| Literature DB >> 21588649 |
Nate Schultheiss1, Melanie Roe, Jared P Smit.
Abstract
In the title compound, 2C(17)H(18)N(2)O(6)·C(4)H(4)N(2) [systematic name: 3,5-dimethyl 2,6-dimethyl-4-(2-nitro-phen-yl)-1,4-di-hydro-pyridine-3,5-dicarboxyl-ate-pyrazine (2/1)], the complete pyrazine molecule is generated by crystallographic inversion symmetry. The center of the pyrazine ring lies on an inversion center. The nifedipine mol-ecules are linked into chains along the c axis through N-H⋯O hydrogen bonds, while the pyrazine mol-ecules are organized in the structure through van der Waals inter-actions.Entities:
Year: 2010 PMID: 21588649 PMCID: PMC3008143 DOI: 10.1107/S1600536810031703
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H20N3O6 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9767 reflections |
| θ = 2.6–31.7° | |
| µ = 0.11 mm−1 | |
| β = 94.841 (4)° | Prism, colourless |
| 0.24 × 0.18 × 0.10 mm | |
| Bruker APEXII CCD diffractometer | 4916 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 31.8°, θmin = 2.6° |
| φ and ω scans | |
| 27572 measured reflections | |
| 6070 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 6070 reflections | (Δ/σ)max < 0.001 |
| 261 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N11 | 0.91012 (7) | 0.66064 (10) | 0.58015 (6) | 0.01904 (17) | |
| H11 | 0.9275 (12) | 0.6672 (17) | 0.6420 (12) | 0.033 (4)* | |
| C12 | 0.96337 (7) | 0.73800 (11) | 0.52067 (6) | 0.01680 (18) | |
| C13 | 0.92963 (7) | 0.74418 (11) | 0.42914 (6) | 0.01588 (17) | |
| C14 | 0.82937 (7) | 0.68380 (10) | 0.39640 (6) | 0.01536 (17) | |
| H14 | 0.8323 | 0.6431 | 0.3324 | 0.018* | |
| C15 | 0.80215 (7) | 0.56174 (10) | 0.46039 (6) | 0.01635 (17) | |
| C16 | 0.83786 (7) | 0.56204 (11) | 0.55095 (7) | 0.01793 (18) | |
| C22 | 1.05495 (8) | 0.80615 (12) | 0.56668 (7) | 0.0214 (2) | |
| H22A | 1.0559 | 0.9104 | 0.5515 | 0.032* | |
| H22B | 1.1129 | 0.7586 | 0.5444 | 0.032* | |
| H22C | 1.0558 | 0.7940 | 0.6342 | 0.032* | |
| C23 | 0.98313 (7) | 0.80823 (11) | 0.35653 (7) | 0.01736 (18) | |
| O23 | 1.06719 (5) | 0.87616 (9) | 0.38444 (5) | 0.02116 (16) | |
| O24 | 0.95391 (6) | 0.80104 (11) | 0.27468 (5) | 0.0315 (2) | |
| C25 | 0.73593 (7) | 0.44528 (11) | 0.42414 (7) | 0.01813 (18) | |
| O25 | 0.71443 (6) | 0.45992 (8) | 0.33133 (5) | 0.02199 (16) | |
| O26 | 0.70447 (6) | 0.34517 (9) | 0.46697 (6) | 0.02589 (17) | |
| C26 | 0.80877 (9) | 0.46176 (12) | 0.62596 (7) | 0.0237 (2) | |
| H26A | 0.7373 | 0.4660 | 0.6291 | 0.036* | |
| H26B | 0.8418 | 0.4921 | 0.6858 | 0.036* | |
| H26C | 0.8282 | 0.3616 | 0.6121 | 0.036* | |
| C27 | 1.11954 (9) | 0.93700 (14) | 0.31148 (8) | 0.0264 (2) | |
| H27A | 1.1818 | 0.9789 | 0.3380 | 0.040* | |
| H27B | 1.0795 | 1.0136 | 0.2795 | 0.040* | |
| H27C | 1.1330 | 0.8601 | 0.2671 | 0.040* | |
| C28 | 0.65577 (9) | 0.34450 (13) | 0.28780 (8) | 0.0276 (2) | |
| H28A | 0.6401 | 0.3676 | 0.2219 | 0.041* | |
| H28B | 0.5946 | 0.3347 | 0.3184 | 0.041* | |
| H28C | 0.6926 | 0.2526 | 0.2934 | 0.041* | |
| C31 | 0.75049 (7) | 0.80317 (10) | 0.39303 (6) | 0.01571 (17) | |
| C32 | 0.67448 (7) | 0.82130 (11) | 0.32317 (7) | 0.01755 (18) | |
| N32 | 0.66655 (7) | 0.73025 (10) | 0.23900 (6) | 0.01976 (17) | |
| O32 | 0.73861 (6) | 0.71650 (9) | 0.19529 (5) | 0.02539 (17) | |
| O33 | 0.58615 (6) | 0.67540 (9) | 0.21593 (6) | 0.02713 (18) | |
| C33 | 0.60043 (8) | 0.92431 (12) | 0.32730 (7) | 0.0219 (2) | |
| H33 | 0.5497 | 0.9320 | 0.2782 | 0.026* | |
| C34 | 0.60109 (8) | 1.01542 (12) | 0.40326 (8) | 0.0239 (2) | |
| H34 | 0.5512 | 1.0872 | 0.4068 | 0.029* | |
| C35 | 0.67529 (8) | 1.00121 (12) | 0.47455 (7) | 0.0227 (2) | |
| H35 | 0.6763 | 1.0634 | 0.5273 | 0.027* | |
| C36 | 0.74769 (8) | 0.89694 (11) | 0.46907 (7) | 0.01926 (19) | |
| H36 | 0.7975 | 0.8886 | 0.5189 | 0.023* | |
| N41 | 0.45265 (8) | 0.46068 (12) | 0.41368 (7) | 0.0302 (2) | |
| C42 | 0.45577 (9) | 0.37242 (13) | 0.48684 (9) | 0.0289 (2) | |
| H42 | 0.4248 | 0.2796 | 0.4805 | 0.035* | |
| C43 | 0.50253 (9) | 0.41122 (14) | 0.57190 (8) | 0.0297 (2) | |
| H43 | 0.5027 | 0.3439 | 0.6220 | 0.036* |
| N11 | 0.0221 (4) | 0.0250 (4) | 0.0100 (3) | −0.0011 (3) | 0.0008 (3) | 0.0011 (3) |
| C12 | 0.0176 (4) | 0.0209 (4) | 0.0119 (4) | 0.0010 (3) | 0.0011 (3) | −0.0001 (3) |
| C13 | 0.0159 (4) | 0.0201 (4) | 0.0116 (4) | −0.0002 (3) | 0.0012 (3) | 0.0004 (3) |
| C14 | 0.0169 (4) | 0.0183 (4) | 0.0109 (4) | −0.0003 (3) | 0.0015 (3) | −0.0002 (3) |
| C15 | 0.0170 (4) | 0.0175 (4) | 0.0147 (4) | 0.0003 (3) | 0.0025 (3) | 0.0005 (3) |
| C16 | 0.0199 (4) | 0.0197 (4) | 0.0145 (4) | 0.0015 (3) | 0.0032 (3) | 0.0013 (3) |
| C22 | 0.0200 (5) | 0.0293 (5) | 0.0143 (4) | −0.0021 (4) | −0.0014 (3) | −0.0011 (4) |
| C23 | 0.0174 (4) | 0.0215 (4) | 0.0132 (4) | 0.0005 (3) | 0.0014 (3) | −0.0002 (3) |
| O23 | 0.0211 (3) | 0.0285 (4) | 0.0141 (3) | −0.0065 (3) | 0.0031 (3) | −0.0004 (3) |
| O24 | 0.0279 (4) | 0.0550 (6) | 0.0111 (3) | −0.0138 (4) | −0.0004 (3) | 0.0043 (3) |
| C25 | 0.0182 (4) | 0.0187 (4) | 0.0178 (4) | 0.0024 (3) | 0.0029 (3) | −0.0004 (3) |
| O25 | 0.0246 (4) | 0.0240 (4) | 0.0170 (3) | −0.0059 (3) | −0.0004 (3) | −0.0019 (3) |
| O26 | 0.0308 (4) | 0.0224 (4) | 0.0247 (4) | −0.0055 (3) | 0.0037 (3) | 0.0025 (3) |
| C26 | 0.0300 (5) | 0.0242 (5) | 0.0173 (4) | −0.0007 (4) | 0.0043 (4) | 0.0057 (4) |
| C27 | 0.0270 (5) | 0.0335 (6) | 0.0196 (5) | −0.0097 (4) | 0.0066 (4) | 0.0014 (4) |
| C28 | 0.0273 (5) | 0.0295 (5) | 0.0256 (5) | −0.0089 (4) | 0.0003 (4) | −0.0067 (4) |
| C31 | 0.0166 (4) | 0.0175 (4) | 0.0131 (4) | −0.0010 (3) | 0.0018 (3) | 0.0015 (3) |
| C32 | 0.0188 (4) | 0.0202 (4) | 0.0135 (4) | −0.0018 (3) | 0.0001 (3) | 0.0002 (3) |
| N32 | 0.0221 (4) | 0.0224 (4) | 0.0142 (4) | 0.0003 (3) | −0.0022 (3) | 0.0010 (3) |
| O32 | 0.0270 (4) | 0.0339 (4) | 0.0155 (3) | 0.0015 (3) | 0.0033 (3) | −0.0017 (3) |
| O33 | 0.0249 (4) | 0.0304 (4) | 0.0245 (4) | −0.0054 (3) | −0.0067 (3) | −0.0025 (3) |
| C33 | 0.0204 (5) | 0.0244 (5) | 0.0204 (5) | 0.0022 (4) | −0.0012 (3) | 0.0022 (4) |
| C34 | 0.0252 (5) | 0.0227 (5) | 0.0237 (5) | 0.0054 (4) | 0.0014 (4) | 0.0010 (4) |
| C35 | 0.0276 (5) | 0.0208 (4) | 0.0197 (5) | 0.0031 (4) | 0.0017 (4) | −0.0029 (4) |
| C36 | 0.0223 (5) | 0.0204 (4) | 0.0149 (4) | 0.0009 (3) | 0.0002 (3) | −0.0008 (3) |
| N41 | 0.0291 (5) | 0.0373 (5) | 0.0247 (5) | −0.0013 (4) | 0.0058 (4) | −0.0037 (4) |
| C42 | 0.0283 (6) | 0.0271 (5) | 0.0327 (6) | −0.0038 (4) | 0.0101 (4) | −0.0035 (5) |
| C43 | 0.0313 (6) | 0.0325 (6) | 0.0264 (5) | 0.0000 (5) | 0.0093 (4) | 0.0046 (5) |
| N11—C12 | 1.3682 (13) | C27—H27A | 0.9800 |
| N11—C16 | 1.3759 (13) | C27—H27B | 0.9800 |
| N11—H11 | 0.906 (17) | C27—H27C | 0.9800 |
| C12—C13 | 1.3636 (13) | C28—H28A | 0.9800 |
| C12—C22 | 1.4996 (14) | C28—H28B | 0.9800 |
| C13—C23 | 1.4507 (13) | C28—H28C | 0.9800 |
| C13—C14 | 1.5125 (13) | C31—C32 | 1.3937 (13) |
| C14—C15 | 1.5165 (13) | C31—C36 | 1.3973 (13) |
| C14—C31 | 1.5311 (13) | C32—C33 | 1.3865 (14) |
| C14—H14 | 1.0000 | C32—N32 | 1.4706 (13) |
| C15—C16 | 1.3566 (13) | N32—O32 | 1.2180 (12) |
| C15—C25 | 1.4651 (14) | N32—O33 | 1.2257 (12) |
| C16—C26 | 1.4989 (14) | C33—C34 | 1.3778 (15) |
| C22—H22A | 0.9800 | C33—H33 | 0.9500 |
| C22—H22B | 0.9800 | C34—C35 | 1.3871 (15) |
| C22—H22C | 0.9800 | C34—H34 | 0.9500 |
| C23—O24 | 1.2170 (12) | C35—C36 | 1.3802 (14) |
| C23—O23 | 1.3357 (12) | C35—H35 | 0.9500 |
| O23—C27 | 1.4342 (12) | C36—H36 | 0.9500 |
| C25—O26 | 1.2050 (12) | N41—C42 | 1.3282 (17) |
| C25—O25 | 1.3544 (12) | N41—C43i | 1.3311 (17) |
| O25—C28 | 1.4377 (13) | C42—C43 | 1.3819 (18) |
| C26—H26A | 0.9800 | C42—H42 | 0.9500 |
| C26—H26B | 0.9800 | C43—N41i | 1.3311 (17) |
| C26—H26C | 0.9800 | C43—H43 | 0.9500 |
| C12—N11—C16 | 123.46 (8) | O23—C27—H27B | 109.5 |
| C12—N11—H11 | 118.4 (10) | H27A—C27—H27B | 109.5 |
| C16—N11—H11 | 117.8 (10) | O23—C27—H27C | 109.5 |
| C13—C12—N11 | 118.48 (9) | H27A—C27—H27C | 109.5 |
| C13—C12—C22 | 127.75 (9) | H27B—C27—H27C | 109.5 |
| N11—C12—C22 | 113.77 (8) | O25—C28—H28A | 109.5 |
| C12—C13—C23 | 124.66 (9) | O25—C28—H28B | 109.5 |
| C12—C13—C14 | 120.65 (8) | H28A—C28—H28B | 109.5 |
| C23—C13—C14 | 114.68 (8) | O25—C28—H28C | 109.5 |
| C13—C14—C15 | 109.88 (8) | H28A—C28—H28C | 109.5 |
| C13—C14—C31 | 111.23 (8) | H28B—C28—H28C | 109.5 |
| C15—C14—C31 | 109.79 (8) | C32—C31—C36 | 115.33 (9) |
| C13—C14—H14 | 108.6 | C32—C31—C14 | 125.80 (8) |
| C15—C14—H14 | 108.6 | C36—C31—C14 | 118.66 (8) |
| C31—C14—H14 | 108.6 | C33—C32—C31 | 123.31 (9) |
| C16—C15—C25 | 120.41 (9) | C33—C32—N32 | 114.74 (9) |
| C16—C15—C14 | 119.99 (9) | C31—C32—N32 | 121.95 (9) |
| C25—C15—C14 | 119.60 (8) | O32—N32—O33 | 123.91 (9) |
| C15—C16—N11 | 119.08 (9) | O32—N32—C32 | 118.74 (9) |
| C15—C16—C26 | 126.89 (9) | O33—N32—C32 | 117.32 (9) |
| N11—C16—C26 | 114.01 (9) | C34—C33—C32 | 119.38 (10) |
| C12—C22—H22A | 109.5 | C34—C33—H33 | 120.3 |
| C12—C22—H22B | 109.5 | C32—C33—H33 | 120.3 |
| H22A—C22—H22B | 109.5 | C33—C34—C35 | 119.32 (10) |
| C12—C22—H22C | 109.5 | C33—C34—H34 | 120.3 |
| H22A—C22—H22C | 109.5 | C35—C34—H34 | 120.3 |
| H22B—C22—H22C | 109.5 | C36—C35—C34 | 120.14 (10) |
| O24—C23—O23 | 121.36 (9) | C36—C35—H35 | 119.9 |
| O24—C23—C13 | 122.49 (9) | C34—C35—H35 | 119.9 |
| O23—C23—C13 | 116.15 (8) | C35—C36—C31 | 122.51 (9) |
| C23—O23—C27 | 115.24 (8) | C35—C36—H36 | 118.7 |
| O26—C25—O25 | 121.79 (9) | C31—C36—H36 | 118.7 |
| O26—C25—C15 | 127.27 (9) | C42—N41—C43i | 115.38 (11) |
| O25—C25—C15 | 110.91 (8) | C42—N41—C42ii | 106.16 (7) |
| C25—O25—C28 | 115.21 (8) | C43i—N41—C42ii | 137.11 (8) |
| C16—C26—H26A | 109.5 | N41—C42—C43 | 122.15 (11) |
| C16—C26—H26B | 109.5 | N41—C42—H42 | 118.9 |
| H26A—C26—H26B | 109.5 | C43—C42—H42 | 118.9 |
| C16—C26—H26C | 109.5 | N41i—C43—C42 | 122.46 (11) |
| H26A—C26—H26C | 109.5 | N41i—C43—H43 | 118.8 |
| H26B—C26—H26C | 109.5 | C42—C43—H43 | 118.8 |
| O23—C27—H27A | 109.5 | ||
| C16—N11—C12—C13 | 15.45 (15) | C14—C15—C25—O26 | −176.60 (10) |
| C16—N11—C12—C22 | −164.07 (9) | C16—C15—C25—O25 | −175.78 (9) |
| N11—C12—C13—C23 | −173.05 (9) | C14—C15—C25—O25 | 5.23 (12) |
| C22—C12—C13—C23 | 6.40 (17) | O26—C25—O25—C28 | −2.79 (14) |
| N11—C12—C13—C14 | 7.81 (14) | C15—C25—O25—C28 | 175.50 (8) |
| C22—C12—C13—C14 | −172.75 (9) | C13—C14—C31—C32 | 138.67 (9) |
| C12—C13—C14—C15 | −27.91 (12) | C15—C14—C31—C32 | −99.50 (11) |
| C23—C13—C14—C15 | 152.87 (8) | C13—C14—C31—C36 | −46.76 (11) |
| C12—C13—C14—C31 | 93.88 (10) | C15—C14—C31—C36 | 75.07 (11) |
| C23—C13—C14—C31 | −85.35 (10) | C36—C31—C32—C33 | −0.04 (14) |
| C13—C14—C15—C16 | 28.86 (12) | C14—C31—C32—C33 | 174.69 (9) |
| C31—C14—C15—C16 | −93.78 (10) | C36—C31—C32—N32 | −179.46 (9) |
| C13—C14—C15—C25 | −152.15 (8) | C14—C31—C32—N32 | −4.73 (15) |
| C31—C14—C15—C25 | 85.21 (10) | C33—C32—N32—O32 | 130.11 (10) |
| C25—C15—C16—N11 | 171.13 (9) | C31—C32—N32—O32 | −50.42 (13) |
| C14—C15—C16—N11 | −9.89 (14) | C33—C32—N32—O33 | −48.13 (12) |
| C25—C15—C16—C26 | −7.30 (15) | C31—C32—N32—O33 | 131.33 (10) |
| C14—C15—C16—C26 | 171.68 (9) | C31—C32—C33—C34 | 0.63 (16) |
| C12—N11—C16—C15 | −14.39 (15) | N32—C32—C33—C34 | −179.91 (9) |
| C12—N11—C16—C26 | 164.24 (9) | C32—C33—C34—C35 | −0.67 (16) |
| C12—C13—C23—O24 | 173.91 (11) | C33—C34—C35—C36 | 0.14 (17) |
| C14—C13—C23—O24 | −6.90 (14) | C34—C35—C36—C31 | 0.48 (16) |
| C12—C13—C23—O23 | −6.01 (15) | C32—C31—C36—C35 | −0.51 (14) |
| C14—C13—C23—O23 | 173.19 (8) | C14—C31—C36—C35 | −175.64 (9) |
| O24—C23—O23—C27 | −0.71 (15) | C43i—N41—C42—C43 | −0.10 (19) |
| C13—C23—O23—C27 | 179.21 (9) | C42ii—N41—C42—C43 | −169.14 (10) |
| C16—C15—C25—O26 | 2.38 (16) | N41—C42—C43—N41i | 0.1 (2) |
| H··· | ||||
| N11—H11···O24iii | 0.906 (17) | 1.942 (17) | 2.8444 (12) | 173.6 (15) |
Selected torsion angles (°)
| C12—C13—C14—C31 | 93.88 (10) |
| C31—C14—C15—C16 | −93.78 (10) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N11—H11⋯O24i | 0.906 (17) | 1.942 (17) | 2.8444 (12) | 173.6 (15) |
Symmetry code: (i) .