| Literature DB >> 21588932 |
Jiankang Zhang1, Xiaofen Qin, Xingqin Zhou.
Abstract
In the title compound, C(29)H(23)N(3), the pyrimidine ring adopts an envelope conformation. The dihedral angle between the phenyl rings attached to the pyrimidine-ring double bond is 62.09 (7)°. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds, forming extended chains in the c-axis direction.Entities:
Year: 2010 PMID: 21588932 PMCID: PMC3009266 DOI: 10.1107/S1600536810038961
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C29H23N3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2039 reflections |
| θ = 2.6–23.2° | |
| µ = 0.08 mm−1 | |
| β = 91.810 (4)° | Block, yellow |
| 0.44 × 0.42 × 0.33 mm | |
| Bruker SMART CCD area-detector diffractometer | 3819 independent reflections |
| Radiation source: fine-focus sealed tube | 2071 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 11276 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3819 reflections | (Δ/σ)max < 0.001 |
| 289 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.14553 (14) | 0.83172 (18) | 0.85068 (18) | 0.0517 (6) | |
| H1A | 0.1495 | 0.8943 | 0.8910 | 0.062* | |
| N2 | 0.21849 (13) | 0.69225 (17) | 0.74512 (16) | 0.0418 (5) | |
| N3 | 0.16675 (13) | 0.59511 (17) | 0.59709 (16) | 0.0429 (5) | |
| C1 | 0.21383 (16) | 0.7487 (2) | 0.8563 (2) | 0.0442 (6) | |
| H1 | 0.2657 | 0.7927 | 0.8704 | 0.053* | |
| C2 | 0.28310 (15) | 0.6234 (2) | 0.7078 (2) | 0.0421 (6) | |
| C3 | 0.24973 (16) | 0.5649 (2) | 0.6166 (2) | 0.0423 (6) | |
| C4 | 0.15000 (16) | 0.6717 (2) | 0.67723 (19) | 0.0405 (6) | |
| C5 | 0.07381 (16) | 0.7354 (2) | 0.6952 (2) | 0.0422 (6) | |
| C6 | 0.00388 (17) | 0.7246 (2) | 0.6248 (2) | 0.0513 (7) | |
| H6 | 0.0039 | 0.6710 | 0.5658 | 0.062* | |
| C7 | −0.06578 (18) | 0.7928 (3) | 0.6415 (3) | 0.0618 (8) | |
| H7 | −0.1127 | 0.7855 | 0.5939 | 0.074* | |
| C8 | −0.06544 (19) | 0.8721 (3) | 0.7295 (3) | 0.0640 (8) | |
| H8 | −0.1124 | 0.9181 | 0.7407 | 0.077* | |
| C9 | 0.00313 (19) | 0.8838 (2) | 0.8003 (2) | 0.0576 (8) | |
| H9 | 0.0024 | 0.9371 | 0.8594 | 0.069* | |
| C10 | 0.07411 (17) | 0.8157 (2) | 0.7839 (2) | 0.0455 (7) | |
| C11 | 0.20700 (16) | 0.6564 (2) | 0.9477 (2) | 0.0435 (6) | |
| C12 | 0.13376 (18) | 0.5960 (2) | 0.9621 (2) | 0.0557 (7) | |
| H12 | 0.0878 | 0.6108 | 0.9144 | 0.067* | |
| C13 | 0.1277 (2) | 0.5138 (2) | 1.0465 (2) | 0.0653 (8) | |
| H13 | 0.0775 | 0.4742 | 1.0552 | 0.078* | |
| C14 | 0.1946 (2) | 0.4892 (2) | 1.1179 (2) | 0.0602 (8) | |
| C15 | 0.2675 (2) | 0.5504 (3) | 1.1031 (2) | 0.0650 (8) | |
| H15 | 0.3134 | 0.5355 | 1.1508 | 0.078* | |
| C16 | 0.27413 (18) | 0.6330 (2) | 1.0196 (2) | 0.0557 (7) | |
| H16 | 0.3242 | 0.6732 | 1.0116 | 0.067* | |
| C17 | 0.1870 (3) | 0.4005 (3) | 1.2109 (3) | 0.0974 (13) | |
| H17A | 0.1699 | 0.4394 | 1.2779 | 0.146* | |
| H17B | 0.2401 | 0.3631 | 1.2249 | 0.146* | |
| H17C | 0.1461 | 0.3424 | 1.1890 | 0.146* | |
| C18 | 0.36672 (16) | 0.6215 (2) | 0.7620 (2) | 0.0451 (6) | |
| C19 | 0.41102 (18) | 0.7239 (3) | 0.7841 (2) | 0.0558 (7) | |
| H19 | 0.3885 | 0.7957 | 0.7613 | 0.067* | |
| C20 | 0.48788 (19) | 0.7208 (3) | 0.8393 (3) | 0.0666 (9) | |
| H20 | 0.5163 | 0.7904 | 0.8552 | 0.080* | |
| C21 | 0.5223 (2) | 0.6158 (3) | 0.8708 (3) | 0.0735 (10) | |
| H21 | 0.5742 | 0.6137 | 0.9083 | 0.088* | |
| C22 | 0.48048 (19) | 0.5135 (3) | 0.8470 (3) | 0.0669 (9) | |
| H22 | 0.5046 | 0.4419 | 0.8673 | 0.080* | |
| C23 | 0.40312 (17) | 0.5155 (3) | 0.7934 (2) | 0.0559 (7) | |
| H23 | 0.3751 | 0.4454 | 0.7781 | 0.067* | |
| C24 | 0.29181 (16) | 0.4794 (2) | 0.5439 (2) | 0.0442 (6) | |
| C25 | 0.25755 (18) | 0.3695 (2) | 0.5252 (2) | 0.0576 (8) | |
| H25 | 0.2068 | 0.3504 | 0.5563 | 0.069* | |
| C26 | 0.2981 (2) | 0.2877 (3) | 0.4605 (3) | 0.0681 (9) | |
| H26 | 0.2755 | 0.2131 | 0.4501 | 0.082* | |
| C27 | 0.3716 (2) | 0.3166 (3) | 0.4118 (3) | 0.0672 (9) | |
| H27 | 0.3985 | 0.2619 | 0.3677 | 0.081* | |
| C28 | 0.40545 (19) | 0.4259 (3) | 0.4280 (2) | 0.0649 (8) | |
| H28 | 0.4551 | 0.4457 | 0.3942 | 0.078* | |
| C29 | 0.36592 (17) | 0.5066 (2) | 0.4945 (2) | 0.0551 (7) | |
| H29 | 0.3897 | 0.5804 | 0.5061 | 0.066* |
| N1 | 0.0703 (16) | 0.0421 (13) | 0.0425 (13) | 0.0085 (11) | 0.0006 (12) | −0.0063 (10) |
| N2 | 0.0491 (13) | 0.0440 (12) | 0.0324 (11) | 0.0006 (10) | 0.0024 (10) | 0.0010 (9) |
| N3 | 0.0507 (14) | 0.0441 (12) | 0.0340 (12) | 0.0021 (10) | 0.0050 (10) | 0.0018 (10) |
| C1 | 0.0535 (16) | 0.0445 (15) | 0.0346 (14) | −0.0002 (12) | 0.0033 (12) | −0.0062 (11) |
| C2 | 0.0477 (15) | 0.0454 (15) | 0.0334 (14) | 0.0028 (12) | 0.0050 (12) | 0.0000 (12) |
| C3 | 0.0496 (16) | 0.0445 (15) | 0.0329 (14) | 0.0021 (12) | 0.0036 (12) | 0.0033 (11) |
| C4 | 0.0503 (16) | 0.0407 (14) | 0.0305 (13) | −0.0015 (12) | 0.0033 (12) | 0.0042 (11) |
| C5 | 0.0512 (16) | 0.0418 (15) | 0.0339 (14) | 0.0035 (12) | 0.0053 (12) | 0.0050 (11) |
| C6 | 0.0566 (18) | 0.0525 (17) | 0.0451 (16) | 0.0021 (14) | 0.0042 (14) | 0.0006 (13) |
| C7 | 0.0556 (19) | 0.068 (2) | 0.062 (2) | 0.0059 (15) | −0.0002 (15) | 0.0038 (16) |
| C8 | 0.063 (2) | 0.064 (2) | 0.066 (2) | 0.0167 (16) | 0.0109 (17) | 0.0087 (17) |
| C9 | 0.075 (2) | 0.0488 (17) | 0.0493 (17) | 0.0156 (15) | 0.0106 (16) | 0.0018 (13) |
| C10 | 0.0578 (17) | 0.0447 (16) | 0.0344 (14) | 0.0039 (13) | 0.0066 (13) | 0.0068 (12) |
| C11 | 0.0543 (17) | 0.0443 (15) | 0.0320 (14) | 0.0011 (13) | 0.0039 (12) | −0.0035 (11) |
| C12 | 0.0635 (19) | 0.0603 (19) | 0.0433 (16) | −0.0044 (15) | 0.0001 (14) | 0.0024 (14) |
| C13 | 0.086 (2) | 0.0592 (19) | 0.0513 (18) | −0.0121 (16) | 0.0100 (17) | 0.0038 (15) |
| C14 | 0.094 (2) | 0.0461 (17) | 0.0404 (17) | 0.0115 (17) | 0.0076 (17) | 0.0023 (13) |
| C15 | 0.081 (2) | 0.067 (2) | 0.0462 (18) | 0.0185 (18) | −0.0051 (16) | 0.0047 (15) |
| C16 | 0.0615 (19) | 0.0587 (18) | 0.0466 (17) | 0.0031 (14) | −0.0012 (14) | −0.0018 (14) |
| C17 | 0.170 (4) | 0.064 (2) | 0.060 (2) | 0.014 (2) | 0.019 (2) | 0.0197 (17) |
| C18 | 0.0500 (16) | 0.0529 (17) | 0.0327 (14) | 0.0012 (13) | 0.0044 (12) | 0.0007 (12) |
| C19 | 0.0572 (18) | 0.0603 (19) | 0.0500 (17) | −0.0040 (15) | 0.0028 (14) | 0.0028 (14) |
| C20 | 0.057 (2) | 0.081 (2) | 0.062 (2) | −0.0118 (17) | 0.0015 (16) | −0.0113 (17) |
| C21 | 0.0548 (19) | 0.104 (3) | 0.061 (2) | 0.008 (2) | −0.0094 (16) | −0.0104 (19) |
| C22 | 0.064 (2) | 0.075 (2) | 0.061 (2) | 0.0153 (17) | −0.0085 (16) | −0.0006 (17) |
| C23 | 0.0582 (19) | 0.0602 (19) | 0.0491 (17) | 0.0064 (15) | −0.0012 (14) | −0.0014 (14) |
| C24 | 0.0511 (16) | 0.0485 (16) | 0.0329 (14) | 0.0051 (13) | 0.0009 (12) | 0.0003 (12) |
| C25 | 0.0598 (18) | 0.0563 (18) | 0.0571 (18) | −0.0021 (14) | 0.0085 (15) | −0.0087 (14) |
| C26 | 0.078 (2) | 0.0559 (19) | 0.071 (2) | 0.0020 (16) | 0.0070 (19) | −0.0143 (16) |
| C27 | 0.070 (2) | 0.072 (2) | 0.059 (2) | 0.0176 (18) | 0.0056 (17) | −0.0183 (16) |
| C28 | 0.0555 (18) | 0.082 (2) | 0.0580 (19) | 0.0029 (17) | 0.0165 (15) | −0.0093 (17) |
| C29 | 0.0583 (19) | 0.0591 (18) | 0.0484 (17) | −0.0034 (14) | 0.0104 (15) | −0.0071 (14) |
| N1—C10 | 1.384 (3) | C14—C15 | 1.374 (4) |
| N1—C1 | 1.445 (3) | C14—C17 | 1.506 (4) |
| N1—H1A | 0.8600 | C15—C16 | 1.375 (4) |
| N2—C4 | 1.362 (3) | C15—H15 | 0.9300 |
| N2—C2 | 1.382 (3) | C16—H16 | 0.9300 |
| N2—C1 | 1.475 (3) | C17—H17A | 0.9600 |
| N3—C4 | 1.326 (3) | C17—H17B | 0.9600 |
| N3—C3 | 1.384 (3) | C17—H17C | 0.9600 |
| C1—C11 | 1.519 (3) | C18—C23 | 1.387 (3) |
| C1—H1 | 0.9800 | C18—C19 | 1.385 (4) |
| C2—C3 | 1.368 (3) | C19—C20 | 1.377 (4) |
| C2—C18 | 1.468 (3) | C19—H19 | 0.9300 |
| C3—C24 | 1.478 (3) | C20—C21 | 1.365 (4) |
| C4—C5 | 1.440 (3) | C20—H20 | 0.9300 |
| C5—C6 | 1.383 (3) | C21—C22 | 1.368 (4) |
| C5—C10 | 1.396 (3) | C21—H21 | 0.9300 |
| C6—C7 | 1.378 (4) | C22—C23 | 1.375 (4) |
| C6—H6 | 0.9300 | C22—H22 | 0.9300 |
| C7—C8 | 1.382 (4) | C23—H23 | 0.9300 |
| C7—H7 | 0.9300 | C24—C29 | 1.376 (3) |
| C8—C9 | 1.369 (4) | C24—C25 | 1.381 (4) |
| C8—H8 | 0.9300 | C25—C26 | 1.384 (4) |
| C9—C10 | 1.394 (4) | C25—H25 | 0.9300 |
| C9—H9 | 0.9300 | C26—C27 | 1.366 (4) |
| C11—C12 | 1.374 (4) | C26—H26 | 0.9300 |
| C11—C16 | 1.379 (3) | C27—C28 | 1.368 (4) |
| C12—C13 | 1.379 (4) | C27—H27 | 0.9300 |
| C12—H12 | 0.9300 | C28—C29 | 1.380 (4) |
| C13—C14 | 1.374 (4) | C28—H28 | 0.9300 |
| C13—H13 | 0.9300 | C29—H29 | 0.9300 |
| C10—N1—C1 | 123.4 (2) | C15—C14—C17 | 121.5 (3) |
| C10—N1—H1A | 118.3 | C13—C14—C17 | 120.8 (3) |
| C1—N1—H1A | 118.3 | C14—C15—C16 | 121.6 (3) |
| C4—N2—C2 | 108.0 (2) | C14—C15—H15 | 119.2 |
| C4—N2—C1 | 123.0 (2) | C16—C15—H15 | 119.2 |
| C2—N2—C1 | 126.5 (2) | C15—C16—C11 | 120.3 (3) |
| C4—N3—C3 | 104.9 (2) | C15—C16—H16 | 119.8 |
| N1—C1—N2 | 107.7 (2) | C11—C16—H16 | 119.8 |
| N1—C1—C11 | 114.4 (2) | C14—C17—H17A | 109.5 |
| N2—C1—C11 | 110.40 (19) | C14—C17—H17B | 109.5 |
| N1—C1—H1 | 108.1 | H17A—C17—H17B | 109.5 |
| N2—C1—H1 | 108.1 | C14—C17—H17C | 109.5 |
| C11—C1—H1 | 108.1 | H17A—C17—H17C | 109.5 |
| C3—C2—N2 | 104.7 (2) | H17B—C17—H17C | 109.5 |
| C3—C2—C18 | 132.0 (2) | C23—C18—C19 | 118.2 (3) |
| N2—C2—C18 | 123.2 (2) | C23—C18—C2 | 120.0 (2) |
| C2—C3—N3 | 111.1 (2) | C19—C18—C2 | 121.7 (2) |
| C2—C3—C24 | 127.7 (2) | C20—C19—C18 | 120.9 (3) |
| N3—C3—C24 | 121.2 (2) | C20—C19—H19 | 119.5 |
| N3—C4—N2 | 111.3 (2) | C18—C19—H19 | 119.5 |
| N3—C4—C5 | 129.0 (2) | C21—C20—C19 | 120.0 (3) |
| N2—C4—C5 | 119.7 (2) | C21—C20—H20 | 120.0 |
| C6—C5—C10 | 120.0 (2) | C19—C20—H20 | 120.0 |
| C6—C5—C4 | 122.5 (2) | C22—C21—C20 | 119.9 (3) |
| C10—C5—C4 | 117.4 (2) | C22—C21—H21 | 120.1 |
| C7—C6—C5 | 120.4 (3) | C20—C21—H21 | 120.1 |
| C7—C6—H6 | 119.8 | C21—C22—C23 | 120.7 (3) |
| C5—C6—H6 | 119.8 | C21—C22—H22 | 119.7 |
| C6—C7—C8 | 119.5 (3) | C23—C22—H22 | 119.7 |
| C6—C7—H7 | 120.2 | C22—C23—C18 | 120.2 (3) |
| C8—C7—H7 | 120.2 | C22—C23—H23 | 119.9 |
| C9—C8—C7 | 120.9 (3) | C18—C23—H23 | 119.9 |
| C9—C8—H8 | 119.5 | C29—C24—C25 | 118.6 (2) |
| C7—C8—H8 | 119.5 | C29—C24—C3 | 121.1 (2) |
| C8—C9—C10 | 120.0 (3) | C25—C24—C3 | 120.3 (2) |
| C8—C9—H9 | 120.0 | C24—C25—C26 | 120.6 (3) |
| C10—C9—H9 | 120.0 | C24—C25—H25 | 119.7 |
| N1—C10—C5 | 120.2 (2) | C26—C25—H25 | 119.7 |
| N1—C10—C9 | 120.6 (2) | C27—C26—C25 | 119.9 (3) |
| C5—C10—C9 | 119.1 (3) | C27—C26—H26 | 120.0 |
| C12—C11—C16 | 118.5 (2) | C25—C26—H26 | 120.0 |
| C12—C11—C1 | 121.1 (2) | C26—C27—C28 | 120.1 (3) |
| C16—C11—C1 | 120.4 (2) | C26—C27—H27 | 119.9 |
| C11—C12—C13 | 120.6 (3) | C28—C27—H27 | 119.9 |
| C11—C12—H12 | 119.7 | C27—C28—C29 | 120.0 (3) |
| C13—C12—H12 | 119.7 | C27—C28—H28 | 120.0 |
| C14—C13—C12 | 121.2 (3) | C29—C28—H28 | 120.0 |
| C14—C13—H13 | 119.4 | C24—C29—C28 | 120.8 (3) |
| C12—C13—H13 | 119.4 | C24—C29—H29 | 119.6 |
| C15—C14—C13 | 117.7 (3) | C28—C29—H29 | 119.6 |
| C10—N1—C1—N2 | 31.9 (3) | N1—C1—C11—C12 | 47.4 (3) |
| C10—N1—C1—C11 | −91.3 (3) | N2—C1—C11—C12 | −74.2 (3) |
| C4—N2—C1—N1 | −32.5 (3) | N1—C1—C11—C16 | −131.4 (3) |
| C2—N2—C1—N1 | 167.7 (2) | N2—C1—C11—C16 | 106.9 (3) |
| C4—N2—C1—C11 | 93.1 (3) | C16—C11—C12—C13 | −0.1 (4) |
| C2—N2—C1—C11 | −66.8 (3) | C1—C11—C12—C13 | −179.0 (2) |
| C4—N2—C2—C3 | 0.7 (3) | C11—C12—C13—C14 | −0.5 (4) |
| C1—N2—C2—C3 | 163.1 (2) | C12—C13—C14—C15 | 0.7 (4) |
| C4—N2—C2—C18 | −179.2 (2) | C12—C13—C14—C17 | 179.1 (3) |
| C1—N2—C2—C18 | −16.9 (4) | C13—C14—C15—C16 | −0.4 (4) |
| N2—C2—C3—N3 | −0.3 (3) | C17—C14—C15—C16 | −178.8 (3) |
| C18—C2—C3—N3 | 179.7 (2) | C14—C15—C16—C11 | −0.2 (4) |
| N2—C2—C3—C24 | 179.8 (2) | C12—C11—C16—C15 | 0.4 (4) |
| C18—C2—C3—C24 | −0.3 (5) | C1—C11—C16—C15 | 179.3 (2) |
| C4—N3—C3—C2 | −0.3 (3) | C3—C2—C18—C23 | −52.0 (4) |
| C4—N3—C3—C24 | 179.7 (2) | N2—C2—C18—C23 | 127.9 (3) |
| C3—N3—C4—N2 | 0.8 (3) | C3—C2—C18—C19 | 128.5 (3) |
| C3—N3—C4—C5 | 177.5 (2) | N2—C2—C18—C19 | −51.6 (4) |
| C2—N2—C4—N3 | −1.0 (3) | C23—C18—C19—C20 | −2.3 (4) |
| C1—N2—C4—N3 | −164.1 (2) | C2—C18—C19—C20 | 177.2 (2) |
| C2—N2—C4—C5 | −178.0 (2) | C18—C19—C20—C21 | 1.5 (4) |
| C1—N2—C4—C5 | 18.9 (3) | C19—C20—C21—C22 | 0.2 (5) |
| N3—C4—C5—C6 | −0.9 (4) | C20—C21—C22—C23 | −1.2 (5) |
| N2—C4—C5—C6 | 175.5 (2) | C21—C22—C23—C18 | 0.4 (5) |
| N3—C4—C5—C10 | −177.0 (2) | C19—C18—C23—C22 | 1.3 (4) |
| N2—C4—C5—C10 | −0.5 (3) | C2—C18—C23—C22 | −178.2 (3) |
| C10—C5—C6—C7 | 0.0 (4) | C2—C3—C24—C29 | −53.1 (4) |
| C4—C5—C6—C7 | −176.0 (2) | N3—C3—C24—C29 | 127.0 (3) |
| C5—C6—C7—C8 | −0.1 (4) | C2—C3—C24—C25 | 126.2 (3) |
| C6—C7—C8—C9 | −0.1 (4) | N3—C3—C24—C25 | −53.7 (3) |
| C7—C8—C9—C10 | 0.4 (4) | C29—C24—C25—C26 | 1.7 (4) |
| C1—N1—C10—C5 | −17.9 (4) | C3—C24—C25—C26 | −177.7 (3) |
| C1—N1—C10—C9 | 165.5 (2) | C24—C25—C26—C27 | −1.9 (4) |
| C6—C5—C10—N1 | −176.3 (2) | C25—C26—C27—C28 | 0.7 (5) |
| C4—C5—C10—N1 | −0.2 (3) | C26—C27—C28—C29 | 0.7 (5) |
| C6—C5—C10—C9 | 0.4 (4) | C25—C24—C29—C28 | −0.2 (4) |
| C4—C5—C10—C9 | 176.5 (2) | C3—C24—C29—C28 | 179.1 (2) |
| C8—C9—C10—N1 | 176.1 (2) | C27—C28—C29—C24 | −0.9 (4) |
| C8—C9—C10—C5 | −0.5 (4) |
| H··· | ||||
| N1—H1A···N3i | 0.86 | 2.46 | 3.058 (3) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.46 | 3.058 (3) | 127 |
Symmetry code: (i) .