| Literature DB >> 21588947 |
Abstract
In the title 1:1 adduct, C(10)H(8)N(2)·C(10)H(12)O(8), the dihedral angle between the pyridine rings in the 4,4-bipyridine molecule is 8.33 (13)°. In the crystal, the cyclo-hexane-1,2,4,5-tetra-carb-oxy-lic acid mol-ecules inter-act with each other through inter-molecular O-H⋯O hydrogen bonds, forming an infinite chain along the a axis, which is further linked perpendicularly by O-H⋯N hydrogen bonds involving bipyridine, resulting in a supra-molecular corrugated sheet parallel to the (110) plane.Entities:
Year: 2010 PMID: 21588947 PMCID: PMC3009091 DOI: 10.1107/S1600536810039024
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8N2·C10H12O8 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3417 reflections |
| θ = 1.7–25.2° | |
| µ = 0.11 mm−1 | |
| β = 106.364 (3)° | Block, colourless |
| 0.22 × 0.15 × 0.08 mm | |
| Bruker APEXII area-detector diffractometer | 3416 independent reflections |
| Radiation source: fine-focus sealed tube | 2243 reflections with |
| graphite | |
| φ and ω scan | θmax = 25.2°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 9330 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3416 reflections | (Δ/σ)max < 0.001 |
| 275 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.27706 (14) | 0.44090 (19) | 0.44732 (12) | 0.0641 (5) | |
| H1 | 0.2994 | 0.5168 | 0.4665 | 0.096* | |
| O2 | 0.11097 (14) | 0.54658 (17) | 0.41482 (10) | 0.0518 (5) | |
| O3 | 0.18983 (14) | 0.55768 (18) | 0.23240 (12) | 0.0636 (5) | |
| O4 | 0.34420 (14) | 0.42876 (17) | 0.26978 (12) | 0.0589 (5) | |
| H4 | 0.3756 | 0.5037 | 0.2794 | 0.088* | |
| O5 | −0.04992 (17) | 0.3310 (2) | 0.45621 (11) | 0.0667 (5) | |
| H5 | −0.0883 | 0.3681 | 0.4832 | 0.100* | |
| O6 | −0.15670 (16) | 0.4586 (2) | 0.35120 (11) | 0.0692 (6) | |
| O7 | −0.05944 (14) | 0.47589 (18) | 0.07724 (9) | 0.0553 (5) | |
| O8 | 0.10445 (14) | 0.3927 (2) | 0.06854 (10) | 0.0578 (5) | |
| H8 | 0.0852 | 0.4324 | 0.0229 | 0.087* | |
| C11 | 0.0262 (2) | 0.4068 (2) | 0.10675 (14) | 0.0448 (6) | |
| C12 | 0.04494 (19) | 0.3292 (2) | 0.18872 (13) | 0.0434 (6) | |
| H12 | 0.0147 | 0.2365 | 0.1738 | 0.052* | |
| C13 | −0.02428 (18) | 0.3930 (2) | 0.24293 (13) | 0.0439 (6) | |
| H13A | −0.0030 | 0.4887 | 0.2537 | 0.053* | |
| H13B | −0.1037 | 0.3900 | 0.2120 | 0.053* | |
| C14 | −0.00665 (19) | 0.3186 (2) | 0.32665 (14) | 0.0447 (6) | |
| H14 | −0.0332 | 0.2241 | 0.3130 | 0.054* | |
| C15 | −0.0792 (2) | 0.3797 (3) | 0.37755 (15) | 0.0510 (6) | |
| C16 | 0.11869 (19) | 0.3086 (2) | 0.37600 (14) | 0.0439 (6) | |
| H16 | 0.1234 | 0.2463 | 0.4236 | 0.053* | |
| C17 | 0.1676 (2) | 0.4448 (3) | 0.41336 (13) | 0.0448 (6) | |
| C18 | 0.1851 (2) | 0.2407 (2) | 0.32092 (14) | 0.0462 (6) | |
| H18A | 0.1610 | 0.1457 | 0.3110 | 0.055* | |
| H18B | 0.2646 | 0.2405 | 0.3517 | 0.055* | |
| C19 | 0.17057 (19) | 0.3116 (2) | 0.23536 (14) | 0.0426 (6) | |
| H19 | 0.2032 | 0.2509 | 0.2011 | 0.051* | |
| C20 | 0.23417 (19) | 0.4466 (2) | 0.24532 (13) | 0.0434 (6) | |
| N1 | 0.64426 (18) | 1.3190 (2) | 0.48929 (14) | 0.0598 (6) | |
| N2 | 0.45114 (19) | 0.6692 (2) | 0.31157 (14) | 0.0628 (6) | |
| C1 | 0.3891 (2) | 0.7823 (3) | 0.2905 (2) | 0.0752 (9) | |
| H1A | 0.3180 | 0.7743 | 0.2521 | 0.090* | |
| C2 | 0.5531 (2) | 0.6854 (3) | 0.36420 (18) | 0.0708 (8) | |
| H2 | 0.5992 | 0.6083 | 0.3784 | 0.085* | |
| C3 | 0.5951 (2) | 0.8100 (3) | 0.39928 (17) | 0.0642 (8) | |
| H3 | 0.6675 | 0.8154 | 0.4360 | 0.077* | |
| C4 | 0.4243 (2) | 0.9105 (3) | 0.32249 (19) | 0.0713 (8) | |
| H4A | 0.3774 | 0.9863 | 0.3056 | 0.086* | |
| C5 | 0.5293 (2) | 0.9264 (3) | 0.37970 (15) | 0.0502 (6) | |
| C6 | 0.5699 (2) | 1.0628 (3) | 0.41730 (15) | 0.0510 (6) | |
| C7 | 0.6679 (2) | 1.0774 (3) | 0.4825 (2) | 0.0817 (10) | |
| H7 | 0.7114 | 1.0005 | 0.5039 | 0.098* | |
| C8 | 0.7015 (2) | 1.2050 (3) | 0.5157 (2) | 0.0809 (10) | |
| H8A | 0.7682 | 1.2116 | 0.5592 | 0.097* | |
| C9 | 0.5115 (2) | 1.1812 (3) | 0.39072 (19) | 0.0710 (8) | |
| H9 | 0.4452 | 1.1782 | 0.3466 | 0.085* | |
| C10 | 0.5494 (2) | 1.3050 (3) | 0.42825 (19) | 0.0770 (9) | |
| H10 | 0.5059 | 1.3829 | 0.4096 | 0.092* |
| O1 | 0.0506 (10) | 0.0539 (12) | 0.0736 (12) | 0.0025 (9) | −0.0055 (9) | −0.0150 (9) |
| O2 | 0.0551 (10) | 0.0423 (10) | 0.0511 (10) | 0.0043 (8) | 0.0035 (8) | −0.0037 (7) |
| O3 | 0.0496 (10) | 0.0378 (11) | 0.0928 (14) | −0.0003 (8) | 0.0027 (9) | 0.0034 (9) |
| O4 | 0.0451 (10) | 0.0509 (11) | 0.0739 (12) | −0.0023 (8) | 0.0055 (9) | −0.0018 (9) |
| O5 | 0.0850 (14) | 0.0675 (13) | 0.0526 (11) | 0.0182 (10) | 0.0275 (10) | 0.0121 (9) |
| O6 | 0.0627 (12) | 0.0789 (14) | 0.0641 (12) | 0.0200 (11) | 0.0148 (9) | 0.0068 (10) |
| O7 | 0.0520 (10) | 0.0667 (12) | 0.0430 (9) | 0.0097 (9) | 0.0066 (8) | 0.0042 (8) |
| O8 | 0.0573 (11) | 0.0720 (13) | 0.0431 (10) | 0.0095 (9) | 0.0123 (8) | 0.0055 (8) |
| C11 | 0.0442 (14) | 0.0421 (14) | 0.0432 (13) | −0.0045 (11) | 0.0042 (11) | −0.0098 (10) |
| C12 | 0.0472 (13) | 0.0361 (13) | 0.0405 (12) | −0.0070 (10) | 0.0019 (10) | −0.0041 (10) |
| C13 | 0.0406 (13) | 0.0433 (14) | 0.0429 (12) | −0.0008 (11) | 0.0040 (10) | 0.0006 (10) |
| C14 | 0.0496 (13) | 0.0344 (13) | 0.0472 (13) | −0.0021 (11) | 0.0090 (11) | −0.0006 (10) |
| C15 | 0.0538 (15) | 0.0488 (16) | 0.0481 (14) | −0.0035 (13) | 0.0106 (12) | 0.0012 (12) |
| C16 | 0.0499 (14) | 0.0350 (13) | 0.0435 (13) | 0.0012 (11) | 0.0079 (10) | 0.0055 (10) |
| C17 | 0.0506 (15) | 0.0448 (15) | 0.0341 (12) | 0.0025 (12) | 0.0038 (10) | 0.0021 (10) |
| C18 | 0.0528 (14) | 0.0309 (13) | 0.0500 (13) | 0.0029 (11) | 0.0064 (11) | 0.0011 (10) |
| C19 | 0.0460 (13) | 0.0346 (13) | 0.0447 (13) | 0.0006 (10) | 0.0085 (10) | −0.0041 (10) |
| C20 | 0.0417 (13) | 0.0461 (15) | 0.0377 (12) | −0.0015 (11) | 0.0037 (10) | −0.0014 (10) |
| N1 | 0.0532 (13) | 0.0507 (14) | 0.0681 (14) | −0.0042 (11) | 0.0051 (11) | −0.0076 (11) |
| N2 | 0.0562 (14) | 0.0545 (15) | 0.0725 (15) | −0.0120 (12) | 0.0098 (12) | −0.0052 (11) |
| C1 | 0.0527 (17) | 0.064 (2) | 0.097 (2) | −0.0059 (15) | 0.0005 (15) | −0.0144 (17) |
| C2 | 0.0712 (19) | 0.0468 (17) | 0.081 (2) | −0.0035 (14) | 0.0001 (16) | 0.0061 (14) |
| C3 | 0.0571 (16) | 0.0519 (17) | 0.0703 (18) | −0.0051 (13) | −0.0037 (13) | 0.0025 (13) |
| C4 | 0.0489 (16) | 0.0555 (18) | 0.096 (2) | −0.0009 (13) | −0.0007 (15) | −0.0136 (15) |
| C5 | 0.0472 (14) | 0.0479 (16) | 0.0551 (14) | −0.0075 (12) | 0.0140 (11) | −0.0017 (11) |
| C6 | 0.0438 (14) | 0.0524 (16) | 0.0554 (15) | −0.0050 (12) | 0.0116 (11) | −0.0009 (12) |
| C7 | 0.0556 (17) | 0.0535 (19) | 0.113 (3) | 0.0029 (14) | −0.0137 (17) | −0.0099 (17) |
| C8 | 0.0566 (18) | 0.063 (2) | 0.100 (2) | −0.0029 (16) | −0.0161 (16) | −0.0139 (17) |
| C9 | 0.0581 (17) | 0.0552 (18) | 0.0795 (19) | −0.0018 (14) | −0.0135 (14) | −0.0039 (14) |
| C10 | 0.0664 (19) | 0.0549 (19) | 0.090 (2) | 0.0023 (15) | −0.0099 (16) | −0.0040 (15) |
| O1—C17 | 1.310 (3) | C18—H18A | 0.9700 |
| O1—H1 | 0.8200 | C18—H18B | 0.9700 |
| O2—C17 | 1.215 (3) | C19—C20 | 1.515 (3) |
| O3—C20 | 1.202 (3) | C19—H19 | 0.9800 |
| O4—C20 | 1.315 (3) | N1—C10 | 1.319 (3) |
| O4—H4 | 0.8200 | N1—C8 | 1.321 (3) |
| O5—C15 | 1.332 (3) | N2—C2 | 1.321 (3) |
| O5—H5 | 0.8200 | N2—C1 | 1.329 (4) |
| O6—C15 | 1.207 (3) | C1—C4 | 1.375 (4) |
| O7—C11 | 1.231 (3) | C1—H1A | 0.9300 |
| O8—C11 | 1.301 (3) | C2—C3 | 1.379 (4) |
| O8—H8 | 0.8200 | C2—H2 | 0.9300 |
| C11—C12 | 1.508 (3) | C3—C5 | 1.378 (4) |
| C12—C13 | 1.532 (3) | C3—H3 | 0.9300 |
| C12—C19 | 1.534 (3) | C4—C5 | 1.380 (3) |
| C12—H12 | 0.9800 | C4—H4A | 0.9300 |
| C13—C14 | 1.520 (3) | C5—C6 | 1.490 (3) |
| C13—H13A | 0.9700 | C6—C9 | 1.364 (4) |
| C13—H13B | 0.9700 | C6—C7 | 1.381 (4) |
| C14—C15 | 1.512 (3) | C7—C8 | 1.372 (4) |
| C14—C16 | 1.535 (3) | C7—H7 | 0.9300 |
| C14—H14 | 0.9800 | C8—H8A | 0.9300 |
| C16—C17 | 1.513 (3) | C9—C10 | 1.374 (4) |
| C16—C18 | 1.534 (3) | C9—H9 | 0.9300 |
| C16—H16 | 0.9800 | C10—H10 | 0.9300 |
| C18—C19 | 1.535 (3) | ||
| C17—O1—H1 | 109.5 | H18A—C18—H18B | 107.6 |
| C20—O4—H4 | 109.5 | C20—C19—C12 | 112.18 (19) |
| C15—O5—H5 | 109.5 | C20—C19—C18 | 111.54 (18) |
| C11—O8—H8 | 109.5 | C12—C19—C18 | 110.52 (19) |
| O7—C11—O8 | 122.5 (2) | C20—C19—H19 | 107.5 |
| O7—C11—C12 | 121.7 (2) | C12—C19—H19 | 107.5 |
| O8—C11—C12 | 115.7 (2) | C18—C19—H19 | 107.5 |
| C11—C12—C13 | 110.54 (19) | O3—C20—O4 | 123.5 (2) |
| C11—C12—C19 | 112.56 (19) | O3—C20—C19 | 124.3 (2) |
| C13—C12—C19 | 113.81 (18) | O4—C20—C19 | 112.2 (2) |
| C11—C12—H12 | 106.5 | C10—N1—C8 | 116.2 (2) |
| C13—C12—H12 | 106.5 | C2—N2—C1 | 116.4 (2) |
| C19—C12—H12 | 106.5 | N2—C1—C4 | 123.6 (3) |
| C14—C13—C12 | 112.17 (19) | N2—C1—H1A | 118.2 |
| C14—C13—H13A | 109.2 | C4—C1—H1A | 118.2 |
| C12—C13—H13A | 109.2 | N2—C2—C3 | 123.8 (3) |
| C14—C13—H13B | 109.2 | N2—C2—H2 | 118.1 |
| C12—C13—H13B | 109.2 | C3—C2—H2 | 118.1 |
| H13A—C13—H13B | 107.9 | C5—C3—C2 | 119.8 (2) |
| C15—C14—C13 | 111.2 (2) | C5—C3—H3 | 120.1 |
| C15—C14—C16 | 113.39 (19) | C2—C3—H3 | 120.1 |
| C13—C14—C16 | 112.16 (19) | C1—C4—C5 | 119.9 (3) |
| C15—C14—H14 | 106.5 | C1—C4—H4A | 120.1 |
| C13—C14—H14 | 106.5 | C5—C4—H4A | 120.1 |
| C16—C14—H14 | 106.5 | C3—C5—C4 | 116.5 (2) |
| O6—C15—O5 | 123.2 (2) | C3—C5—C6 | 121.8 (2) |
| O6—C15—C14 | 125.7 (2) | C4—C5—C6 | 121.7 (2) |
| O5—C15—C14 | 111.1 (2) | C9—C6—C7 | 115.6 (2) |
| C17—C16—C18 | 113.58 (19) | C9—C6—C5 | 122.2 (2) |
| C17—C16—C14 | 112.76 (19) | C7—C6—C5 | 122.3 (2) |
| C18—C16—C14 | 109.87 (18) | C8—C7—C6 | 120.2 (3) |
| C17—C16—H16 | 106.7 | C8—C7—H7 | 119.9 |
| C18—C16—H16 | 106.7 | C6—C7—H7 | 119.9 |
| C14—C16—H16 | 106.7 | N1—C8—C7 | 123.7 (3) |
| O2—C17—O1 | 123.0 (2) | N1—C8—H8A | 118.2 |
| O2—C17—C16 | 123.7 (2) | C7—C8—H8A | 118.2 |
| O1—C17—C16 | 113.2 (2) | C6—C9—C10 | 120.9 (2) |
| C16—C18—C19 | 114.08 (18) | C6—C9—H9 | 119.6 |
| C16—C18—H18A | 108.7 | C10—C9—H9 | 119.6 |
| C19—C18—H18A | 108.7 | N1—C10—C9 | 123.4 (3) |
| C16—C18—H18B | 108.7 | N1—C10—H10 | 118.3 |
| C19—C18—H18B | 108.7 | C9—C10—H10 | 118.3 |
| H··· | ||||
| O1—H1···N1i | 0.82 | 1.81 | 2.630 (3) | 177 |
| O4—H4···N2 | 0.82 | 1.86 | 2.678 (3) | 175 |
| O5—H5···O2ii | 0.82 | 1.96 | 2.723 (2) | 153 |
| O8—H8···O7iii | 0.82 | 1.82 | 2.641 (2) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1i | 0.82 | 1.81 | 2.630 (3) | 177 |
| O4—H4⋯N2 | 0.82 | 1.86 | 2.678 (3) | 175 |
| O5—H5⋯O2ii | 0.82 | 1.96 | 2.723 (2) | 153 |
| O8—H8⋯O7iii | 0.82 | 1.82 | 2.641 (2) | 174 |
Symmetry codes: (i) ; (ii) ; (iii) .