—C7—C6118.3 (2)
C2—C1—H1119.6N2—C8—N1113.9 (2)
C6—C1—H1119.6N2—C8—S1127.6 (2)
C1—C2—C3120.1 (3)N1—C8—S1118.45 (19)
C1—C2—H2120.0C11—C9—C10118.2 (2)
C3—C2—H2120.0C11—C9—N2126.0 (2)
C4—C3—C2119.7 (3)C10—C9—N2115.8 (2)
C4—C3—H3120.1C11i—C10—C9122.5 (3)
C2—C3—H3120.1C11i—C10—H10118.8
C3—C4—C5120.2 (3)C9—C10—H10118.8
C3—C4—H4119.9C10i—C11—C9119.3 (2)
C5—C4—H4119.9C10i—C11—H11120.4
C4—C5—C6120.6 (3)C9—C11—H11120.4
C4—C5—H5119.7
C6—C1—C2—C3−0.4 (7)C5—C6—C7—N1−11.9 (4)
C1—C2—C3—C4−1.2 (7)C1—C6—C7—N1168.0 (3)
C2—C3—C4—C51.2 (6)C9—N2—C8—N1−178.7 (3)
C3—C4—C5—C60.4 (5)C9—N2—C8—S10.3 (5)
C4—C5—C6—C1−1.9 (5)C7—N1—C8—N20.7 (4)
C4—C5—C6—C7177.9 (3)C7—N1—C8—S1−178.4 (2)
C2—C1—C6—C52.0 (5)C8—N2—C9—C11−3.8 (5)
C2—C1—C6—C7−177.9 (3)C8—N2—C9—C10175.8 (3)
C8—N1—C7—O13.9 (5)C11—C9—C10—C11i0.0 (5)
C8—N1—C7—C6−176.1 (3)N2—C9—C10—C11i−179.6 (3)
C5—C6—C7—O1168.1 (3)C10—C9—C11—C10i0.0 (5)
C1—C6—C7—O1−12.0 (5)N2—C9—C11—C10i179.6 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O10.861.852.590 (3)144
C11—H11···S10.932.563.215 (3)128
C5—H5···S1ii0.932.843.567 (3)136
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O10.861.852.590 (3)144
C11—H11⋯S10.932.563.215 (3)128
C5—H5⋯S1i0.932.843.567 (3)136

Symmetry code: (i) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  1,2-Bis(N'-benzoyl-thio-ureido)benzene.

Authors:  Elhadj Ibrahima Thiam; Mayoro Diop; Mohamed Gaye; Abdou Salam Sall; Aliou Hamady Barry
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-02

4.  1,1'-Diphenyl-3,3'-(p-phenyl-enedicarbon-yl)dithio-urea.

Authors:  Wong W Hung; Ibrahim N Hassan; Bohari M Yamin; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-09

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  2 in total

1.  1,2-Bis(N'-benzoyl-thio-ureido)-4-chloro-benzene.

Authors:  Bohari M Yamin; Uwaisulqarni M Osman
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07

2.  3,3'-Dibenzoyl-1,1'-dibenzyl-1,1'-(ethane-1,2-di-yl)-dithio-urea.

Authors:  Andrzej Okuniewski; Jaroslaw Chojnacki; Barbara Becker
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04
  2 in total

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