| Literature DB >> 21589272 |
Yun-Liang Zhang1, Ti-Lou Liu, Shuang-Jiao Sun, Jie-Hong Li, Shi-Qing Wu.
Abstract
In the centrosymmetric title compound, [Co(C(7)H(4)NO(4))(2)(C(12)H(9)N(5))(2)(H(2)O)(2)]·2H(2)O, the Co(II) atom, located on an inversion center, is coordinated by two N atoms [Co-N = 2.155 (3) Å] and four O atoms [Co-O = 2.099 (2)-2.117 (3) Å] in a distorted octa-hedral geometry. Inter-molecular N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds link the components into a three-dimensional supramolecular framework.Entities:
Year: 2010 PMID: 21589272 PMCID: PMC3011517 DOI: 10.1107/S1600536810046374
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C7H4NO4)2(C12H9N5)2(H2O)2]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2567 reflections | |
| θ = 1.5–25.0° | |
| µ = 0.51 mm−1 | |
| α = 81.97 (3)° | |
| β = 85.74 (3)° | Block, red |
| γ = 71.36 (3)° | 0.40 × 0.20 × 0.12 mm |
| Bruker SMART CCD area-detector diffractometer | 3518 independent reflections |
| Radiation source: fine-focus sealed tube | 2642 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 5815 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3518 reflections | (Δ/σ)max < 0.001 |
| 306 parameters | Δρmax = 0.43 e Å−3 |
| 7 restraints | Δρmin = −0.68 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 1.0000 | 0.5000 | 0.5000 | 0.0338 (2) | |
| C1 | 0.8882 (5) | 0.5642 (5) | 0.2676 (3) | 0.0402 (10) | |
| C2 | 0.8606 (4) | 0.5027 (4) | 0.1685 (3) | 0.0381 (9) | |
| C3 | 0.9466 (5) | 0.3630 (5) | 0.1493 (3) | 0.0559 (11) | |
| H3A | 1.0224 | 0.3042 | 0.1985 | 0.067* | |
| C4 | 0.9203 (6) | 0.3103 (5) | 0.0571 (4) | 0.0649 (13) | |
| H4A | 0.9803 | 0.2171 | 0.0440 | 0.078* | |
| C5 | 0.8061 (6) | 0.3954 (5) | −0.0147 (3) | 0.0567 (12) | |
| H5 | 0.7877 | 0.3608 | −0.0765 | 0.068* | |
| C6 | 0.7193 (5) | 0.5333 (5) | 0.0068 (3) | 0.0429 (10) | |
| C7 | 0.7445 (4) | 0.5889 (4) | 0.0965 (3) | 0.0397 (9) | |
| H7A | 0.6849 | 0.6826 | 0.1087 | 0.048* | |
| C8 | 0.7649 (4) | 0.3339 (4) | 0.4794 (3) | 0.0364 (9) | |
| H8A | 0.8321 | 0.3094 | 0.4190 | 0.044* | |
| C9 | 0.6321 (4) | 0.2837 (4) | 0.4974 (3) | 0.0328 (8) | |
| C10 | 0.5367 (4) | 0.3156 (4) | 0.5896 (3) | 0.0382 (9) | |
| H10A | 0.4482 | 0.2822 | 0.6056 | 0.046* | |
| C11 | 0.5751 (4) | 0.3979 (4) | 0.6575 (3) | 0.0426 (10) | |
| H11A | 0.5120 | 0.4214 | 0.7197 | 0.051* | |
| C12 | 0.7069 (4) | 0.4449 (4) | 0.6328 (3) | 0.0372 (9) | |
| H12A | 0.7319 | 0.4998 | 0.6797 | 0.045* | |
| C13 | 0.6008 (4) | 0.1986 (4) | 0.4186 (3) | 0.0352 (9) | |
| C14 | 0.4831 (4) | 0.0989 (4) | 0.3271 (3) | 0.0361 (9) | |
| C15 | 0.3665 (4) | 0.0439 (4) | 0.2817 (3) | 0.0371 (9) | |
| C16 | 0.2248 (4) | 0.0407 (4) | 0.3380 (3) | 0.0424 (10) | |
| H16A | 0.2023 | 0.0715 | 0.4062 | 0.051* | |
| C17 | 0.1174 (5) | −0.0086 (5) | 0.2919 (3) | 0.0524 (11) | |
| H17A | 0.0236 | −0.0114 | 0.3316 | 0.063* | |
| C18 | 0.2767 (5) | −0.0503 (5) | 0.1408 (3) | 0.0558 (12) | |
| H18A | 0.2958 | −0.0813 | 0.0726 | 0.067* | |
| C19 | 0.3924 (5) | −0.0047 (5) | 0.1808 (3) | 0.0483 (11) | |
| H19A | 0.4871 | −0.0063 | 0.1405 | 0.058* | |
| N1 | 0.8013 (3) | 0.4154 (3) | 0.5443 (2) | 0.0338 (7) | |
| N2 | 0.4570 (3) | 0.1725 (3) | 0.4117 (2) | 0.0357 (7) | |
| N3 | 0.7120 (3) | 0.1453 (4) | 0.3446 (2) | 0.0440 (8) | |
| N4 | 0.6339 (4) | 0.0816 (4) | 0.2875 (3) | 0.0431 (8) | |
| N5 | 0.1390 (4) | −0.0527 (4) | 0.1940 (3) | 0.0526 (9) | |
| N6 | 0.5966 (5) | 0.6266 (5) | −0.0687 (3) | 0.0576 (10) | |
| O1 | 0.9798 (3) | 0.4763 (3) | 0.33767 (19) | 0.0411 (7) | |
| O2 | 0.8182 (4) | 0.6953 (3) | 0.2740 (2) | 0.0514 (7) | |
| O3 | 0.5106 (4) | 0.7427 (4) | −0.0446 (3) | 0.0811 (11) | |
| O4 | 0.5802 (4) | 0.5808 (5) | −0.1515 (3) | 0.0949 (13) | |
| O5 | 1.1510 (3) | 0.2825 (3) | 0.5207 (2) | 0.0410 (7) | |
| O6 | 0.1644 (3) | 0.0713 (3) | 0.8675 (2) | 0.0491 (7) | |
| H5A | 1.237 (3) | 0.253 (4) | 0.484 (3) | 0.062 (14)* | |
| H4 | 0.687 (4) | 0.042 (4) | 0.234 (2) | 0.046 (11)* | |
| H6A | 0.073 (4) | 0.061 (5) | 0.861 (4) | 0.098 (19)* | |
| H5B | 1.177 (6) | 0.285 (7) | 0.586 (2) | 0.13 (3)* | |
| H6B | 0.164 (5) | 0.155 (3) | 0.839 (4) | 0.084 (18)* |
| Co1 | 0.0306 (4) | 0.0402 (5) | 0.0342 (4) | −0.0127 (3) | 0.0013 (3) | −0.0139 (3) |
| C1 | 0.046 (2) | 0.054 (3) | 0.030 (2) | −0.027 (2) | 0.0032 (18) | −0.009 (2) |
| C2 | 0.041 (2) | 0.044 (3) | 0.0316 (19) | −0.016 (2) | 0.0003 (17) | −0.0089 (18) |
| C3 | 0.062 (3) | 0.055 (3) | 0.045 (2) | −0.009 (3) | −0.011 (2) | −0.009 (2) |
| C4 | 0.079 (3) | 0.048 (3) | 0.063 (3) | −0.004 (3) | −0.002 (3) | −0.030 (2) |
| C5 | 0.070 (3) | 0.061 (3) | 0.043 (2) | −0.018 (3) | −0.005 (2) | −0.020 (2) |
| C6 | 0.049 (2) | 0.052 (3) | 0.032 (2) | −0.020 (2) | −0.0007 (18) | −0.0097 (19) |
| C7 | 0.044 (2) | 0.041 (3) | 0.037 (2) | −0.015 (2) | 0.0036 (18) | −0.0104 (18) |
| C8 | 0.0296 (18) | 0.042 (3) | 0.037 (2) | −0.0077 (18) | 0.0020 (16) | −0.0117 (18) |
| C9 | 0.0306 (18) | 0.030 (2) | 0.0369 (19) | −0.0078 (17) | −0.0032 (16) | −0.0058 (16) |
| C10 | 0.0325 (19) | 0.045 (3) | 0.040 (2) | −0.0159 (19) | 0.0000 (16) | −0.0075 (18) |
| C11 | 0.037 (2) | 0.054 (3) | 0.039 (2) | −0.015 (2) | 0.0055 (17) | −0.0135 (19) |
| C12 | 0.0339 (19) | 0.042 (3) | 0.037 (2) | −0.0103 (19) | −0.0002 (16) | −0.0146 (18) |
| C13 | 0.0309 (18) | 0.036 (2) | 0.041 (2) | −0.0124 (18) | 0.0007 (16) | −0.0115 (17) |
| C14 | 0.0349 (19) | 0.033 (2) | 0.043 (2) | −0.0107 (18) | 0.0012 (17) | −0.0117 (18) |
| C15 | 0.0341 (19) | 0.035 (2) | 0.042 (2) | −0.0078 (18) | −0.0064 (17) | −0.0082 (17) |
| C16 | 0.039 (2) | 0.040 (3) | 0.049 (2) | −0.0102 (19) | 0.0005 (18) | −0.0144 (19) |
| C17 | 0.035 (2) | 0.055 (3) | 0.069 (3) | −0.013 (2) | −0.001 (2) | −0.018 (2) |
| C18 | 0.059 (3) | 0.062 (3) | 0.054 (3) | −0.024 (3) | −0.002 (2) | −0.021 (2) |
| C19 | 0.045 (2) | 0.061 (3) | 0.048 (2) | −0.024 (2) | 0.0039 (19) | −0.020 (2) |
| N1 | 0.0301 (15) | 0.037 (2) | 0.0351 (16) | −0.0090 (14) | −0.0009 (13) | −0.0116 (14) |
| N2 | 0.0330 (15) | 0.039 (2) | 0.0385 (17) | −0.0128 (15) | 0.0000 (13) | −0.0122 (14) |
| N3 | 0.0365 (17) | 0.054 (2) | 0.0498 (19) | −0.0192 (17) | 0.0049 (15) | −0.0240 (17) |
| N4 | 0.0352 (17) | 0.054 (2) | 0.0458 (19) | −0.0159 (17) | 0.0052 (16) | −0.0251 (17) |
| N5 | 0.0453 (19) | 0.056 (3) | 0.063 (2) | −0.0192 (19) | −0.0048 (18) | −0.0200 (19) |
| N6 | 0.066 (2) | 0.071 (3) | 0.039 (2) | −0.021 (2) | −0.0080 (18) | −0.011 (2) |
| O1 | 0.0430 (14) | 0.0474 (19) | 0.0355 (14) | −0.0159 (14) | −0.0033 (12) | −0.0087 (13) |
| O2 | 0.0730 (19) | 0.042 (2) | 0.0392 (15) | −0.0145 (17) | −0.0036 (14) | −0.0128 (13) |
| O3 | 0.095 (3) | 0.073 (3) | 0.065 (2) | −0.002 (2) | −0.0267 (19) | −0.0183 (19) |
| O4 | 0.102 (3) | 0.118 (4) | 0.056 (2) | −0.006 (3) | −0.0311 (19) | −0.038 (2) |
| O5 | 0.0344 (14) | 0.0447 (19) | 0.0428 (15) | −0.0066 (14) | 0.0028 (13) | −0.0178 (13) |
| O6 | 0.0490 (17) | 0.049 (2) | 0.0525 (17) | −0.0168 (16) | −0.0001 (14) | −0.0135 (15) |
| Co1—O1 | 2.099 (2) | C11—C12 | 1.369 (5) |
| Co1—O1i | 2.099 (2) | C11—H11A | 0.9300 |
| Co1—O5i | 2.117 (3) | C12—N1 | 1.335 (4) |
| Co1—O5 | 2.117 (3) | C12—H12A | 0.9300 |
| Co1—N1i | 2.155 (3) | C13—N3 | 1.321 (4) |
| Co1—N1 | 2.155 (3) | C13—N2 | 1.367 (4) |
| C1—O2 | 1.251 (5) | C14—N2 | 1.329 (4) |
| C1—O1 | 1.266 (5) | C14—N4 | 1.335 (4) |
| C1—C2 | 1.518 (5) | C14—C15 | 1.473 (4) |
| C2—C3 | 1.385 (6) | C15—C16 | 1.381 (5) |
| C2—C7 | 1.387 (5) | C15—C19 | 1.387 (5) |
| C3—C4 | 1.389 (5) | C16—C17 | 1.375 (5) |
| C3—H3A | 0.9300 | C16—H16A | 0.9300 |
| C4—C5 | 1.373 (6) | C17—N5 | 1.335 (5) |
| C4—H4A | 0.9300 | C17—H17A | 0.9300 |
| C5—C6 | 1.379 (6) | C18—N5 | 1.332 (5) |
| C5—H5 | 0.9300 | C18—C19 | 1.376 (5) |
| C6—C7 | 1.374 (5) | C18—H18A | 0.9300 |
| C6—N6 | 1.468 (5) | C19—H19A | 0.9300 |
| C7—H7A | 0.9300 | N3—N4 | 1.354 (4) |
| C8—N1 | 1.335 (4) | N4—H4 | 0.850 (18) |
| C8—C9 | 1.388 (4) | N6—O3 | 1.214 (5) |
| C8—H8A | 0.9300 | N6—O4 | 1.219 (4) |
| C9—C10 | 1.382 (5) | O5—H5A | 0.84 (3) |
| C9—C13 | 1.470 (5) | O5—H5B | 0.87 (3) |
| C10—C11 | 1.376 (5) | O6—H6A | 0.85 (4) |
| C10—H10A | 0.9300 | O6—H6B | 0.85 (3) |
| O1—Co1—O1i | 180.00 | C12—C11—C10 | 119.5 (3) |
| O1—Co1—O5i | 92.14 (11) | C12—C11—H11A | 120.2 |
| O1i—Co1—O5i | 87.86 (11) | C10—C11—H11A | 120.2 |
| O1—Co1—O5 | 87.86 (11) | N1—C12—C11 | 122.9 (3) |
| O1i—Co1—O5 | 92.14 (11) | N1—C12—H12A | 118.6 |
| O5i—Co1—O5 | 180.00 | C11—C12—H12A | 118.6 |
| O1—Co1—N1i | 90.32 (10) | N3—C13—N2 | 114.5 (3) |
| O1i—Co1—N1i | 89.68 (10) | N3—C13—C9 | 121.0 (3) |
| O5i—Co1—N1i | 86.07 (11) | N2—C13—C9 | 124.5 (3) |
| O5—Co1—N1i | 93.93 (11) | N2—C14—N4 | 109.5 (3) |
| O1—Co1—N1 | 89.68 (10) | N2—C14—C15 | 126.5 (3) |
| O1i—Co1—N1 | 90.32 (10) | N4—C14—C15 | 124.0 (3) |
| O5i—Co1—N1 | 93.93 (11) | C16—C15—C19 | 117.3 (3) |
| O5—Co1—N1 | 86.07 (11) | C16—C15—C14 | 120.8 (3) |
| N1i—Co1—N1 | 180.00 | C19—C15—C14 | 121.9 (3) |
| O2—C1—O1 | 125.7 (3) | C17—C16—C15 | 119.1 (3) |
| O2—C1—C2 | 118.0 (4) | C17—C16—H16A | 120.5 |
| O1—C1—C2 | 116.3 (4) | C15—C16—H16A | 120.5 |
| C3—C2—C7 | 119.6 (3) | N5—C17—C16 | 124.3 (4) |
| C3—C2—C1 | 121.7 (4) | N5—C17—H17A | 117.8 |
| C7—C2—C1 | 118.7 (4) | C16—C17—H17A | 117.8 |
| C2—C3—C4 | 120.4 (4) | N5—C18—C19 | 123.9 (4) |
| C2—C3—H3A | 119.8 | N5—C18—H18A | 118.1 |
| C4—C3—H3A | 119.8 | C19—C18—H18A | 118.1 |
| C5—C4—C3 | 120.2 (4) | C18—C19—C15 | 119.4 (3) |
| C5—C4—H4A | 119.9 | C18—C19—H19A | 120.3 |
| C3—C4—H4A | 119.9 | C15—C19—H19A | 120.3 |
| C4—C5—C6 | 118.6 (4) | C8—N1—C12 | 117.4 (3) |
| C4—C5—H5 | 120.7 | C8—N1—Co1 | 119.6 (2) |
| C6—C5—H5 | 120.7 | C12—N1—Co1 | 123.0 (2) |
| C7—C6—C5 | 122.4 (4) | C14—N2—C13 | 102.9 (3) |
| C7—C6—N6 | 117.8 (4) | C13—N3—N4 | 102.2 (3) |
| C5—C6—N6 | 119.8 (4) | C14—N4—N3 | 110.9 (3) |
| C6—C7—C2 | 118.7 (4) | C14—N4—H4 | 133 (2) |
| C6—C7—H7A | 120.6 | N3—N4—H4 | 116 (2) |
| C2—C7—H7A | 120.6 | C18—N5—C17 | 116.0 (3) |
| N1—C8—C9 | 123.5 (3) | O3—N6—O4 | 122.5 (4) |
| N1—C8—H8A | 118.3 | O3—N6—C6 | 119.4 (3) |
| C9—C8—H8A | 118.3 | O4—N6—C6 | 118.1 (4) |
| C10—C9—C8 | 117.8 (3) | C1—O1—Co1 | 128.0 (2) |
| C10—C9—C13 | 123.3 (3) | Co1—O5—H5A | 123 (3) |
| C8—C9—C13 | 118.8 (3) | Co1—O5—H5B | 95 (4) |
| C11—C10—C9 | 118.8 (3) | H5A—O5—H5B | 108 (3) |
| C11—C10—H10A | 120.6 | H6A—O6—H6B | 110 (3) |
| C9—C10—H10A | 120.6 | ||
| O2—C1—C2—C3 | 172.9 (3) | C9—C8—N1—C12 | 2.4 (5) |
| O1—C1—C2—C3 | −7.8 (5) | C9—C8—N1—Co1 | −175.1 (3) |
| O2—C1—C2—C7 | −8.0 (5) | C11—C12—N1—C8 | −1.3 (6) |
| O1—C1—C2—C7 | 171.3 (3) | C11—C12—N1—Co1 | 176.1 (3) |
| C7—C2—C3—C4 | 1.7 (6) | O1—Co1—N1—C8 | 22.1 (3) |
| C1—C2—C3—C4 | −179.1 (3) | O1i—Co1—N1—C8 | −157.9 (3) |
| C2—C3—C4—C5 | −1.4 (7) | O5i—Co1—N1—C8 | 114.2 (3) |
| C3—C4—C5—C6 | 0.2 (7) | O5—Co1—N1—C8 | −65.8 (3) |
| C4—C5—C6—C7 | 0.8 (6) | O1—Co1—N1—C12 | −155.3 (3) |
| C4—C5—C6—N6 | 179.9 (4) | O1i—Co1—N1—C12 | 24.7 (3) |
| C5—C6—C7—C2 | −0.5 (5) | O5i—Co1—N1—C12 | −63.2 (3) |
| N6—C6—C7—C2 | −179.7 (3) | O5—Co1—N1—C12 | 116.8 (3) |
| C3—C2—C7—C6 | −0.7 (5) | N4—C14—N2—C13 | 0.6 (4) |
| C1—C2—C7—C6 | −179.9 (3) | C15—C14—N2—C13 | −179.1 (4) |
| N1—C8—C9—C10 | −2.6 (6) | N3—C13—N2—C14 | −0.4 (4) |
| N1—C8—C9—C13 | 178.0 (3) | C9—C13—N2—C14 | 177.1 (4) |
| C8—C9—C10—C11 | 1.5 (6) | N2—C13—N3—N4 | 0.0 (4) |
| C13—C9—C10—C11 | −179.1 (4) | C9—C13—N3—N4 | −177.6 (3) |
| C9—C10—C11—C12 | −0.6 (6) | N2—C14—N4—N3 | −0.7 (5) |
| C10—C11—C12—N1 | 0.5 (6) | C15—C14—N4—N3 | 179.1 (3) |
| C10—C9—C13—N3 | −165.6 (4) | C13—N3—N4—C14 | 0.4 (4) |
| C8—C9—C13—N3 | 13.7 (6) | C19—C18—N5—C17 | −0.6 (7) |
| C10—C9—C13—N2 | 17.1 (6) | C16—C17—N5—C18 | 1.5 (7) |
| C8—C9—C13—N2 | −163.6 (4) | C7—C6—N6—O3 | −7.5 (5) |
| N2—C14—C15—C16 | −12.9 (6) | C5—C6—N6—O3 | 173.4 (4) |
| N4—C14—C15—C16 | 167.4 (4) | C7—C6—N6—O4 | 175.9 (4) |
| N2—C14—C15—C19 | 166.2 (4) | C5—C6—N6—O4 | −3.3 (5) |
| N4—C14—C15—C19 | −13.6 (6) | O2—C1—O1—Co1 | 17.2 (5) |
| C19—C15—C16—C17 | −0.4 (6) | C2—C1—O1—Co1 | −162.0 (2) |
| C14—C15—C16—C17 | 178.7 (4) | O5i—Co1—O1—C1 | −7.9 (3) |
| C15—C16—C17—N5 | −1.0 (7) | O5—Co1—O1—C1 | 172.1 (3) |
| N5—C18—C19—C15 | −0.8 (7) | N1i—Co1—O1—C1 | −94.0 (3) |
| C16—C15—C19—C18 | 1.3 (6) | N1—Co1—O1—C1 | 86.0 (3) |
| C14—C15—C19—C18 | −177.8 (4) |
| H··· | ||||
| N4—H4···O6ii | 0.85 (3) | 1.94 (3) | 2.778 (5) | 169 (3) |
| O5—H5A···N2iii | 0.84 (3) | 2.02 (3) | 2.856 (4) | 174 (4) |
| O5—H5B···O2i | 0.87 (3) | 1.79 (3) | 2.644 (4) | 167 (5) |
| O6—H6A···N5iv | 0.85 (4) | 2.05 (4) | 2.873 (5) | 166 (3) |
| O6—H6B···O2v | 0.85 (3) | 1.93 (4) | 2.735 (4) | 158 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4⋯O6i | 0.85 (3) | 1.94 (3) | 2.778 (5) | 169 (3) |
| O5—H5 | 0.84 (3) | 2.02 (3) | 2.856 (4) | 174 (4) |
| O5—H5 | 0.87 (3) | 1.79 (3) | 2.644 (4) | 167 (5) |
| O6—H6 | 0.85 (4) | 2.05 (4) | 2.873 (5) | 166 (3) |
| O6—H6 | 0.85 (3) | 1.93 (4) | 2.735 (4) | 158 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .