| Literature DB >> 21589366 |
Mariana Elizondo García, Sylvain Bernès, Nancy Pérez Rodríguez, Perla Elizondo Martínez.
Abstract
The title Schiff base, C(27)H(33)N(7), is a tripodal amine displaying C(3) symmetry, with the central tertiary N atom lying on the threefold crystallographic axis. The N-CH(2)-CH(2)-N conformation of the pendant arms is gauche [torsion angle = 76.1 (3)°], which results in a claw-like mol-ecule, with the terminal aniline groups wrapped around the symmetry axis. The lone pair of the apical N atom is clearly oriented inwards towards the cavity, and should thus be chemically inactive. The amine NH(2) substituents lie in the plane of the benzene ring to which they are bonded. With such an arrangement, one amine H atom forms an S(6) motif through a weak N-H⋯N hydrogen bond with the imine N atom, while the other is engaged in an inter-molecular N-H⋯π contact involving the benzene ring of a neighbouring mol-ecule related by inversion. The benzene rings also participate in an intra-molecular C-H⋯π contact of similar strength. In the crystal structure, mol-ecules are separated by empty voids (ca 5% of the crystal volume), although the crystal seems to be unsolvated.Entities:
Year: 2010 PMID: 21589366 PMCID: PMC3011466 DOI: 10.1107/S1600536810043783
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C27H33N7 | |
| Melting point: 416 K | |
| Trigonal, | Mo |
| Hall symbol: -R 3 | Cell parameters from 70 reflections |
| θ = 4.8–12.3° | |
| µ = 0.07 mm−1 | |
| Prism, yellow | |
| 0.40 × 0.40 × 0.18 mm |
| Siemens P4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 2.0° |
| graphite | |
| ω scans | |
| 6668 measured reflections | |
| 1507 independent reflections | 2 standard reflections every 98 reflections |
| 838 reflections with | intensity decay: 2% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 1507 reflections | Δρmax = 0.51 e Å−3 |
| 110 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Extinction correction: |
| 0 constraints | Extinction coefficient: 0.0057 (9) |
| Primary atom site location: structure-invariant direct methods |
| N1 | 1.0000 | 1.0000 | 0.17108 (11) | 0.0773 (10) | |
| C2 | 0.9753 (3) | 0.8840 (2) | 0.15415 (9) | 0.0952 (9) | |
| H2A | 1.0068 | 0.8904 | 0.1198 | 0.114* | |
| H2B | 0.8906 | 0.8322 | 0.1524 | 0.114* | |
| C3 | 1.0266 (3) | 0.8305 (3) | 0.18909 (10) | 0.0990 (10) | |
| H3A | 1.0287 | 0.7663 | 0.1714 | 0.119* | |
| H3B | 1.1069 | 0.8892 | 0.1978 | 0.119* | |
| N4 | 0.95737 (19) | 0.78635 (19) | 0.23590 (8) | 0.0821 (7) | |
| C5 | 1.0077 (2) | 0.8295 (2) | 0.27831 (10) | 0.0741 (7) | |
| H5A | 1.0862 | 0.8891 | 0.2776 | 0.089* | |
| C6 | 0.9507 (2) | 0.79175 (19) | 0.32820 (9) | 0.0680 (7) | |
| C7 | 1.0149 (2) | 0.8459 (2) | 0.37218 (10) | 0.0825 (8) | |
| H7A | 1.0933 | 0.9045 | 0.3688 | 0.099* | |
| C8 | 0.9669 (3) | 0.8163 (3) | 0.42032 (11) | 0.0985 (9) | |
| H8A | 1.0120 | 0.8540 | 0.4492 | 0.118* | |
| C9 | 0.8505 (3) | 0.7297 (3) | 0.42536 (10) | 0.0915 (9) | |
| H9A | 0.8165 | 0.7096 | 0.4579 | 0.110* | |
| C10 | 0.7853 (3) | 0.6738 (2) | 0.38354 (10) | 0.0820 (8) | |
| H10A | 0.7073 | 0.6147 | 0.3879 | 0.098* | |
| C11 | 0.8319 (2) | 0.7026 (2) | 0.33419 (9) | 0.0696 (7) | |
| N12 | 0.7651 (2) | 0.6450 (2) | 0.29267 (9) | 0.0958 (8) | |
| H12A | 0.792 (3) | 0.670 (3) | 0.2599 (10) | 0.115* | |
| H12B | 0.692 (3) | 0.597 (3) | 0.2993 (11) | 0.115* |
| N1 | 0.0863 (15) | 0.0863 (15) | 0.0592 (18) | 0.0432 (8) | 0.000 | 0.000 |
| C2 | 0.116 (2) | 0.101 (2) | 0.0686 (14) | 0.0545 (18) | 0.0064 (14) | −0.0093 (14) |
| C3 | 0.118 (2) | 0.098 (2) | 0.0928 (18) | 0.0631 (19) | 0.0324 (16) | 0.0059 (15) |
| N4 | 0.0836 (15) | 0.0817 (14) | 0.0848 (14) | 0.0442 (12) | 0.0142 (12) | 0.0027 (11) |
| C5 | 0.0668 (15) | 0.0620 (14) | 0.0941 (17) | 0.0327 (12) | 0.0095 (13) | 0.0063 (13) |
| C6 | 0.0648 (15) | 0.0560 (13) | 0.0840 (16) | 0.0307 (12) | 0.0009 (12) | 0.0046 (11) |
| C7 | 0.0821 (17) | 0.0684 (16) | 0.0913 (18) | 0.0333 (14) | −0.0097 (14) | 0.0050 (13) |
| C8 | 0.121 (3) | 0.094 (2) | 0.0859 (18) | 0.058 (2) | −0.0204 (18) | −0.0012 (16) |
| C9 | 0.112 (2) | 0.094 (2) | 0.0842 (18) | 0.063 (2) | 0.0122 (16) | 0.0217 (16) |
| C10 | 0.0820 (17) | 0.0778 (17) | 0.0947 (18) | 0.0463 (14) | 0.0110 (15) | 0.0148 (14) |
| C11 | 0.0679 (15) | 0.0647 (14) | 0.0832 (15) | 0.0384 (13) | 0.0025 (13) | −0.0001 (13) |
| N12 | 0.0638 (14) | 0.1025 (18) | 0.1008 (16) | 0.0263 (13) | 0.0001 (13) | −0.0157 (14) |
| N1—C2 | 1.455 (3) | C6—C11 | 1.413 (3) |
| N1—C2i | 1.455 (3) | C7—C8 | 1.366 (4) |
| N1—C2ii | 1.455 (3) | C7—H7A | 0.9300 |
| C2—C3 | 1.498 (4) | C8—C9 | 1.379 (4) |
| C2—H2A | 0.9700 | C8—H8A | 0.9300 |
| C2—H2B | 0.9700 | C9—C10 | 1.350 (4) |
| C3—N4 | 1.454 (3) | C9—H9A | 0.9300 |
| C3—H3A | 0.9700 | C10—C11 | 1.389 (3) |
| C3—H3B | 0.9700 | C10—H10A | 0.9300 |
| N4—C5 | 1.264 (3) | C11—N12 | 1.356 (3) |
| C5—C6 | 1.454 (3) | N12—H12A | 0.92 (3) |
| C5—H5A | 0.9300 | N12—H12B | 0.86 (3) |
| C6—C7 | 1.386 (3) | ||
| C2—N1—C2i | 111.28 (14) | C7—C6—C5 | 119.0 (2) |
| C2—N1—C2ii | 111.28 (14) | C11—C6—C5 | 123.1 (2) |
| C2i—N1—C2ii | 111.28 (14) | C8—C7—C6 | 122.3 (3) |
| N1—C2—C3 | 112.9 (2) | C8—C7—H7A | 118.8 |
| N1—C2—H2A | 109.0 | C6—C7—H7A | 118.8 |
| C3—C2—H2A | 109.0 | C7—C8—C9 | 118.9 (3) |
| N1—C2—H2B | 109.0 | C7—C8—H8A | 120.5 |
| C3—C2—H2B | 109.0 | C9—C8—H8A | 120.5 |
| H2A—C2—H2B | 107.8 | C10—C9—C8 | 120.7 (3) |
| N4—C3—C2 | 110.9 (2) | C10—C9—H9A | 119.7 |
| N4—C3—H3A | 109.5 | C8—C9—H9A | 119.7 |
| C2—C3—H3A | 109.5 | C9—C10—C11 | 121.5 (3) |
| N4—C3—H3B | 109.5 | C9—C10—H10A | 119.2 |
| C2—C3—H3B | 109.5 | C11—C10—H10A | 119.2 |
| H3A—C3—H3B | 108.1 | N12—C11—C10 | 120.6 (2) |
| C5—N4—C3 | 118.0 (2) | N12—C11—C6 | 120.7 (2) |
| N4—C5—C6 | 124.1 (2) | C10—C11—C6 | 118.7 (2) |
| N4—C5—H5A | 117.9 | C11—N12—H12A | 120.7 (19) |
| C6—C5—H5A | 117.9 | C11—N12—H12B | 115 (2) |
| C7—C6—C11 | 117.9 (2) | H12A—N12—H12B | 123 (3) |
| C2i—N1—C2—C3 | 83.1 (3) | C6—C7—C8—C9 | −0.1 (4) |
| C2ii—N1—C2—C3 | −152.1 (3) | C7—C8—C9—C10 | 0.9 (4) |
| N1—C2—C3—N4 | 76.1 (3) | C8—C9—C10—C11 | −1.1 (4) |
| C2—C3—N4—C5 | −119.7 (3) | C9—C10—C11—N12 | 179.7 (2) |
| C3—N4—C5—C6 | −178.2 (2) | C9—C10—C11—C6 | 0.6 (3) |
| N4—C5—C6—C7 | −179.8 (2) | C7—C6—C11—N12 | −178.9 (2) |
| N4—C5—C6—C11 | −0.3 (4) | C5—C6—C11—N12 | 1.6 (3) |
| C11—C6—C7—C8 | −0.3 (4) | C7—C6—C11—C10 | 0.1 (3) |
| C5—C6—C7—C8 | 179.1 (2) | C5—C6—C11—C10 | −179.3 (2) |
| H··· | ||||
| N12—H12A···N4 | 0.92 (3) | 2.02 (3) | 2.700 (3) | 129 (2) |
| N12—H12B···Cgiii | 0.86 (3) | 2.70 (3) | 3.430 (2) | 143 (3) |
| C7—H7A···Cgi | 0.93 | 2.71 | 3.494 (3) | 143 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the benzene ring.
| H⋯ | ||||
|---|---|---|---|---|
| N12—H12 | 0.92 (3) | 2.02 (3) | 2.700 (3) | 129 (2) |
| N12—H12 | 0.86 (3) | 2.70 (3) | 3.430 (2) | 143 (3) |
| C7—H7 | 0.93 | 2.71 | 3.494 (3) | 143 |
Symmetry codes: (i) ; (ii) .