Literature DB >> 21589165

N'-(3-Hy-droxy-benzyl-idene)-4-nitro-benzohydrazide.

Chun-Hua Dai1, Fu-Lin Mao.   

Abstract

The title mol-ecule, C(14)H(11)N(3)O(4), is approximately planar, with an inter-planar angle between the two benzene rings of 5.8 (2)°. In the crystal, four mol-ecules are linked by an R(4) (4)(12) motif with pairs of strong O-H⋯O and N-H⋯O hydrogen bonds. The motif is situated about the crystallographic centres of symmetry and it is composed of two pairs of parallel mol-ecules. This quadruplet of mol-ecules is further extended by symmetry-equivalent hydrogen bonds to form layers parallel to the (10) plane. In addition to the hydrogen bonds, there is also a weak π-π inter-action between the benzene rings.

Entities:  

Year:  2010        PMID: 21589165      PMCID: PMC3009013          DOI: 10.1107/S1600536810043564

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For medical applications of hydrazones, see: Ajani et al. (2010 ▶); Angelusiu et al. (2010 ▶); Zhang et al. (2010 ▶). For related structures, see: Ahmad et al. (2010 ▶); Huang & Wu (2010 ▶); Ji & Lu (2010 ▶); Khaledi et al. (2010 ▶); Singh & Singh (2010 ▶); Zhou & Yang (2010 ▶). For background to hydrogen bonds, see: Desiraju & Steiner (1999 ▶). For hydrogen-bonding motifs, see: Etter et al. (1990 ▶). PLATON (Spek, 2009 ▶) was used to analyse the π–π inter­actions.

Experimental

Crystal data

C14H11N3O4 M = 285.26 Monoclinic, a = 9.987 (3) Å b = 8.967 (3) Å c = 15.108 (4) Å β = 106.560 (3)° V = 1296.8 (6) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.13 × 0.10 × 0.10 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.986, T max = 0.989 6579 measured reflections 2768 independent reflections 1787 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.119 S = 1.03 2768 reflections 197 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810043564/fb2226sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043564/fb2226Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11N3O4F(000) = 592
Mr = 285.26Dx = 1.461 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1436 reflections
a = 9.987 (3) Åθ = 2.7–26.3°
b = 8.967 (3) ŵ = 0.11 mm1
c = 15.108 (4) ÅT = 298 K
β = 106.560 (3)°Block, yellow
V = 1296.8 (6) Å30.13 × 0.10 × 0.10 mm
Z = 4
Bruker SMART 1000 CCD diffractometer2768 independent reflections
Radiation source: fine-focus sealed tube1787 reflections with I > 2σ(I)
graphiteRint = 0.028
ω scansθmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −11→12
Tmin = 0.986, Tmax = 0.989k = −11→10
6579 measured reflectionsl = −18→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0537P)2 + 0.0632P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2768 reflectionsΔρmax = 0.21 e Å3
197 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
38 constraintsExtinction coefficient: 0.0088 (17)
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.00619 (14)0.30350 (16)0.94081 (9)0.0406 (4)
N20.12358 (14)0.36267 (16)1.00310 (10)0.0398 (4)
N30.69398 (17)0.6801 (2)1.24192 (14)0.0589 (5)
O1−0.42069 (13)0.13866 (16)0.68671 (8)0.0555 (4)
H1−0.493 (2)0.089 (2)0.6608 (16)0.083*
O20.16825 (12)0.52109 (15)0.89819 (8)0.0533 (4)
O30.76141 (18)0.7733 (2)1.21577 (13)0.0993 (6)
O40.72752 (16)0.62850 (19)1.31937 (12)0.0842 (6)
C1−0.18157 (16)0.12789 (18)0.91821 (11)0.0359 (4)
C2−0.24225 (16)0.16628 (19)0.82649 (11)0.0372 (4)
H2A−0.20250.24050.79920.045*
C3−0.36203 (17)0.0939 (2)0.77569 (11)0.0385 (4)
C4−0.42103 (19)−0.0178 (2)0.81556 (13)0.0452 (5)
H4−0.5005−0.06750.78100.054*
C5−0.3613 (2)−0.0546 (2)0.90643 (14)0.0502 (5)
H5−0.4015−0.12900.93340.060*
C6−0.24222 (18)0.0171 (2)0.95848 (13)0.0449 (5)
H6−0.2029−0.00861.02010.054*
C7−0.05675 (17)0.20413 (19)0.97439 (12)0.0393 (4)
H7−0.02220.17941.03650.047*
C80.19947 (16)0.4687 (2)0.97659 (12)0.0369 (4)
C90.32783 (16)0.52089 (18)1.04872 (11)0.0341 (4)
C100.39976 (17)0.64059 (19)1.02656 (12)0.0400 (4)
H100.36760.68550.96890.048*
C110.51947 (18)0.6937 (2)1.09002 (13)0.0438 (5)
H110.56810.77421.07560.053*
C120.56488 (16)0.62500 (19)1.17461 (12)0.0410 (5)
C130.49633 (17)0.50675 (19)1.19882 (12)0.0437 (5)
H130.52920.46241.25660.052*
C140.37696 (16)0.45478 (19)1.13512 (11)0.0407 (5)
H140.32890.37451.15030.049*
H20.1392 (19)0.341 (2)1.0640 (14)0.061*
U11U22U33U12U13U23
N10.0314 (7)0.0502 (9)0.0331 (8)0.0010 (7)−0.0021 (6)−0.0075 (7)
N20.0340 (7)0.0487 (9)0.0295 (8)−0.0019 (7)−0.0027 (6)−0.0017 (7)
N30.0419 (9)0.0546 (11)0.0707 (13)−0.0056 (8)0.0008 (9)−0.0167 (10)
O10.0436 (8)0.0827 (11)0.0308 (7)−0.0161 (7)−0.0046 (6)0.0000 (7)
O20.0411 (7)0.0761 (10)0.0353 (8)0.0012 (6)−0.0006 (6)0.0098 (7)
O30.0719 (11)0.1000 (14)0.1113 (15)−0.0481 (10)0.0023 (10)−0.0048 (11)
O40.0703 (10)0.0935 (13)0.0634 (11)−0.0126 (9)−0.0219 (8)−0.0066 (10)
C10.0327 (9)0.0371 (10)0.0347 (10)0.0047 (7)0.0042 (7)−0.0060 (8)
C20.0333 (9)0.0449 (10)0.0321 (10)−0.0018 (7)0.0074 (7)−0.0039 (8)
C30.0331 (9)0.0494 (11)0.0302 (10)−0.0001 (8)0.0047 (7)−0.0067 (8)
C40.0407 (10)0.0486 (11)0.0429 (11)−0.0097 (8)0.0064 (8)−0.0084 (9)
C50.0558 (12)0.0425 (11)0.0509 (12)−0.0084 (9)0.0127 (10)0.0050 (9)
C60.0484 (11)0.0450 (11)0.0354 (11)0.0057 (8)0.0022 (8)0.0026 (8)
C70.0366 (9)0.0434 (10)0.0307 (10)0.0063 (8)−0.0021 (7)−0.0041 (8)
C80.0303 (9)0.0443 (10)0.0332 (10)0.0097 (8)0.0041 (7)−0.0018 (8)
C90.0273 (8)0.0381 (9)0.0347 (10)0.0087 (7)0.0053 (7)−0.0034 (7)
C100.0402 (9)0.0441 (11)0.0367 (10)0.0056 (8)0.0126 (8)0.0024 (8)
C110.0412 (10)0.0405 (10)0.0523 (12)−0.0033 (8)0.0174 (9)−0.0041 (9)
C120.0285 (9)0.0428 (10)0.0464 (11)0.0023 (8)0.0021 (8)−0.0098 (9)
C130.0379 (10)0.0454 (11)0.0395 (11)0.0037 (8)−0.0027 (8)0.0022 (8)
C140.0342 (9)0.0404 (10)0.0406 (11)−0.0016 (7)−0.0002 (8)0.0027 (8)
N1—C71.276 (2)C4—H40.9300
N1—N21.3830 (18)C5—C61.383 (3)
N2—C81.346 (2)C5—H50.9300
N2—H20.91 (2)C6—H60.9300
N3—O31.208 (2)C7—H70.9300
N3—O41.213 (2)C8—C91.501 (2)
N3—C121.481 (2)C9—C101.385 (2)
O1—C31.365 (2)C9—C141.390 (2)
O1—H10.85 (2)C10—C111.386 (2)
O2—C81.229 (2)C10—H100.9300
C1—C21.388 (2)C11—C121.374 (2)
C1—C61.391 (2)C11—H110.9300
C1—C71.462 (2)C12—C131.367 (2)
C2—C31.385 (2)C13—C141.382 (2)
C2—H2A0.9300C13—H130.9300
C3—C41.384 (2)C14—H140.9300
C4—C51.372 (3)
C7—N1—N2114.55 (14)C1—C6—H6120.2
C8—N2—N1120.57 (14)N1—C7—C1122.05 (16)
C8—N2—H2120.2 (12)N1—C7—H7119.0
N1—N2—H2118.3 (12)C1—C7—H7119.0
O3—N3—O4123.56 (18)O2—C8—N2123.16 (15)
O3—N3—C12117.62 (19)O2—C8—C9120.68 (16)
O4—N3—C12118.81 (18)N2—C8—C9116.16 (15)
C3—O1—H1111.7 (16)C10—C9—C14119.29 (15)
C2—C1—C6119.55 (15)C10—C9—C8117.42 (15)
C2—C1—C7121.39 (16)C14—C9—C8123.29 (16)
C6—C1—C7119.04 (15)C9—C10—C11120.24 (16)
C3—C2—C1119.96 (17)C9—C10—H10119.9
C3—C2—H2A120.0C11—C10—H10119.9
C1—C2—H2A120.0C12—C11—C10118.70 (17)
O1—C3—C4121.66 (15)C12—C11—H11120.7
O1—C3—C2117.95 (16)C10—C11—H11120.7
C4—C3—C2120.37 (16)C13—C12—C11122.60 (15)
C5—C4—C3119.48 (16)C13—C12—N3118.64 (17)
C5—C4—H4120.3C11—C12—N3118.75 (17)
C3—C4—H4120.3C12—C13—C14118.26 (16)
C4—C5—C6120.98 (18)C12—C13—H13120.9
C4—C5—H5119.5C14—C13—H13120.9
C6—C5—H5119.5C13—C14—C9120.91 (17)
C5—C6—C1119.64 (17)C13—C14—H14119.5
C5—C6—H6120.2C9—C14—H14119.5
D—H···AD—HH···AD···AD—H···A
N2—H2···O1i0.91 (2)2.11 (2)2.931 (2)149.3 (16)
O1—H1···O2ii0.85 (2)1.82 (2)2.6573 (17)167 (2)
Centroid–centroid*Distance (Å)Symmetry code
Cg1–Cg23.6803 (16)1 - x, -y, 1 - z
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O1i0.91 (2)2.11 (2)2.931 (2)149.3 (16)
O1—H1⋯O2ii0.85 (2)1.82 (2)2.6573 (17)167 (2)

Symmetry codes: (i) ; (ii) .

Table 2

Overview of π–π ring inter­actions in the structure

Cg1 and Cg2 are the centroids of the C1–C6 and C9–C14 benzene rings, respectively.

Centroid–centroidDistance (Å)Symmetry code
Cg1–Cg23.6803 (16)1 − x, −y, 1 − z
  10 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

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6.  4-Hy-droxy-N'-[1-(2-hy-droxy-phen-yl)ethyl-idene]benzohydrazide.

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7.  Microwave assisted synthesis and antimicrobial activity of 2-quinoxalinone-3-hydrazone derivatives.

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8.  N'-[1-(2-Amino-phen-yl)ethyl-idene]benzo-hydrazide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-24

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  10 in total
  3 in total

1.  (E)-N'-(2,4-Dichloro-benzyl-idene)-3-nitro-benzohydrazide.

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2.  (E)-N'-(3-Hy-droxy-benzyl-idene)-3-nitro-benzohydrazide.

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3.  4-Dimethyl-amino-N'-(2-hy-droxy-3,5-diiodo-benzyl-idene)benzohydrazide.

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  3 in total

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