Literature DB >> 21588942

1-(2-Azido-acet-yl)-3-methyl-2,6-diphenyl-piperidin-4-one.

Haldorai Yuvaraj, S Sundaramoorthy, D Velmurugan, Rajesh G Kalkhambkar.   

Abstract

In the title compound, C(20)H(20)N(4)O(2), the piperidine ring adopts a distorted boat conformation. The two phenyl rings form dihedral angles of 82.87 (1) and 84.40 (1)° with respect to the piperidine ring. The crystal packing is stabilized by inter-molecular C-H⋯O and C-H⋯N inter-actions.

Entities:  

Year:  2010        PMID: 21588942      PMCID: PMC3009351          DOI: 10.1107/S1600536810039097

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of piperidines, see: Aridoss et al. (2008 ▶, 2010 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶); Nardelli (1983 ▶). For related structures, see: Jeyaraman et al. (1999 ▶); Keana & Cai (1990 ▶); Ponnuswamy et al. (2002 ▶).

Experimental

Crystal data

C20H20N4O2 M = 348.40 Monoclinic, a = 11.0418 (3) Å b = 15.7844 (5) Å c = 10.5684 (3) Å β = 108.458 (2)° V = 1747.19 (9) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 292 K 0.25 × 0.23 × 0.2 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.978, T max = 0.983 16435 measured reflections 4286 independent reflections 3147 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.138 S = 1.05 4286 reflections 236 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810039097/bt5365sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810039097/bt5365Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H20N4O2F(000) = 736
Mr = 348.40Dx = 1.324 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1520 reflections
a = 11.0418 (3) Åθ = 1.9–28.5°
b = 15.7844 (5) ŵ = 0.09 mm1
c = 10.5684 (3) ÅT = 292 K
β = 108.458 (2)°Block, colourless
V = 1747.19 (9) Å30.25 × 0.23 × 0.2 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer4286 independent reflections
Radiation source: fine-focus sealed tube3147 reflections with I > 2σ(I)
graphiteRint = 0.026
ω and φ scansθmax = 28.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −14→14
Tmin = 0.978, Tmax = 0.983k = −19→21
16435 measured reflectionsl = −14→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0678P)2 + 0.3241P] where P = (Fo2 + 2Fc2)/3
4286 reflections(Δ/σ)max < 0.001
236 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.59213 (13)0.02968 (9)0.33092 (13)0.0366 (3)
H10.50500.05210.30730.044*
C20.57944 (14)−0.06647 (9)0.32572 (15)0.0411 (3)
H2A0.5489−0.08530.39760.049*
H2B0.5166−0.08270.24210.049*
C30.70355 (14)−0.10988 (9)0.33785 (14)0.0392 (3)
C40.80956 (13)−0.05375 (9)0.32448 (14)0.0386 (3)
H40.8441−0.02280.40870.046*
C50.75819 (13)0.01278 (9)0.21275 (13)0.0360 (3)
H50.7324−0.01820.12810.043*
C60.86401 (14)0.07294 (9)0.20829 (14)0.0387 (3)
C70.92891 (16)0.12263 (10)0.31632 (17)0.0498 (4)
H70.90250.12390.39160.060*
C81.03309 (18)0.17048 (12)0.3130 (2)0.0638 (5)
H81.07640.20340.38630.077*
C91.07271 (18)0.16958 (12)0.2027 (2)0.0661 (5)
H91.14300.20150.20120.079*
C101.00821 (19)0.12146 (13)0.0946 (2)0.0670 (5)
H101.03410.12110.01900.080*
C110.90476 (17)0.07345 (11)0.09768 (17)0.0536 (4)
H110.86170.04080.02380.064*
C120.91822 (16)−0.10347 (11)0.30249 (19)0.0556 (4)
H12A0.9447−0.14710.36880.083*
H12B0.9887−0.06610.30930.083*
H12C0.8903−0.12870.21540.083*
C130.66501 (13)0.06839 (9)0.46567 (14)0.0386 (3)
C140.70059 (15)0.02104 (11)0.58243 (15)0.0489 (4)
H140.6877−0.03730.57830.059*
C150.75481 (18)0.05956 (14)0.70438 (17)0.0639 (5)
H150.77840.02690.78160.077*
C160.77431 (18)0.14548 (15)0.71305 (19)0.0683 (6)
H160.80880.17130.79580.082*
C170.74226 (18)0.19344 (12)0.5977 (2)0.0645 (5)
H170.75720.25150.60250.077*
C180.68785 (16)0.15484 (10)0.47485 (17)0.0506 (4)
H180.66640.18740.39760.061*
C190.56623 (15)0.09208 (9)0.10767 (14)0.0416 (3)
C200.43631 (16)0.12667 (11)0.10659 (16)0.0531 (4)
H20A0.38920.08220.13390.064*
H20B0.44930.17260.17050.064*
N10.64214 (11)0.05607 (7)0.22287 (11)0.0364 (3)
N20.36126 (14)0.15755 (9)−0.02523 (14)0.0570 (4)
N30.38863 (12)0.22845 (9)−0.05698 (13)0.0475 (3)
N40.39979 (17)0.29178 (11)−0.09966 (16)0.0670 (4)
O10.71688 (12)−0.18542 (7)0.35828 (12)0.0547 (3)
O20.59960 (12)0.09701 (8)0.00863 (11)0.0566 (3)
U11U22U33U12U13U23
C10.0380 (7)0.0361 (7)0.0357 (7)0.0033 (5)0.0116 (6)0.0017 (6)
C20.0417 (7)0.0383 (8)0.0434 (8)−0.0047 (6)0.0138 (6)−0.0010 (6)
C30.0512 (8)0.0315 (7)0.0369 (7)0.0001 (6)0.0168 (6)0.0005 (6)
C40.0421 (7)0.0328 (7)0.0418 (8)0.0028 (5)0.0146 (6)0.0015 (6)
C50.0416 (7)0.0327 (7)0.0337 (7)−0.0015 (5)0.0119 (6)−0.0024 (5)
C60.0421 (7)0.0339 (7)0.0391 (7)−0.0004 (5)0.0114 (6)0.0043 (6)
C70.0534 (9)0.0450 (9)0.0493 (9)−0.0079 (7)0.0137 (7)−0.0027 (7)
C80.0559 (10)0.0492 (10)0.0768 (13)−0.0137 (8)0.0077 (9)−0.0012 (9)
C90.0519 (10)0.0532 (10)0.0941 (15)−0.0071 (8)0.0244 (10)0.0206 (10)
C100.0680 (12)0.0710 (13)0.0728 (13)−0.0020 (10)0.0375 (11)0.0185 (10)
C110.0605 (10)0.0582 (10)0.0459 (9)−0.0059 (8)0.0222 (8)0.0021 (7)
C120.0505 (9)0.0487 (9)0.0719 (11)0.0104 (7)0.0254 (9)0.0090 (8)
C130.0379 (7)0.0405 (8)0.0376 (7)0.0066 (5)0.0124 (6)−0.0014 (6)
C140.0516 (9)0.0536 (10)0.0410 (8)0.0025 (7)0.0139 (7)0.0029 (7)
C150.0606 (11)0.0864 (15)0.0393 (9)0.0048 (9)0.0083 (8)0.0006 (9)
C160.0568 (10)0.0925 (16)0.0474 (10)0.0053 (10)0.0049 (8)−0.0255 (10)
C170.0606 (11)0.0529 (10)0.0714 (13)0.0038 (8)0.0087 (9)−0.0231 (9)
C180.0559 (9)0.0409 (8)0.0501 (9)0.0066 (7)0.0099 (7)−0.0051 (7)
C190.0483 (8)0.0361 (7)0.0344 (7)−0.0034 (6)0.0044 (6)−0.0004 (6)
C200.0542 (9)0.0537 (10)0.0445 (9)0.0093 (7)0.0057 (7)0.0037 (7)
N10.0403 (6)0.0343 (6)0.0330 (6)0.0011 (5)0.0093 (5)0.0010 (5)
N20.0614 (8)0.0418 (8)0.0505 (8)0.0023 (6)−0.0070 (7)0.0026 (6)
N30.0451 (7)0.0496 (8)0.0402 (7)0.0029 (6)0.0029 (6)−0.0050 (6)
N40.0798 (11)0.0576 (10)0.0584 (10)−0.0084 (8)0.0145 (8)0.0053 (8)
O10.0714 (8)0.0328 (6)0.0688 (8)0.0034 (5)0.0347 (6)0.0067 (5)
O20.0614 (7)0.0684 (8)0.0369 (6)0.0013 (6)0.0112 (5)0.0091 (5)
C1—N11.4771 (17)C10—H100.9300
C1—C21.5235 (19)C11—H110.9300
C1—C131.5243 (19)C12—H12A0.9600
C1—H10.9800C12—H12B0.9600
C2—C31.501 (2)C12—H12C0.9600
C2—H2A0.9700C13—C181.386 (2)
C2—H2B0.9700C13—C141.389 (2)
C3—O11.2123 (16)C14—C151.379 (2)
C3—C41.510 (2)C14—H140.9300
C4—C121.512 (2)C15—C161.372 (3)
C4—C51.5476 (19)C15—H150.9300
C4—H40.9800C16—C171.383 (3)
C5—N11.4856 (17)C16—H160.9300
C5—C61.5179 (19)C17—C181.387 (2)
C5—H50.9800C17—H170.9300
C6—C111.379 (2)C18—H180.9300
C6—C71.384 (2)C19—O21.2172 (18)
C7—C81.386 (2)C19—N11.3645 (18)
C7—H70.9300C19—C201.532 (2)
C8—C91.369 (3)C20—N21.461 (2)
C8—H80.9300C20—H20A0.9700
C9—C101.369 (3)C20—H20B0.9700
C9—H90.9300N2—N31.233 (2)
C10—C111.380 (3)N3—N41.119 (2)
N1—C1—C2107.80 (11)C10—C11—C6121.20 (17)
N1—C1—C13113.16 (11)C10—C11—H11119.4
C2—C1—C13116.63 (12)C6—C11—H11119.4
N1—C1—H1106.2C4—C12—H12A109.5
C2—C1—H1106.2C4—C12—H12B109.5
C13—C1—H1106.2H12A—C12—H12B109.5
C3—C2—C1112.38 (12)C4—C12—H12C109.5
C3—C2—H2A109.1H12A—C12—H12C109.5
C1—C2—H2A109.1H12B—C12—H12C109.5
C3—C2—H2B109.1C18—C13—C14118.28 (14)
C1—C2—H2B109.1C18—C13—C1119.39 (13)
H2A—C2—H2B107.9C14—C13—C1122.12 (13)
O1—C3—C2121.36 (13)C15—C14—C13120.68 (17)
O1—C3—C4122.66 (13)C15—C14—H14119.7
C2—C3—C4115.97 (11)C13—C14—H14119.7
C3—C4—C12112.72 (12)C16—C15—C14120.73 (18)
C3—C4—C5111.22 (12)C16—C15—H15119.6
C12—C4—C5110.61 (12)C14—C15—H15119.6
C3—C4—H4107.3C15—C16—C17119.44 (17)
C12—C4—H4107.3C15—C16—H16120.3
C5—C4—H4107.3C17—C16—H16120.3
N1—C5—C6113.86 (11)C16—C17—C18119.93 (18)
N1—C5—C4111.92 (10)C16—C17—H17120.0
C6—C5—C4110.39 (11)C18—C17—H17120.0
N1—C5—H5106.7C17—C18—C13120.90 (17)
C6—C5—H5106.7C17—C18—H18119.6
C4—C5—H5106.7C13—C18—H18119.6
C11—C6—C7118.25 (14)O2—C19—N1121.75 (14)
C11—C6—C5119.41 (13)O2—C19—C20120.57 (13)
C7—C6—C5122.12 (13)N1—C19—C20117.68 (13)
C6—C7—C8120.36 (16)N2—C20—C19111.92 (14)
C6—C7—H7119.8N2—C20—H20A109.2
C8—C7—H7119.8C19—C20—H20A109.2
C9—C8—C7120.50 (18)N2—C20—H20B109.2
C9—C8—H8119.8C19—C20—H20B109.2
C7—C8—H8119.8H20A—C20—H20B107.9
C8—C9—C10119.64 (16)C19—N1—C1122.20 (12)
C8—C9—H9120.2C19—N1—C5115.31 (11)
C10—C9—H9120.2C1—N1—C5117.91 (10)
C9—C10—C11120.04 (17)N3—N2—C20116.64 (14)
C9—C10—H10120.0N4—N3—N2171.04 (17)
C11—C10—H10120.0
N1—C1—C2—C357.25 (15)N1—C1—C13—C14−135.96 (14)
C13—C1—C2—C3−71.29 (15)C2—C1—C13—C14−10.06 (19)
C1—C2—C3—O1167.38 (13)C18—C13—C14—C151.3 (2)
C1—C2—C3—C4−12.02 (17)C1—C13—C14—C15−173.35 (14)
O1—C3—C4—C1215.3 (2)C13—C14—C15—C160.3 (3)
C2—C3—C4—C12−165.33 (13)C14—C15—C16—C17−1.7 (3)
O1—C3—C4—C5140.15 (14)C15—C16—C17—C181.6 (3)
C2—C3—C4—C5−40.45 (16)C16—C17—C18—C13−0.1 (3)
C3—C4—C5—N147.54 (15)C14—C13—C18—C17−1.4 (2)
C12—C4—C5—N1173.60 (12)C1—C13—C18—C17173.41 (14)
C3—C4—C5—C6175.48 (11)O2—C19—C20—N24.4 (2)
C12—C4—C5—C6−58.46 (16)N1—C19—C20—N2−175.73 (13)
N1—C5—C6—C11−118.49 (15)O2—C19—N1—C1−163.94 (13)
C4—C5—C6—C11114.64 (15)C20—C19—N1—C116.16 (19)
N1—C5—C6—C767.05 (17)O2—C19—N1—C5−8.5 (2)
C4—C5—C6—C7−59.82 (18)C20—C19—N1—C5171.63 (12)
C11—C6—C7—C8−0.9 (2)C2—C1—N1—C19104.11 (14)
C5—C6—C7—C8173.64 (15)C13—C1—N1—C19−125.40 (13)
C6—C7—C8—C90.4 (3)C2—C1—N1—C5−50.76 (15)
C7—C8—C9—C100.5 (3)C13—C1—N1—C579.74 (14)
C8—C9—C10—C11−0.7 (3)C6—C5—N1—C1976.01 (15)
C9—C10—C11—C60.2 (3)C4—C5—N1—C19−157.92 (12)
C7—C6—C11—C100.6 (2)C6—C5—N1—C1−127.41 (12)
C5—C6—C11—C10−174.06 (16)C4—C5—N1—C1−1.34 (16)
N1—C1—C13—C1849.44 (17)C19—C20—N2—N3−79.48 (19)
C2—C1—C13—C18175.34 (13)
D—H···AD—HH···AD···AD—H···A
C9—H9···O1i0.932.573.464 (2)162
C5—H5···N2ii0.982.523.353 (2)142
C2—H2B···O2ii0.972.563.4933 (19)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9⋯O1i0.932.573.464 (2)162
C5—H5⋯N2ii0.982.523.353 (2)142
C2—H2B⋯O2ii0.972.563.4933 (19)161

Symmetry codes: (i) ; (ii) .

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