Literature DB >> 21588949

Ethyl 2-{(2Z)-2-[(1-naphthyl-sulfon-yl)imino]-2,3-dihydro-1,3-thia-zol-4-yl}acetate monohydrate.

Gabriel Navarrete-Vázquez, Guadalupe Morales-Vilchis, Samuel Estrada-Soto, Verónica Rodríguez-López, Hugo Tlahuext.   

Abstract

The title compound, C(17)H(16)N(2)O(4)S(2)·H(2)O, is of inter-est with respect to its anti-diabetic and anti-obesity activity. In the crystal, the packing is stabilized by three cooperative inter-actions: offset π-π inter-actions [centroid-centroid distance = 3.604 (2) Å], as well as C-H⋯O and O-H⋯O hydrogen bonds. N-H⋯O inter-actions also occur.

Entities:  

Year:  2010        PMID: 21588949      PMCID: PMC3009274          DOI: 10.1107/S1600536810039279

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For similar structures and their anti­diabetic activity, see: Navarrete-Vázquez et al. (2008 ▶); Alberts et al. (2002 ▶); Barf et al. (2002 ▶); Fotsch & Wang (2008 ▶); Saiah (2008 ▶); Vicker et al. (2007 ▶). For hydrogen bonds, see: Adams et al. (1996 ▶); Desiraju & Steiner (1999 ▶); Hanton et al. (1992 ▶).

Experimental

Crystal data

C17H16N2O4S2·H2O M = 394.45 Orthorhombic, a = 29.582 (6) Å b = 7.9657 (17) Å c = 15.676 (3) Å V = 3694.0 (14) Å3 Z = 8 Mo Kα radiation μ = 0.32 mm−1 T = 273 K 0.29 × 0.21 × 0.17 mm

Data collection

Bruker SMART APEX CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.913, T max = 0.948 33131 measured reflections 3255 independent reflections 2488 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.143 S = 1.09 3255 reflections 236 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT-Plus-NT (Bruker, 2001 ▶); data reduction: SAINT-Plus-NT; program(s) used to solve structure: SHELXTL-NT (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL-NT; molecular graphics: SHELXTL-NT; software used to prepare material for publication: PLATON (Spek, 2009 ▶), DIAMOND (Bergerhoff et al., 1996 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810039279/jh2215sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810039279/jh2215Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H16N2O4S2·H2ODx = 1.419 Mg m3
Mr = 394.45Melting point: 371 K
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 7399 reflections
a = 29.582 (6) Åθ = 2.6–23.6°
b = 7.9657 (17) ŵ = 0.32 mm1
c = 15.676 (3) ÅT = 273 K
V = 3694.0 (14) Å3Rectangular prism, colourless
Z = 80.29 × 0.21 × 0.17 mm
F(000) = 1648
Bruker SMART APEX CCD area detector diffractometer3255 independent reflections
Radiation source: fine-focus sealed tube2488 reflections with I > 2σ(I)
graphiteRint = 0.056
Detector resolution: 8.3 pixels mm-1θmax = 25.0°, θmin = 1.4°
phi and ω scansh = −35→35
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −9→9
Tmin = 0.913, Tmax = 0.948l = −18→18
33131 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.143H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0753P)2 + 1.2945P] where P = (Fo2 + 2Fc2)/3
3255 reflections(Δ/σ)max = 0.001
236 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.30111 (9)1.0099 (3)−0.01807 (17)0.0476 (7)
C20.27124 (10)1.0650 (4)0.0426 (2)0.0579 (8)
H20.28181.11800.09150.069*
C30.22466 (11)1.0411 (4)0.0306 (3)0.0694 (9)
H30.20441.07760.07190.083*
C40.20921 (10)0.9652 (4)−0.0408 (2)0.0679 (9)
H40.17820.9534−0.04870.081*
C50.23901 (10)0.9033 (4)−0.1037 (2)0.0562 (8)
C60.22292 (12)0.8195 (5)−0.1765 (2)0.0724 (10)
H60.19190.8057−0.18380.087*
C70.25155 (14)0.7585 (5)−0.2363 (2)0.0794 (11)
H70.24020.7041−0.28420.095*
C80.29822 (13)0.7776 (5)−0.2257 (2)0.0733 (9)
H80.31780.7355−0.26690.088*
C90.31544 (11)0.8571 (4)−0.15595 (18)0.0573 (7)
H90.34660.8675−0.14990.069*
C100.28653 (9)0.9240 (3)−0.09264 (18)0.0484 (7)
C110.38848 (8)0.8134 (3)0.08417 (17)0.0433 (6)
C120.40857 (8)0.5962 (3)0.17449 (16)0.0436 (6)
C130.39714 (10)0.7109 (4)0.23161 (18)0.0557 (7)
H130.39840.69300.29020.067*
C140.42320 (9)0.4204 (3)0.18915 (18)0.0496 (7)
H14A0.40130.34570.16300.060*
H14B0.42300.39860.25000.060*
C150.46919 (9)0.3790 (4)0.15489 (18)0.0508 (7)
C160.51735 (11)0.1490 (5)0.1211 (3)0.0821 (11)
H16A0.54250.18020.15750.099*
H16B0.52280.19290.06430.099*
C170.51244 (15)−0.0349 (5)0.1183 (3)0.1036 (14)
H17A0.5089−0.07740.17520.155*
H17B0.5389−0.08350.09280.155*
H17C0.4863−0.06370.08500.155*
N10.38373 (7)0.8826 (3)0.00845 (14)0.0499 (6)
N20.40331 (7)0.6559 (3)0.09207 (13)0.0428 (5)
H2A0.40930.59470.04830.051*
O10.36124 (7)1.1601 (2)0.07509 (14)0.0648 (6)
O20.37576 (7)1.1370 (3)−0.07715 (14)0.0639 (6)
O30.49668 (8)0.4789 (3)0.13212 (19)0.0858 (8)
O40.47548 (7)0.2156 (3)0.15495 (15)0.0698 (6)
O50.57738 (8)0.5513 (3)0.04480 (16)0.0876 (8)
H5A0.58420.65350.04840.131*
H5B0.55180.54500.06790.131*
S10.35869 (2)1.05939 (9)−0.00081 (5)0.0514 (2)
S20.37963 (3)0.89724 (10)0.18608 (5)0.0577 (3)
U11U22U33U12U13U23
C10.0426 (14)0.0430 (14)0.0572 (16)−0.0020 (12)−0.0018 (12)0.0115 (13)
C20.0547 (18)0.0499 (17)0.0692 (19)0.0008 (13)0.0047 (15)0.0069 (15)
C30.0510 (18)0.063 (2)0.094 (3)0.0032 (15)0.0181 (18)0.0091 (19)
C40.0385 (15)0.067 (2)0.098 (3)−0.0065 (14)0.0017 (17)0.023 (2)
C50.0482 (17)0.0538 (17)0.0665 (18)−0.0140 (13)−0.0068 (14)0.0201 (15)
C60.062 (2)0.074 (2)0.082 (2)−0.0258 (18)−0.0198 (19)0.026 (2)
C70.097 (3)0.078 (2)0.063 (2)−0.034 (2)−0.019 (2)0.0146 (19)
C80.087 (3)0.075 (2)0.058 (2)−0.0155 (19)0.0034 (18)0.0084 (17)
C90.0561 (17)0.0624 (19)0.0534 (17)−0.0079 (14)0.0026 (14)0.0120 (15)
C100.0447 (15)0.0450 (15)0.0555 (16)−0.0063 (12)−0.0026 (13)0.0184 (13)
C110.0314 (12)0.0479 (15)0.0505 (16)−0.0008 (11)−0.0009 (11)−0.0038 (12)
C120.0347 (13)0.0540 (17)0.0422 (14)0.0008 (11)0.0002 (11)0.0044 (12)
C130.0617 (17)0.0663 (19)0.0391 (15)0.0072 (15)0.0040 (13)0.0001 (14)
C140.0413 (15)0.0563 (17)0.0512 (16)0.0022 (12)0.0036 (12)0.0065 (13)
C150.0423 (15)0.0605 (19)0.0494 (16)0.0001 (14)−0.0031 (12)−0.0024 (14)
C160.0498 (18)0.092 (3)0.105 (3)0.0127 (17)0.0076 (18)−0.036 (2)
C170.088 (3)0.086 (3)0.137 (4)0.028 (2)0.028 (3)−0.019 (3)
N10.0469 (13)0.0547 (14)0.0480 (13)0.0037 (11)−0.0023 (10)0.0069 (11)
N20.0409 (12)0.0480 (13)0.0395 (11)0.0024 (10)0.0001 (9)−0.0034 (9)
O10.0653 (14)0.0492 (12)0.0798 (15)0.0002 (9)−0.0171 (11)−0.0087 (11)
O20.0493 (11)0.0649 (13)0.0774 (14)−0.0120 (10)−0.0017 (10)0.0266 (11)
O30.0549 (13)0.0784 (16)0.124 (2)−0.0084 (13)0.0285 (13)−0.0052 (15)
O40.0510 (12)0.0629 (14)0.0955 (17)0.0114 (10)0.0146 (11)−0.0053 (12)
O50.0865 (17)0.0755 (16)0.1008 (18)−0.0314 (13)0.0476 (14)−0.0389 (14)
S10.0429 (4)0.0474 (4)0.0641 (5)−0.0047 (3)−0.0060 (3)0.0101 (3)
S20.0665 (5)0.0547 (5)0.0520 (4)0.0092 (4)0.0064 (3)−0.0083 (3)
C1—C21.370 (4)C12—N21.385 (3)
C1—C101.421 (4)C12—C141.484 (4)
C1—S11.769 (3)C13—S21.727 (3)
C2—C31.404 (4)C13—H130.9300
C2—H20.9300C14—C151.499 (4)
C3—C41.352 (5)C14—H14A0.9700
C3—H30.9300C14—H14B0.9700
C4—C51.411 (5)C15—O31.193 (3)
C4—H40.9300C15—O41.315 (3)
C5—C61.406 (4)C16—O41.448 (4)
C5—C101.426 (4)C16—C171.473 (5)
C6—C71.353 (5)C16—H16A0.9700
C6—H60.9300C16—H16B0.9700
C7—C81.399 (5)C17—H17A0.9600
C7—H70.9300C17—H17B0.9600
C8—C91.363 (4)C17—H17C0.9600
C8—H80.9300N1—S11.598 (2)
C9—C101.414 (4)N2—H2A0.8600
C9—H90.9300O1—S11.437 (2)
C11—N11.316 (3)O2—S11.439 (2)
C11—N21.335 (3)O5—H5A0.8399
C11—S21.751 (3)O5—H5B0.8400
C12—C131.323 (4)
C2—C1—C10121.9 (3)C12—C13—H13123.5
C2—C1—S1116.3 (2)S2—C13—H13123.5
C10—C1—S1121.7 (2)C12—C14—C15114.6 (2)
C1—C2—C3119.8 (3)C12—C14—H14A108.6
C1—C2—H2120.1C15—C14—H14A108.6
C3—C2—H2120.1C12—C14—H14B108.6
C4—C3—C2120.2 (3)C15—C14—H14B108.6
C4—C3—H3119.9H14A—C14—H14B107.6
C2—C3—H3119.9O3—C15—O4124.4 (3)
C3—C4—C5121.5 (3)O3—C15—C14125.4 (3)
C3—C4—H4119.2O4—C15—C14110.2 (2)
C5—C4—H4119.2O4—C16—C17106.9 (3)
C6—C5—C4121.4 (3)O4—C16—H16A110.3
C6—C5—C10119.2 (3)C17—C16—H16A110.3
C4—C5—C10119.4 (3)O4—C16—H16B110.3
C7—C6—C5121.4 (3)C17—C16—H16B110.3
C7—C6—H6119.3H16A—C16—H16B108.6
C5—C6—H6119.3C16—C17—H17A109.5
C6—C7—C8119.8 (3)C16—C17—H17B109.5
C6—C7—H7120.1H17A—C17—H17B109.5
C8—C7—H7120.1C16—C17—H17C109.5
C9—C8—C7120.9 (3)H17A—C17—H17C109.5
C9—C8—H8119.5H17B—C17—H17C109.5
C7—C8—H8119.5C11—N1—S1120.0 (2)
C8—C9—C10120.8 (3)C11—N2—C12116.5 (2)
C8—C9—H9119.6C11—N2—H2A121.8
C10—C9—H9119.6C12—N2—H2A121.8
C9—C10—C1125.1 (3)C15—O4—C16118.9 (3)
C9—C10—C5117.9 (3)H5A—O5—H5B104.1
C1—C10—C5117.0 (3)O1—S1—O2115.50 (13)
N1—C11—N2120.8 (2)O1—S1—N1113.12 (12)
N1—C11—S2130.3 (2)O2—S1—N1106.95 (13)
N2—C11—S2108.83 (19)O1—S1—C1107.55 (13)
C13—C12—N2111.4 (2)O2—S1—C1107.85 (13)
C13—C12—C14128.4 (2)N1—S1—C1105.29 (12)
N2—C12—C14120.1 (2)C13—S2—C1190.25 (13)
C12—C13—S2113.0 (2)
C10—C1—C2—C3−1.8 (4)N2—C12—C14—C1562.3 (3)
S1—C1—C2—C3175.5 (2)C12—C14—C15—O314.1 (4)
C1—C2—C3—C4−0.5 (5)C12—C14—C15—O4−167.2 (2)
C2—C3—C4—C52.1 (5)N2—C11—N1—S1170.26 (19)
C3—C4—C5—C6177.9 (3)S2—C11—N1—S1−11.7 (3)
C3—C4—C5—C10−1.3 (4)N1—C11—N2—C12178.0 (2)
C4—C5—C6—C7−179.3 (3)S2—C11—N2—C12−0.4 (3)
C10—C5—C6—C7−0.1 (5)C13—C12—N2—C110.4 (3)
C5—C6—C7—C80.4 (5)C14—C12—N2—C11177.6 (2)
C6—C7—C8—C90.0 (5)O3—C15—O4—C16−3.5 (5)
C7—C8—C9—C10−0.7 (5)C14—C15—O4—C16177.7 (3)
C8—C9—C10—C1−179.5 (3)C17—C16—O4—C15−172.3 (3)
C8—C9—C10—C50.9 (4)C11—N1—S1—O126.1 (3)
C2—C1—C10—C9−177.0 (3)C11—N1—S1—O2154.4 (2)
S1—C1—C10—C95.7 (4)C11—N1—S1—C1−91.0 (2)
C2—C1—C10—C52.5 (4)C2—C1—S1—O1−3.2 (2)
S1—C1—C10—C5−174.7 (2)C10—C1—S1—O1174.1 (2)
C6—C5—C10—C9−0.5 (4)C2—C1—S1—O2−128.4 (2)
C4—C5—C10—C9178.6 (3)C10—C1—S1—O248.9 (2)
C6—C5—C10—C1179.9 (3)C2—C1—S1—N1117.7 (2)
C4—C5—C10—C1−1.0 (4)C10—C1—S1—N1−65.0 (2)
N2—C12—C13—S2−0.2 (3)C12—C13—S2—C110.0 (2)
C14—C12—C13—S2−177.1 (2)N1—C11—S2—C13−177.9 (3)
C13—C12—C14—C15−121.0 (3)N2—C11—S2—C130.27 (19)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O5i0.861.912.767 (3)177
O5—H5A···O2ii0.842.102.889 (3)157
C13—H13···O2iii0.932.573.295 (4)135
C14—H14A···O1iv0.972.343.295 (3)167
C17—H17B···O2i0.962.573.466 (5)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O5i0.861.912.767 (3)177
O5—H5A⋯O2ii0.842.102.889 (3)157
C13—H13⋯O2iii0.932.573.295 (4)135
C14—H14A⋯O1iv0.972.343.295 (3)167
C17—H17B⋯O2i0.962.573.466 (5)155

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Review 5.  The role of 11beta-hydroxysteroid dehydrogenase in metabolic disease and therapeutic potential of 11beta-hsd1 inhibitors.

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Journal:  J Med Chem       Date:  2002-08-29       Impact factor: 7.446

7.  4-Meth-oxy-N-[6-methyl-2,3-dihydro-1,3-benzothia-zol-2-yl-idene]benzene-sulfonamide.

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