| Literature DB >> 21522683 |
Haldorai Yuvaraj, S Sundaramoorthy, D Velmurugan, Rajesh G Kalkhambkar.
Abstract
Mol-ecules of the title compound, C(13)H(13)N(3), are essentially planar (r.m.s. deviation for all non-H atoms = 0.054 Å). The dihedral angle between the two aromatic rings is 6.33 (5)°. In the crystal, pairs of centrosymmetrically related mol-ecules are linked through N-H⋯N hydrogen bonds, forming N-H⋯N dimers with graph-set motif R(2) (2)(8).Entities:
Year: 2010 PMID: 21522683 PMCID: PMC3050141 DOI: 10.1107/S1600536810052372
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H13N3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 715 reflections |
| θ = 2.0–28.4° | |
| µ = 0.08 mm−1 | |
| β = 92.699 (5)° | Block, colourless |
| 0.26 × 0.23 × 0.21 mm | |
| Bruker SMART APEXII area-detector diffractometer | 2850 independent reflections |
| Radiation source: fine-focus sealed tube | 1341 reflections with |
| graphite | |
| ω and φ scans | θmax = 28.4°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 10622 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2850 reflections | Δρmax = 0.14 e Å−3 |
| 147 parameters | Δρmin = −0.11 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.011 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | −0.2431 (4) | 0.01692 (17) | 0.21369 (9) | 0.0756 (5) | |
| H1 | −0.2750 | 0.0866 | 0.1877 | 0.091* | |
| C2 | −0.3858 (4) | −0.00253 (17) | 0.26709 (9) | 0.0797 (5) | |
| H2 | −0.5119 | 0.0548 | 0.2766 | 0.096* | |
| C3 | −0.3465 (3) | −0.10558 (17) | 0.30708 (8) | 0.0712 (5) | |
| C4 | −0.1622 (4) | −0.18826 (18) | 0.29040 (9) | 0.0852 (6) | |
| H4 | −0.1341 | −0.2594 | 0.3156 | 0.102* | |
| C5 | −0.0171 (4) | −0.16896 (18) | 0.23728 (9) | 0.0874 (6) | |
| H5 | 0.1077 | −0.2269 | 0.2276 | 0.105* | |
| C6 | −0.0525 (3) | −0.06569 (15) | 0.19808 (8) | 0.0674 (5) | |
| C7 | −0.5002 (4) | −0.1260 (2) | 0.36606 (9) | 0.0936 (6) | |
| H7A | −0.4823 | −0.2110 | 0.3801 | 0.140* | |
| H7B | −0.6770 | −0.1086 | 0.3553 | 0.140* | |
| H7C | −0.4395 | −0.0714 | 0.4003 | 0.140* | |
| C8 | 0.1072 (3) | −0.04777 (17) | 0.14289 (8) | 0.0731 (5) | |
| H8 | 0.2328 | −0.1063 | 0.1347 | 0.088* | |
| C9 | 0.1978 (3) | 0.15130 (15) | 0.01140 (8) | 0.0662 (5) | |
| C10 | −0.0022 (4) | 0.23520 (18) | 0.01634 (9) | 0.0813 (5) | |
| H10 | −0.1154 | 0.2281 | 0.0496 | 0.098* | |
| C11 | −0.0290 (4) | 0.32800 (19) | −0.02841 (10) | 0.0907 (6) | |
| H11 | −0.1607 | 0.3857 | −0.0258 | 0.109* | |
| C12 | 0.1387 (4) | 0.33637 (19) | −0.07751 (11) | 0.0951 (6) | |
| H12 | 0.1231 | 0.3990 | −0.1087 | 0.114* | |
| C13 | 0.3290 (4) | 0.2497 (2) | −0.07891 (10) | 0.0895 (6) | |
| H13 | 0.4430 | 0.2554 | −0.1121 | 0.107* | |
| N1 | 0.0784 (3) | 0.04629 (14) | 0.10557 (6) | 0.0720 (4) | |
| N2 | 0.2388 (3) | 0.05650 (13) | 0.05528 (6) | 0.0749 (4) | |
| H2A | 0.3623 | 0.0046 | 0.0513 | 0.090* | |
| N3 | 0.3633 (3) | 0.15655 (13) | −0.03568 (7) | 0.0742 (4) |
| C1 | 0.0777 (12) | 0.0642 (10) | 0.0860 (12) | 0.0007 (9) | 0.0162 (9) | 0.0076 (9) |
| C2 | 0.0744 (12) | 0.0739 (12) | 0.0927 (12) | 0.0054 (10) | 0.0244 (10) | 0.0042 (10) |
| C3 | 0.0665 (11) | 0.0751 (11) | 0.0727 (10) | −0.0031 (9) | 0.0112 (8) | 0.0009 (9) |
| C4 | 0.0932 (14) | 0.0836 (13) | 0.0798 (12) | 0.0151 (11) | 0.0158 (10) | 0.0178 (10) |
| C5 | 0.0928 (14) | 0.0874 (13) | 0.0837 (12) | 0.0246 (11) | 0.0219 (11) | 0.0115 (10) |
| C6 | 0.0682 (11) | 0.0661 (10) | 0.0687 (10) | −0.0004 (9) | 0.0094 (8) | −0.0022 (8) |
| C7 | 0.0926 (14) | 0.1023 (15) | 0.0878 (13) | 0.0005 (12) | 0.0244 (11) | 0.0100 (11) |
| C8 | 0.0754 (12) | 0.0720 (11) | 0.0729 (10) | 0.0023 (9) | 0.0137 (9) | −0.0022 (9) |
| C9 | 0.0638 (11) | 0.0657 (11) | 0.0693 (10) | −0.0110 (9) | 0.0067 (8) | −0.0058 (8) |
| C10 | 0.0767 (12) | 0.0795 (12) | 0.0884 (12) | 0.0016 (11) | 0.0117 (10) | −0.0051 (11) |
| C11 | 0.0797 (14) | 0.0773 (13) | 0.1152 (16) | 0.0026 (10) | 0.0057 (12) | 0.0009 (12) |
| C12 | 0.0857 (15) | 0.0804 (13) | 0.1190 (16) | −0.0064 (12) | 0.0035 (13) | 0.0221 (12) |
| C13 | 0.0778 (13) | 0.0941 (14) | 0.0976 (14) | −0.0129 (12) | 0.0151 (10) | 0.0157 (12) |
| N1 | 0.0709 (9) | 0.0764 (10) | 0.0699 (8) | −0.0061 (7) | 0.0162 (7) | −0.0064 (8) |
| N2 | 0.0737 (10) | 0.0783 (10) | 0.0741 (9) | 0.0027 (8) | 0.0191 (7) | 0.0002 (8) |
| N3 | 0.0671 (9) | 0.0762 (10) | 0.0801 (9) | −0.0092 (7) | 0.0115 (8) | 0.0036 (8) |
| C1—C2 | 1.374 (2) | C8—N1 | 1.273 (2) |
| C1—C6 | 1.383 (2) | C8—H8 | 0.9300 |
| C1—H1 | 0.9300 | C9—N3 | 1.332 (2) |
| C2—C3 | 1.387 (2) | C9—N2 | 1.370 (2) |
| C2—H2 | 0.9300 | C9—C10 | 1.388 (2) |
| C3—C4 | 1.366 (2) | C10—C11 | 1.359 (2) |
| C3—C7 | 1.504 (2) | C10—H10 | 0.9300 |
| C4—C5 | 1.377 (3) | C11—C12 | 1.373 (3) |
| C4—H4 | 0.9300 | C11—H11 | 0.9300 |
| C5—C6 | 1.378 (2) | C12—C13 | 1.364 (3) |
| C5—H5 | 0.9300 | C12—H12 | 0.9300 |
| C6—C8 | 1.455 (2) | C13—N3 | 1.344 (2) |
| C7—H7A | 0.9600 | C13—H13 | 0.9300 |
| C7—H7B | 0.9600 | N1—N2 | 1.3680 (17) |
| C7—H7C | 0.9600 | N2—H2A | 0.8600 |
| C2—C1—C6 | 120.95 (17) | N1—C8—C6 | 121.34 (17) |
| C2—C1—H1 | 119.5 | N1—C8—H8 | 119.3 |
| C6—C1—H1 | 119.5 | C6—C8—H8 | 119.3 |
| C1—C2—C3 | 121.63 (17) | N3—C9—N2 | 115.09 (16) |
| C1—C2—H2 | 119.2 | N3—C9—C10 | 123.05 (17) |
| C3—C2—H2 | 119.2 | N2—C9—C10 | 121.86 (17) |
| C4—C3—C2 | 117.02 (16) | C11—C10—C9 | 118.63 (18) |
| C4—C3—C7 | 121.33 (17) | C11—C10—H10 | 120.7 |
| C2—C3—C7 | 121.65 (17) | C9—C10—H10 | 120.7 |
| C3—C4—C5 | 121.69 (18) | C10—C11—C12 | 119.8 (2) |
| C3—C4—H4 | 119.2 | C10—C11—H11 | 120.1 |
| C5—C4—H4 | 119.2 | C12—C11—H11 | 120.1 |
| C4—C5—C6 | 121.46 (18) | C13—C12—C11 | 117.68 (19) |
| C4—C5—H5 | 119.3 | C13—C12—H12 | 121.2 |
| C6—C5—H5 | 119.3 | C11—C12—H12 | 121.2 |
| C5—C6—C1 | 117.22 (16) | N3—C13—C12 | 124.55 (19) |
| C5—C6—C8 | 119.79 (16) | N3—C13—H13 | 117.7 |
| C1—C6—C8 | 122.99 (16) | C12—C13—H13 | 117.7 |
| C3—C7—H7A | 109.5 | C8—N1—N2 | 117.46 (15) |
| C3—C7—H7B | 109.5 | N1—N2—C9 | 118.41 (15) |
| H7A—C7—H7B | 109.5 | N1—N2—H2A | 120.8 |
| C3—C7—H7C | 109.5 | C9—N2—H2A | 120.8 |
| H7A—C7—H7C | 109.5 | C9—N3—C13 | 116.24 (17) |
| H7B—C7—H7C | 109.5 | ||
| C6—C1—C2—C3 | −0.5 (3) | N3—C9—C10—C11 | −0.8 (3) |
| C1—C2—C3—C4 | −1.1 (3) | N2—C9—C10—C11 | 179.07 (15) |
| C1—C2—C3—C7 | 179.13 (16) | C9—C10—C11—C12 | 0.6 (3) |
| C2—C3—C4—C5 | 1.6 (3) | C10—C11—C12—C13 | −0.3 (3) |
| C7—C3—C4—C5 | −178.62 (18) | C11—C12—C13—N3 | 0.2 (3) |
| C3—C4—C5—C6 | −0.6 (3) | C6—C8—N1—N2 | 179.29 (13) |
| C4—C5—C6—C1 | −1.0 (3) | C8—N1—N2—C9 | 174.71 (14) |
| C4—C5—C6—C8 | 179.16 (17) | N3—C9—N2—N1 | 179.08 (13) |
| C2—C1—C6—C5 | 1.5 (3) | C10—C9—N2—N1 | −0.8 (2) |
| C2—C1—C6—C8 | −178.67 (16) | N2—C9—N3—C13 | −179.22 (14) |
| C5—C6—C8—N1 | 179.65 (16) | C10—C9—N3—C13 | 0.7 (2) |
| C1—C6—C8—N1 | −0.2 (3) | C12—C13—N3—C9 | −0.3 (3) |
| H··· | ||||
| N2—H2A···N3i | 0.86 | 2.28 | 3.131 (2) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.28 | 3.131 (2) | 170 |
Symmetry code: (i) .