| Literature DB >> 21589087 |
Shayma A Shaker1, Hamid Khaledi, Hapipah Mohd Ali.
Abstract
In the crystal structure of the title compound, C(8)H(9)N(2) (+)·SCN(-), the nearly planar 2-methyl-benzimidazolium cation [r.m.s. deviation = 0.0123 (4) Å] is perpendicular to a mirror plane and the methyl H atoms are disordered about the mirror plane with equal occupancies. The thio-cyanate anion also lies on a mirror plane. N-H⋯N hydrogen bonds link the components into an infinite chain along the b axis.Entities:
Year: 2010 PMID: 21589087 PMCID: PMC3009281 DOI: 10.1107/S1600536810042145
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H9N2+·SCN− | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2n | Cell parameters from 4285 reflections |
| θ = 2.6–30.3° | |
| µ = 0.31 mm−1 | |
| Block, colorless | |
| 0.40 × 0.29 × 0.15 mm |
| Bruker APEXII CCD diffractometer | 1133 independent reflections |
| Radiation source: fine-focus sealed tube | 1000 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 10495 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1133 reflections | (Δ/σ)max < 0.001 |
| 71 parameters | Δρmax = 0.39 e Å−3 |
| 1 restraint | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | −0.11964 (6) | 0.2500 | 0.31732 (5) | 0.02094 (18) | |
| N1 | 0.15210 (19) | 0.2500 | 0.37930 (15) | 0.0193 (4) | |
| C1 | 0.0383 (2) | 0.2500 | 0.35335 (17) | 0.0162 (4) | |
| H2 | 0.2584 (17) | 0.485 (2) | 0.3813 (13) | 0.019* | |
| N2 | 0.28838 (12) | 0.60009 (17) | 0.38143 (10) | 0.0155 (3) | |
| C2 | 0.0609 (2) | 0.7500 | 0.38575 (17) | 0.0191 (5) | |
| H2A | 0.0277 | 0.8779 | 0.3825 | 0.029* | 0.50 |
| H2B | 0.0299 | 0.6922 | 0.4503 | 0.029* | 0.50 |
| H2BA | 0.0258 | 0.6800 | 0.3264 | 0.029* | 0.50 |
| C3 | 0.2103 (2) | 0.7500 | 0.38283 (15) | 0.0156 (4) | |
| C4 | 0.42343 (15) | 0.6534 (2) | 0.37939 (11) | 0.0148 (3) | |
| C5 | 0.54317 (15) | 0.5525 (2) | 0.37848 (11) | 0.0179 (3) | |
| H5 | 0.5432 | 0.4209 | 0.3774 | 0.022* | |
| C6 | 0.66199 (15) | 0.6529 (2) | 0.37921 (11) | 0.0189 (3) | |
| H6 | 0.7460 | 0.5887 | 0.3797 | 0.023* |
| S1 | 0.0159 (3) | 0.0182 (3) | 0.0287 (3) | 0.000 | −0.0020 (2) | 0.000 |
| N1 | 0.0179 (9) | 0.0140 (9) | 0.0260 (10) | 0.000 | 0.0024 (7) | 0.000 |
| C1 | 0.0200 (10) | 0.0105 (9) | 0.0182 (10) | 0.000 | 0.0034 (8) | 0.000 |
| N2 | 0.0169 (6) | 0.0104 (6) | 0.0191 (6) | −0.0018 (5) | 0.0000 (5) | 0.0004 (5) |
| C2 | 0.0170 (10) | 0.0192 (11) | 0.0211 (11) | 0.000 | 0.0015 (8) | 0.000 |
| C3 | 0.0193 (10) | 0.0151 (10) | 0.0126 (9) | 0.000 | −0.0012 (8) | 0.000 |
| C4 | 0.0168 (7) | 0.0141 (7) | 0.0135 (6) | −0.0007 (6) | −0.0004 (5) | 0.0004 (5) |
| C5 | 0.0215 (7) | 0.0126 (7) | 0.0197 (7) | 0.0023 (6) | −0.0015 (6) | −0.0003 (6) |
| C6 | 0.0175 (7) | 0.0200 (8) | 0.0193 (7) | 0.0026 (6) | −0.0007 (6) | 0.0001 (6) |
| S1—C1 | 1.628 (2) | C2—H2BA | 0.9800 |
| N1—C1 | 1.173 (3) | C4—C5 | 1.389 (2) |
| N2—C3 | 1.3289 (18) | C4—C4i | 1.394 (3) |
| N2—C4 | 1.3888 (19) | C5—C6 | 1.379 (2) |
| N2—H2 | 0.881 (15) | C5—H5 | 0.9500 |
| C2—C3 | 1.477 (3) | C6—C6i | 1.401 (3) |
| C2—H2A | 0.9800 | C6—H6 | 0.9500 |
| C2—H2B | 0.9800 | ||
| N1—C1—S1 | 180.0 (2) | N2—C3—C2 | 125.52 (9) |
| C3—N2—C4 | 109.44 (13) | N2—C4—C5 | 132.32 (14) |
| C3—N2—H2 | 124.8 (12) | N2—C4—C4i | 106.08 (8) |
| C4—N2—H2 | 125.7 (12) | C5—C4—C4i | 121.60 (9) |
| C3—C2—H2A | 109.5 | C6—C5—C4 | 116.72 (15) |
| C3—C2—H2B | 109.5 | C6—C5—H5 | 121.6 |
| H2A—C2—H2B | 109.5 | C4—C5—H5 | 121.6 |
| C3—C2—H2BA | 109.5 | C5—C6—C6i | 121.67 (9) |
| H2A—C2—H2BA | 109.5 | C5—C6—H6 | 119.2 |
| H2B—C2—H2BA | 109.5 | C6i—C6—H6 | 119.2 |
| N2—C3—N2i | 108.97 (18) |
| H··· | ||||
| N2—H2···N1 | 0.88 (2) | 2.00 (2) | 2.8627 (16) | 168 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯N1 | 0.88 (2) | 2.00 (2) | 2.8627 (16) | 168 (2) |