Literature DB >> 21589179

3-[(E)-3-(2,4-Dichloro-phen-yl)prop-2-en-oyl]-4-hy-droxy-2H-chromen-2-one.

Mohammad Asad, Chuan-Wei Oo, Hasnah Osman, Ching Kheng Quah, Hoong-Kun Fun.   

Abstract

In the title compound, C(18)H(10)Cl(2)O(4), the chromen-2-one ring system is almost planar [maximum deviation = 0.028 (1) Å] and is inclined at an angle of 16.35 (4)° with respect to the benzene ring. The C=C bond has an E configuration. The mol-ecular conformation is stabilized by an almost symmetric intra-molecular O⋯H⋯O hydrogen bond and a C-H⋯O inter-action, both of which form S(6) ring motifs. In the crystal structure, mol-ecules are linked into sheets lying parallel to (100) via inter-molecular C-H⋯O hydrogen bonds. The crystal packing is further consolidated by π-π stacking inter-actions [centroid-to-centroid separation = 3.6615 (6) Å].

Entities:  

Year:  2010        PMID: 21589179      PMCID: PMC3009251          DOI: 10.1107/S1600536810043837

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and the biological activity of chalcones, see: Claisen et al. (1881 ▶); Siddiqui et al. (2008 ▶); Harborne & Mabry (1982 ▶); Bandgar et al. (2010 ▶). For related structures, see: Arshad et al. (2010 ▶); Asad et al. (2010 ▶). For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C18H10Cl2O4 M = 361.16 Monoclinic, a = 4.5233 (2) Å b = 21.2099 (9) Å c = 15.6304 (7) Å β = 91.607 (1)° V = 1498.97 (11) Å3 Z = 4 Mo Kα radiation μ = 0.45 mm−1 T = 100 K 0.35 × 0.15 × 0.09 mm

Data collection

Bruker SMART APEXII DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.857, T max = 0.959 25117 measured reflections 6698 independent reflections 5270 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.101 S = 1.05 6698 reflections 222 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810043837/hb5700sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043837/hb5700Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H10Cl2O4F(000) = 736
Mr = 361.16Dx = 1.600 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9100 reflections
a = 4.5233 (2) Åθ = 2.3–35.1°
b = 21.2099 (9) ŵ = 0.45 mm1
c = 15.6304 (7) ÅT = 100 K
β = 91.607 (1)°Needle, yellow
V = 1498.97 (11) Å30.35 × 0.15 × 0.09 mm
Z = 4
Bruker SMART APEXII DUO CCD diffractometer6698 independent reflections
Radiation source: fine-focus sealed tube5270 reflections with I > 2σ(I)
graphiteRint = 0.033
φ and ω scansθmax = 35.3°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −7→7
Tmin = 0.857, Tmax = 0.959k = −27→34
25117 measured reflectionsl = −25→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0509P)2 + 0.2749P] where P = (Fo2 + 2Fc2)/3
6698 reflections(Δ/σ)max = 0.001
222 parametersΔρmax = 0.54 e Å3
0 restraintsΔρmin = −0.34 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.68600 (6)0.640460 (12)0.153533 (17)0.02236 (7)
Cl2−0.07973 (6)0.434153 (13)0.069793 (16)0.02180 (7)
O10.69790 (16)0.35450 (4)0.57063 (5)0.01808 (14)
O20.37593 (19)0.41872 (4)0.51001 (5)0.02516 (17)
O30.96509 (16)0.28446 (4)0.34161 (5)0.01797 (14)
O40.63677 (16)0.35486 (4)0.26596 (5)0.01701 (14)
C10.5646 (2)0.37989 (5)0.49758 (6)0.01664 (17)
C20.9014 (2)0.30666 (5)0.56843 (6)0.01535 (17)
C31.0072 (2)0.28411 (5)0.64694 (7)0.01883 (18)
H3A0.94020.30090.69780.023*
C41.2149 (2)0.23600 (5)0.64775 (7)0.02067 (19)
H4A1.28890.22070.69980.025*
C51.3149 (2)0.21011 (5)0.57151 (7)0.02046 (19)
H5A1.45440.17790.57310.025*
C61.2059 (2)0.23256 (5)0.49397 (7)0.01786 (18)
H6A1.27080.21530.44310.021*
C70.9967 (2)0.28162 (5)0.49195 (6)0.01467 (16)
C80.87645 (19)0.30746 (4)0.41294 (6)0.01417 (16)
C90.6643 (2)0.35648 (4)0.41544 (6)0.01407 (16)
C100.54393 (19)0.37953 (5)0.33533 (6)0.01447 (16)
C110.3233 (2)0.42963 (5)0.32717 (6)0.01642 (17)
H11A0.27500.45410.37420.020*
C120.1915 (2)0.43961 (5)0.25011 (6)0.01545 (17)
H12A0.24760.41330.20580.019*
C13−0.0299 (2)0.48736 (5)0.22909 (6)0.01444 (16)
C14−0.1625 (2)0.49008 (5)0.14673 (6)0.01522 (16)
C15−0.3651 (2)0.53657 (5)0.12291 (6)0.01714 (17)
H15A−0.44750.53790.06770.021*
C16−0.4410 (2)0.58096 (5)0.18364 (7)0.01636 (17)
C17−0.3254 (2)0.57894 (5)0.26670 (7)0.01765 (17)
H17A−0.38430.60820.30720.021*
C18−0.1210 (2)0.53266 (5)0.28840 (6)0.01714 (17)
H18A−0.04150.53150.34390.021*
H1O0.812 (5)0.3171 (11)0.2882 (15)0.077 (7)*
U11U22U33U12U13U23
Cl10.02114 (11)0.01919 (12)0.02702 (13)0.00611 (8)0.00565 (9)0.00516 (9)
Cl20.02795 (12)0.02120 (13)0.01605 (11)0.00727 (9)−0.00287 (8)−0.00406 (9)
O10.0216 (3)0.0197 (4)0.0130 (3)0.0062 (3)0.0009 (2)0.0002 (3)
O20.0307 (4)0.0272 (4)0.0177 (4)0.0140 (3)0.0026 (3)0.0002 (3)
O30.0201 (3)0.0190 (3)0.0149 (3)0.0025 (3)0.0016 (2)−0.0027 (3)
O40.0179 (3)0.0202 (4)0.0130 (3)0.0002 (2)−0.0004 (2)−0.0016 (3)
C10.0194 (4)0.0166 (4)0.0139 (4)0.0014 (3)0.0001 (3)0.0004 (3)
C20.0154 (4)0.0149 (4)0.0157 (4)0.0007 (3)0.0009 (3)0.0016 (3)
C30.0196 (4)0.0212 (5)0.0157 (4)0.0006 (3)0.0005 (3)0.0030 (4)
C40.0194 (4)0.0220 (5)0.0204 (5)0.0004 (4)−0.0016 (3)0.0068 (4)
C50.0181 (4)0.0179 (5)0.0254 (5)0.0025 (3)0.0000 (3)0.0038 (4)
C60.0169 (4)0.0161 (4)0.0206 (4)0.0007 (3)0.0016 (3)−0.0001 (4)
C70.0150 (4)0.0137 (4)0.0154 (4)−0.0010 (3)0.0009 (3)0.0007 (3)
C80.0140 (4)0.0140 (4)0.0146 (4)−0.0021 (3)0.0009 (3)−0.0007 (3)
C90.0147 (4)0.0150 (4)0.0125 (4)−0.0001 (3)0.0004 (3)0.0002 (3)
C100.0135 (4)0.0147 (4)0.0152 (4)−0.0027 (3)−0.0004 (3)0.0000 (3)
C110.0164 (4)0.0167 (4)0.0161 (4)0.0000 (3)−0.0008 (3)0.0006 (3)
C120.0148 (4)0.0158 (4)0.0156 (4)−0.0012 (3)−0.0005 (3)0.0006 (3)
C130.0146 (4)0.0150 (4)0.0138 (4)−0.0014 (3)0.0004 (3)0.0010 (3)
C140.0165 (4)0.0156 (4)0.0135 (4)0.0001 (3)0.0008 (3)−0.0009 (3)
C150.0173 (4)0.0181 (5)0.0160 (4)0.0013 (3)−0.0001 (3)0.0008 (3)
C160.0148 (4)0.0145 (4)0.0200 (4)0.0007 (3)0.0037 (3)0.0021 (3)
C170.0187 (4)0.0164 (4)0.0179 (4)−0.0005 (3)0.0035 (3)−0.0017 (3)
C180.0179 (4)0.0181 (4)0.0154 (4)−0.0013 (3)0.0004 (3)−0.0012 (3)
Cl1—C161.7358 (10)C6—H6A0.9300
Cl2—C141.7376 (10)C7—C81.4436 (13)
O1—C21.3711 (12)C8—C91.4162 (13)
O1—C11.3851 (12)C9—C101.4371 (13)
O2—C11.2059 (12)C10—C111.4610 (13)
O3—C81.2910 (11)C11—C121.3457 (13)
O3—H1O1.27 (2)C11—H11A0.9300
O4—C101.2851 (12)C12—C131.4554 (13)
O4—H1O1.17 (2)C12—H12A0.9300
C1—C91.4595 (13)C13—C181.4050 (14)
C2—C71.3877 (14)C13—C141.4061 (13)
C2—C31.3895 (14)C14—C151.3896 (13)
C3—C41.3869 (15)C15—C161.3870 (14)
C3—H3A0.9300C15—H15A0.9300
C4—C51.3988 (16)C16—C171.3867 (14)
C4—H4A0.9300C17—C181.3841 (14)
C5—C61.3804 (15)C17—H17A0.9300
C5—H5A0.9300C18—H18A0.9300
C6—C71.4062 (13)
C2—O1—C1122.95 (8)C10—C9—C1122.14 (8)
C8—O3—H1O100.6 (11)O4—C10—C9118.16 (9)
C10—O4—H1O105.2 (12)O4—C10—C11117.46 (8)
O2—C1—O1115.24 (9)C9—C10—C11124.38 (9)
O2—C1—C9127.70 (9)C12—C11—C10118.48 (9)
O1—C1—C9117.06 (8)C12—C11—H11A120.8
O1—C2—C7122.00 (8)C10—C11—H11A120.8
O1—C2—C3116.57 (9)C11—C12—C13126.60 (9)
C7—C2—C3121.43 (9)C11—C12—H12A116.7
C4—C3—C2118.53 (10)C13—C12—H12A116.7
C4—C3—H3A120.7C18—C13—C14116.78 (9)
C2—C3—H3A120.7C18—C13—C12122.66 (8)
C3—C4—C5121.09 (9)C14—C13—C12120.56 (9)
C3—C4—H4A119.5C15—C14—C13122.39 (9)
C5—C4—H4A119.5C15—C14—Cl2116.89 (7)
C6—C5—C4119.76 (9)C13—C14—Cl2120.72 (7)
C6—C5—H5A120.1C16—C15—C14118.18 (9)
C4—C5—H5A120.1C16—C15—H15A120.9
C5—C6—C7119.91 (9)C14—C15—H15A120.9
C5—C6—H6A120.0C17—C16—C15121.71 (9)
C7—C6—H6A120.0C17—C16—Cl1119.83 (8)
C2—C7—C6119.27 (9)C15—C16—Cl1118.46 (8)
C2—C7—C8118.22 (8)C18—C17—C16118.89 (9)
C6—C7—C8122.51 (9)C18—C17—H17A120.6
O3—C8—C9121.89 (9)C16—C17—H17A120.6
O3—C8—C7118.46 (8)C17—C18—C13121.97 (9)
C9—C8—C7119.64 (8)C17—C18—H18A119.0
C8—C9—C10117.78 (8)C13—C18—H18A119.0
C8—C9—C1120.01 (8)
C2—O1—C1—O2175.23 (9)O2—C1—C9—C101.19 (16)
C2—O1—C1—C9−4.08 (14)O1—C1—C9—C10−179.59 (8)
C1—O1—C2—C72.35 (14)C8—C9—C10—O4−0.56 (13)
C1—O1—C2—C3−177.35 (9)C1—C9—C10—O4−177.65 (9)
O1—C2—C3—C4−179.58 (9)C8—C9—C10—C11179.82 (9)
C7—C2—C3—C40.72 (15)C1—C9—C10—C112.74 (14)
C2—C3—C4—C5−0.55 (16)O4—C10—C11—C1211.55 (13)
C3—C4—C5—C6−0.03 (16)C9—C10—C11—C12−168.83 (9)
C4—C5—C6—C70.47 (15)C10—C11—C12—C13−179.31 (9)
O1—C2—C7—C6−179.98 (9)C11—C12—C13—C184.13 (15)
C3—C2—C7—C6−0.30 (15)C11—C12—C13—C14−176.17 (9)
O1—C2—C7—C80.23 (14)C18—C13—C14—C152.61 (14)
C3—C2—C7—C8179.92 (9)C12—C13—C14—C15−177.10 (9)
C5—C6—C7—C2−0.31 (14)C18—C13—C14—Cl2−176.94 (7)
C5—C6—C7—C8179.47 (9)C12—C13—C14—Cl23.35 (13)
C2—C7—C8—O3179.79 (9)C13—C14—C15—C16−1.12 (14)
C6—C7—C8—O30.01 (14)Cl2—C14—C15—C16178.44 (7)
C2—C7—C8—C9−0.80 (13)C14—C15—C16—C17−1.44 (14)
C6—C7—C8—C9179.43 (9)C14—C15—C16—Cl1178.24 (7)
O3—C8—C9—C101.20 (13)C15—C16—C17—C182.35 (15)
C7—C8—C9—C10−178.19 (8)Cl1—C16—C17—C18−177.32 (8)
O3—C8—C9—C1178.35 (9)C16—C17—C18—C13−0.73 (15)
C7—C8—C9—C1−1.04 (13)C14—C13—C18—C17−1.66 (14)
O2—C1—C9—C8−175.83 (10)C12—C13—C18—C17178.05 (9)
O1—C1—C9—C83.39 (13)
D—H···AD—HH···AD···AD—H···A
O3—H1O···O41.27 (2)1.17 (2)2.3947 (11)156 (2)
C11—H11A···O20.932.292.8704 (12)120
C4—H4A···O4i0.932.453.2514 (13)144
C17—H17A···O1ii0.932.543.3966 (13)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H1O⋯O41.27 (2)1.17 (2)2.3947 (11)156 (2)
C11—H11A⋯O20.932.292.8704 (12)120
C4—H4A⋯O4i0.932.453.2514 (13)144
C17—H17A⋯O1ii0.932.543.3966 (13)154

Symmetry codes: (i) ; (ii) .

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2.  4-[(E)-(4-Hy-droxy-2-oxo-2H-chromen-3-yl)methyl-idene-amino]-1,5-dimethyl-2-phenyl-1H-pyrazol-3(2H)-one monohydrate.

Authors:  Mohammad Asad; Chuan-Wei Oo; Hasnah Osman; Ching Kheng Quah; Hoong-Kun Fun
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Journal:  Bioorg Med Chem       Date:  2009-12-06       Impact factor: 3.641

4.  3-{2-[2-(2-Fluoro-benzyl-idene)hydrazin-yl]-1,3-thia-zol-4-yl}-2H-chromen-2-one.

Authors:  Afsheen Arshad; Hasnah Osman; Chan Kit Lam; Ching Kheng Quah; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-26

5.  Structure validation in chemical crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  3-[5-(2,4-Dichloro-phen-yl)-1-phenyl-4,5-dihydro-1H-pyrazol-3-yl]-4-hy-droxy-2H-chromen-2-one.

Authors:  Mohammad Asad; Chuan-Wei Oo; Hasnah Osman; Mohd Mustaqim Rosli; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22

2.  4-Hy-droxy-3-[(E)-3-phenyl-prop-2-eno-yl]-2H-chromen-2-one.

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