Literature DB >> 21589318

Bis(μ-5-carb-oxy-benzene-1,3-dicarboxyl-ato)-κO,O:O;κO:O,O-bis-[(2-phenyl-1,3,7,8-tetra-aza-cyclo-penta-[l]phenanthrene-κN,N)lead(II)].

Jing Chen1, Xiang-Cheng Wang, Chun-Xiang Li.   

Abstract

In the title compound, [Pb(2)(C(9)H(4)O(6))(2)(C(19)H(12)N(4))(2)], the Pb(II) atom is five-coordinated by two N atoms from a chelating 2-phenyl-1H-1,3,7,8-tetra-aza-cyclo-penta-[l]phenanthrene (L) ligand and three O atoms from two Hbtc ligands (H(3)btc is benzene-1,3,5-tricarb-oxy-lic acid), resulting in a distorted PbN(2)O(3) coordination. Two Pb(II) atoms are bridged by the Hbtc ligands, forming a discrete centrosymmetric dinuclear complex. Inter-molecular N-H⋯O and O-H⋯O hydrogen bonds and π-π inter-actions between the pyridine and imidazole rings, and between the pyridyl rings of the L ligands [centroid-centroid distances = 3.600 (6) and 3.732 (6) Å] lead to a three-dimensional supra-molecular structure.

Entities:  

Year:  2010        PMID: 21589318      PMCID: PMC3011518          DOI: 10.1107/S1600536810045812

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the structures and potential applications of supra­molecular architectures, see: Che et al. (2008 ▶). For a related structure, see: Liu et al. (2009 ▶). For the ligand synthesis, see: Steck & Day (1943 ▶).

Experimental

Crystal data

[Pb2(C9H4O6)2(C19H12N4)2] M = 1423.28 Triclinic, a = 9.2776 (3) Å b = 11.4409 (5) Å c = 12.2764 (6) Å α = 73.820 (4)° β = 72.754 (4)° γ = 68.680 (4)° V = 1137.74 (9) Å3 Z = 1 Mo Kα radiation μ = 7.47 mm−1 T = 292 K 0.30 × 0.26 × 0.23 mm

Data collection

Oxford Diffraction Gemini R Ultra CCD diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006 ▶) T min = 0.122, T max = 0.179 5399 measured reflections 3979 independent reflections 3547 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.055 S = 1.00 3979 reflections 352 parameters H-atom parameters constrained Δρmax = 0.82 e Å−3 Δρmin = −1.28 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2006 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810045812/hy2360sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810045812/hy2360Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pb2(C9H4O6)2(C19H12N4)2]Z = 1
Mr = 1423.28F(000) = 684
Triclinic, P1Dx = 2.077 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.2776 (3) ÅCell parameters from 6223 reflections
b = 11.4409 (5) Åθ = 4.3–29.1°
c = 12.2764 (6) ŵ = 7.47 mm1
α = 73.820 (4)°T = 292 K
β = 72.754 (4)°Block, yellow
γ = 68.680 (4)°0.30 × 0.26 × 0.23 mm
V = 1137.74 (9) Å3
Oxford Diffraction Gemini R Ultra CCD diffractometer3979 independent reflections
Radiation source: fine-focus sealed tube3547 reflections with I > 2σ(I)
graphiteRint = 0.021
ω scansθmax = 25.0°, θmin = 4.3°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006)h = −11→11
Tmin = 0.122, Tmax = 0.179k = −12→13
5399 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.055H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0349P)2] where P = (Fo2 + 2Fc2)/3
3979 reflections(Δ/σ)max = 0.006
352 parametersΔρmax = 0.82 e Å3
0 restraintsΔρmin = −1.28 e Å3
xyzUiso*/Ueq
C10.7189 (5)0.2900 (4)0.0863 (4)0.0311 (11)
H10.62080.35280.08920.037*
C20.8282 (6)0.2868 (5)−0.0199 (4)0.0340 (11)
H20.80240.3455−0.08620.041*
C30.9727 (5)0.1970 (4)−0.0252 (4)0.0284 (10)
H31.04730.1940−0.09520.034*
C41.0091 (5)0.1086 (4)0.0756 (4)0.0230 (9)
C51.1546 (5)0.0094 (4)0.0827 (4)0.0235 (9)
C61.1849 (5)−0.0717 (4)0.1856 (4)0.0219 (9)
C71.0700 (4)−0.0637 (4)0.2914 (3)0.0183 (8)
C81.0944 (5)−0.1447 (4)0.3980 (4)0.0236 (9)
H81.1921−0.20580.40360.028*
C90.9727 (5)−0.1323 (4)0.4929 (4)0.0257 (10)
H90.9871−0.18480.56430.031*
C100.8272 (5)−0.0415 (4)0.4835 (4)0.0239 (9)
H100.7448−0.03610.54910.029*
C110.9200 (5)0.0296 (4)0.2884 (3)0.0188 (8)
C120.8917 (5)0.1180 (4)0.1795 (3)0.0207 (9)
C131.3926 (5)−0.1295 (4)0.0540 (4)0.0251 (9)
C141.5482 (5)−0.2019 (4)−0.0049 (4)0.0248 (9)
C191.6161 (5)−0.1588 (5)−0.1198 (4)0.0335 (11)
H191.5631−0.0815−0.16140.040*
C181.7622 (6)−0.2314 (5)−0.1714 (4)0.0407 (13)
H181.8074−0.2031−0.24830.049*
C171.8423 (6)−0.3458 (6)−0.1105 (5)0.0493 (15)
H171.9410−0.3941−0.14620.059*
C260.2977 (4)0.2718 (4)0.6601 (3)0.0183 (8)
C240.1360 (5)0.3197 (4)0.6642 (3)0.0219 (9)
H240.07840.26380.67640.026*
C230.0600 (5)0.4498 (4)0.6502 (4)0.0206 (9)
C220.1453 (5)0.5317 (4)0.6363 (4)0.0223 (9)
H220.09480.61940.62550.027*
C210.3059 (4)0.4849 (4)0.6381 (4)0.0203 (9)
C250.3821 (4)0.3546 (4)0.6483 (3)0.0191 (9)
H250.49010.32260.64720.023*
C270.3789 (5)0.1300 (4)0.6694 (4)0.0204 (9)
C28−0.1124 (5)0.5072 (4)0.6481 (4)0.0230 (9)
C200.3893 (5)0.5775 (4)0.6332 (4)0.0224 (9)
C161.7755 (6)−0.3883 (6)0.0038 (5)0.0504 (15)
H161.8298−0.46510.04520.060*
C151.6285 (6)−0.3171 (5)0.0564 (4)0.0380 (12)
H151.5834−0.34620.13300.046*
N10.7482 (4)0.2074 (3)0.1833 (3)0.0232 (8)
N20.8010 (4)0.0378 (3)0.3847 (3)0.0191 (7)
N41.2883 (4)−0.0273 (3)−0.0012 (3)0.0244 (8)
H41.30370.0068−0.07390.029*
N31.3343 (4)−0.1584 (4)0.1674 (3)0.0259 (8)
O30.4905 (4)0.0925 (3)0.5863 (3)0.0346 (8)
O20.3312 (4)0.0561 (3)0.7562 (3)0.0312 (7)
O10.3317 (3)0.6937 (3)0.5876 (3)0.0281 (7)
O60.5074 (3)0.5389 (3)0.6780 (3)0.0380 (8)
O5−0.1757 (3)0.6197 (3)0.6241 (3)0.0371 (8)
O4−0.1880 (3)0.4204 (3)0.6780 (3)0.0395 (8)
H4A−0.28150.45610.67550.059*
Pb0.537207 (17)0.188377 (15)0.371460 (14)0.02330 (7)
U11U22U33U12U13U23
C10.032 (2)0.023 (2)0.035 (3)−0.0044 (19)−0.012 (2)0.000 (2)
C20.042 (3)0.029 (3)0.024 (2)−0.007 (2)−0.014 (2)0.007 (2)
C30.036 (2)0.028 (2)0.017 (2)−0.011 (2)−0.0024 (19)0.000 (2)
C40.026 (2)0.023 (2)0.020 (2)−0.0090 (18)−0.0063 (18)−0.0022 (18)
C50.024 (2)0.024 (2)0.023 (2)−0.0074 (18)−0.0021 (18)−0.0083 (19)
C60.022 (2)0.024 (2)0.021 (2)−0.0061 (18)−0.0059 (18)−0.0061 (19)
C70.020 (2)0.021 (2)0.016 (2)−0.0078 (16)−0.0030 (17)−0.0051 (17)
C80.026 (2)0.018 (2)0.022 (2)−0.0015 (17)−0.0045 (18)−0.0030 (18)
C90.031 (2)0.024 (2)0.015 (2)−0.0024 (19)−0.0059 (19)−0.0004 (18)
C100.027 (2)0.024 (2)0.016 (2)−0.0069 (18)−0.0001 (18)−0.0027 (19)
C110.022 (2)0.020 (2)0.017 (2)−0.0097 (17)−0.0022 (17)−0.0051 (17)
C120.028 (2)0.019 (2)0.016 (2)−0.0071 (17)−0.0076 (18)−0.0024 (17)
C130.022 (2)0.029 (2)0.022 (2)−0.0086 (18)−0.0009 (18)−0.007 (2)
C140.023 (2)0.032 (3)0.021 (2)−0.0108 (19)0.0004 (18)−0.010 (2)
C190.030 (2)0.039 (3)0.027 (2)−0.006 (2)−0.002 (2)−0.009 (2)
C180.031 (3)0.059 (4)0.026 (3)−0.010 (2)0.003 (2)−0.013 (3)
C170.033 (3)0.056 (4)0.050 (4)0.003 (3)−0.003 (3)−0.027 (3)
C260.020 (2)0.020 (2)0.013 (2)−0.0057 (16)−0.0014 (16)−0.0024 (17)
C240.023 (2)0.023 (2)0.022 (2)−0.0109 (18)−0.0027 (18)−0.0046 (18)
C230.019 (2)0.022 (2)0.022 (2)−0.0048 (17)−0.0064 (17)−0.0042 (18)
C220.022 (2)0.017 (2)0.024 (2)−0.0020 (17)−0.0048 (18)−0.0033 (18)
C210.018 (2)0.018 (2)0.023 (2)−0.0045 (16)−0.0051 (17)−0.0022 (18)
C250.0150 (19)0.018 (2)0.020 (2)−0.0027 (16)−0.0007 (16)−0.0034 (17)
C270.020 (2)0.019 (2)0.025 (2)−0.0054 (17)−0.0094 (19)−0.0044 (19)
C280.017 (2)0.026 (2)0.024 (2)−0.0057 (18)−0.0034 (18)−0.0049 (19)
C200.017 (2)0.024 (2)0.025 (2)−0.0067 (17)0.0019 (18)−0.0089 (19)
C160.044 (3)0.046 (3)0.047 (3)0.006 (3)−0.010 (3)−0.014 (3)
C150.039 (3)0.036 (3)0.027 (3)0.003 (2)−0.007 (2)−0.008 (2)
N10.0248 (18)0.0207 (19)0.0231 (19)−0.0057 (15)−0.0088 (15)−0.0008 (16)
N20.0187 (16)0.0216 (18)0.0160 (18)−0.0080 (14)−0.0015 (14)−0.0024 (15)
N40.0246 (18)0.027 (2)0.0182 (19)−0.0072 (15)0.0006 (15)−0.0051 (16)
N30.0224 (18)0.030 (2)0.021 (2)−0.0047 (16)−0.0026 (15)−0.0052 (17)
O30.0308 (17)0.0241 (17)0.0301 (18)0.0034 (14)0.0087 (14)−0.0088 (15)
O20.0413 (18)0.0236 (17)0.0254 (17)−0.0120 (14)−0.0078 (14)0.0033 (14)
O10.0315 (16)0.0210 (16)0.0350 (18)−0.0103 (13)−0.0128 (14)−0.0013 (14)
O60.0233 (16)0.0293 (18)0.067 (2)−0.0096 (14)−0.0204 (17)−0.0045 (17)
O50.0235 (16)0.0238 (18)0.060 (2)−0.0008 (13)−0.0140 (16)−0.0062 (16)
O40.0156 (14)0.0305 (18)0.071 (2)−0.0068 (13)−0.0128 (16)−0.0040 (17)
Pb0.01918 (9)0.02098 (10)0.02834 (11)−0.00717 (6)−0.00471 (7)−0.00173 (7)
C1—N11.328 (6)C18—H180.9300
C1—C21.394 (7)C17—C161.383 (8)
C1—H10.9300C17—H170.9300
C2—C31.357 (6)C26—C251.388 (6)
C2—H20.9300C26—C241.388 (5)
C3—C41.403 (6)C26—C271.508 (5)
C3—H30.9300C24—C231.382 (6)
C4—C121.412 (6)C24—H240.9300
C4—C51.421 (6)C23—C221.379 (6)
C5—N41.371 (5)C23—C281.497 (5)
C5—C61.380 (6)C22—C211.393 (5)
C6—N31.377 (5)C22—H220.9300
C6—C71.416 (6)C21—C251.386 (5)
C7—C81.404 (6)C21—C201.502 (6)
C7—C111.416 (5)C25—H250.9300
C8—C91.359 (6)C27—O21.239 (5)
C8—H80.9300C27—O31.262 (5)
C9—C101.386 (6)C28—O51.196 (5)
C9—H90.9300C28—O41.327 (5)
C10—N21.324 (5)C20—O61.253 (5)
C10—H100.9300C20—O11.269 (5)
C11—N21.356 (5)C16—C151.380 (7)
C11—C121.463 (6)C16—H160.9300
C12—N11.350 (5)C15—H150.9300
C13—N31.330 (6)Pb—N12.561 (4)
C13—N41.374 (5)Pb—N22.449 (3)
C13—C141.462 (6)Pb—O1i2.342 (3)
C14—C151.387 (6)Pb—O32.530 (3)
C14—C191.394 (6)Pb—O6i2.903 (3)
C19—C181.376 (6)O4—H4A0.8200
C19—H190.9300N4—H40.8600
C18—C171.379 (8)
N1—C1—C2123.1 (4)C23—C24—C26120.5 (4)
N1—C1—H1118.5C23—C24—H24119.8
C2—C1—H1118.5C26—C24—H24119.8
C3—C2—C1119.1 (4)C22—C23—C24119.3 (4)
C3—C2—H2120.4C22—C23—C28117.9 (4)
C1—C2—H2120.4C24—C23—C28122.8 (4)
C2—C3—C4119.6 (4)C23—C22—C21121.0 (4)
C2—C3—H3120.2C23—C22—H22119.5
C4—C3—H3120.2C21—C22—H22119.5
C3—C4—C12117.7 (4)C25—C21—C22119.2 (4)
C3—C4—C5125.7 (4)C25—C21—C20122.2 (3)
C12—C4—C5116.5 (4)C22—C21—C20118.6 (4)
N4—C5—C6106.2 (3)C21—C25—C26120.1 (3)
N4—C5—C4131.0 (4)C21—C25—H25119.9
C6—C5—C4122.8 (4)C26—C25—H25119.9
N3—C6—C5110.6 (4)O2—C27—O3123.3 (4)
N3—C6—C7127.5 (4)O2—C27—C26118.9 (4)
C5—C6—C7121.8 (4)O3—C27—C26117.7 (4)
C8—C7—C11118.2 (4)O5—C28—O4123.7 (4)
C8—C7—C6124.0 (4)O5—C28—C23123.3 (4)
C11—C7—C6117.8 (3)O4—C28—C23113.0 (4)
C9—C8—C7118.9 (4)O6—C20—O1122.8 (4)
C9—C8—H8120.6O6—C20—C21119.3 (4)
C7—C8—H8120.6O1—C20—C21117.8 (3)
C8—C9—C10120.1 (4)C17—C16—C15120.1 (5)
C8—C9—H9119.9C17—C16—H16120.0
C10—C9—H9119.9C15—C16—H16120.0
N2—C10—C9122.6 (4)C16—C15—C14120.0 (5)
N2—C10—H10118.7C16—C15—H15120.0
C9—C10—H10118.7C14—C15—H15120.0
N2—C11—C7121.1 (3)C1—N1—C12118.4 (4)
N2—C11—C12119.2 (3)C1—N1—Pb123.8 (3)
C7—C11—C12119.7 (4)C12—N1—Pb117.3 (3)
N1—C12—C4122.0 (4)C10—N2—C11119.1 (3)
N1—C12—C11116.8 (4)C10—N2—Pb120.9 (3)
C4—C12—C11121.2 (3)C11—N2—Pb119.9 (2)
N3—C13—N4112.4 (4)C5—N4—C13106.3 (3)
N3—C13—C14123.3 (4)C5—N4—H4126.9
N4—C13—C14124.3 (4)C13—N4—H4126.9
C15—C14—C19119.8 (4)C13—N3—C6104.5 (3)
C15—C14—C13118.3 (4)C27—O3—Pb130.6 (3)
C19—C14—C13121.9 (4)C20—O1—Pbi107.3 (2)
C18—C19—C14119.5 (5)C28—O4—H4A109.5
C18—C19—H19120.3O1i—Pb—N275.71 (10)
C14—C19—H19120.3O1i—Pb—O386.66 (11)
C19—C18—C17120.8 (5)N2—Pb—O379.48 (10)
C19—C18—H18119.6O1i—Pb—N178.54 (11)
C17—C18—H18119.6N2—Pb—N166.07 (10)
C18—C17—C16119.8 (5)O3—Pb—N1144.85 (10)
C18—C17—H17120.1O6i—Pb—N179.58 (10)
C16—C17—H17120.1O6i—Pb—N2119.29 (10)
C25—C26—C24119.8 (4)O6i—Pb—O1i48.50 (10)
C25—C26—C27121.0 (3)O6i—Pb—O3113.57 (10)
C24—C26—C27119.3 (4)
D—H···AD—HH···AD···AD—H···A
N4—H4···O2ii0.861.972.815 (5)169
O4—H4A···O6iii0.821.832.653 (4)177
Table 1

Selected bond lengths (Å)

Pb—N12.561 (4)
Pb—N22.449 (3)
Pb—O1i2.342 (3)
Pb—O32.530 (3)
Pb—O6i2.903 (3)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4⋯O2ii0.861.972.815 (5)169
O4—H4A⋯O6iii0.821.832.653 (4)177

Symmetry codes: (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Phenyl-1H-1,3,7,8-tetra-azacyclo-penta-[l]phenanthrene.

Authors:  Dong-Ming Liu; Xiu-Ying Li; Xiang-Cheng Wang; Chun-Xiang Li; Chun-Bo Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20
  2 in total

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