Literature DB >> 21588918

2-{[(E)-2-Hy-droxy-benzyl-idene]amino}-1H-isoindole-1,3(2H)-dione.

H C Devarajegowda, H D Revanasiddappa, L Shiva Kumar, V Sumangala, V D Jagadeesh Prasad.   

Abstract

In the title compound, C(15)H(10)N(2)O(3), the n class="Chemical">isoindoline ring system is almost planar [maximum deviation = 0.020 (2) Å] and makes a dihedral angle of 1.57 (7)° with the benzene ring. Intra-molecular O-H⋯N and C-H⋯O hydrogen bonds are observed.

Entities:  

Year:  2010        PMID: 21588918      PMCID: PMC3009371          DOI: 10.1107/S1600536810038407

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Based on the multiple binding sites of acetyl­cholinesterase (AChE), a series of AChE inhibitors involving phthalimide derivatives have been designed and synthesized, see: Zhao et al. (2009 ▶). n class="Chemical">Phthalimide derivatives have also been developed as LXRa-selective antagonists, see: Motoshima et al. (2009 ▶). For the biological activity of Schiff bases, see: Singh et al. (2006 ▶); Sithambaram et al. (2006 ▶); Walsh et al. (1996 ▶). For a related structure, see: Jing et al. (2007 ▶).

Experimental

Crystal data

C15H10N2O3 M = 266.25 Monoclinic, a = 7.0877 (2) Å b = 8.2400 (4) Å c = 21.2752 (7) Å β = 92.659 (3)° V = 1241.19 (8) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.22 × 0.15 × 0.12 mm

Data collection

Bruker SMART CCD n class="Chemical">area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.982, T max = 0.988 11806 measured reflections 2184 independent reflections 1541 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.098 S = 1.10 2184 reflections 182 parameters H-atom parameters constrained Δρmax = 0.10 e Å−3 Δρmin = −0.11 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); moleculn class="Chemical">ar graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810038407/wn2411sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810038407/wn2411Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10N2O3F(000) = 552
Mr = 266.25Dx = 1.425 Mg m3
Monoclinic, P21/cMelting point: 465 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 7.0877 (2) ÅCell parameters from 2184 reflections
b = 8.2400 (4) Åθ = 2.7–25.0°
c = 21.2752 (7) ŵ = 0.10 mm1
β = 92.659 (3)°T = 293 K
V = 1241.19 (8) Å3Plate, yellow
Z = 40.22 × 0.15 × 0.12 mm
Bruker SMART CCD area-detector diffractometer2184 independent reflections
Radiation source: fine-focus sealed tube1541 reflections with I > 2σ(I)
graphiteRint = 0.023
ω and φ scansθmax = 25.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −8→8
Tmin = 0.982, Tmax = 0.988k = −9→9
11806 measured reflectionsl = −25→25
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.098w = 1/[σ2(Fo2) + (0.0449P)2 + 0.0801P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
2184 reflectionsΔρmax = 0.10 e Å3
182 parametersΔρmin = −0.11 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0088 (16)
Experimental. IR ν(Nujolmull, cm-1): 1768 and 1725 (C=O), 1617 (HC=N), 3386 (Ph—OH). 1H NMR (DMSO-d6, p.p.m.): 10.67 (s, 1H, Ph—OH), 9.45 (s, 1H, HC=N), 6.92–7.91 (m, 4H, Ar—H). FAB-MS: m/z = 267 [M+1]+, Anal. Calc. for C15H10N2O3; C, 67.67; H, 3.79; N, 10.52; O, 18.03; Found: C, 67.05; H, 3.81; N, 10.68; O, 17.98,; Electronic spectra: 289 nm and 334 nm.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O3−0.27271 (15)0.27296 (16)0.07498 (5)0.0836 (4)
O40.28488 (17)0.31121 (18)−0.02433 (5)0.0877 (4)
O50.00226 (15)0.52524 (17)0.19986 (5)0.0846 (4)
H5−0.01940.47520.16700.127*
N10.02621 (17)0.31346 (16)0.03847 (5)0.0579 (4)
N20.08319 (18)0.40089 (16)0.09127 (5)0.0591 (4)
C1−0.3130 (3)0.0248 (2)−0.11364 (9)0.0780 (5)
H1−0.4146−0.0282−0.13380.094*
C2−0.1434 (3)0.0318 (2)−0.14198 (8)0.0798 (5)
H2−0.1320−0.0162−0.18120.096*
C30.0112 (3)0.1090 (2)−0.11336 (8)0.0739 (5)
H30.12620.1138−0.13270.089*
C4−0.0109 (2)0.1786 (2)−0.05531 (7)0.0580 (4)
C5−0.1815 (2)0.1703 (2)−0.02662 (7)0.0578 (4)
C6−0.3351 (2)0.0955 (2)−0.05535 (8)0.0716 (5)
H6−0.45060.0923−0.03630.086*
C70.1244 (2)0.2722 (2)−0.01510 (7)0.0614 (4)
C8−0.1610 (2)0.2551 (2)0.03459 (7)0.0607 (4)
C90.2541 (2)0.4496 (2)0.09978 (7)0.0610 (4)
H90.34220.42660.07000.073*
C100.3099 (2)0.54030 (19)0.15573 (7)0.0557 (4)
C110.4953 (2)0.5961 (2)0.16350 (8)0.0700 (5)
H110.57980.57480.13240.084*
C120.5558 (3)0.6816 (2)0.21590 (9)0.0783 (5)
H120.68010.71760.22040.094*
C130.4304 (3)0.7134 (2)0.26175 (9)0.0781 (5)
H130.47050.77200.29730.094*
C140.2476 (3)0.6602 (2)0.25587 (8)0.0741 (5)
H140.16480.68230.28740.089*
C150.1854 (2)0.5737 (2)0.20321 (8)0.0610 (4)
U11U22U33U12U13U23
O30.0731 (8)0.1092 (11)0.0704 (7)−0.0031 (7)0.0216 (6)−0.0101 (7)
O40.0713 (8)0.1189 (12)0.0746 (8)−0.0043 (7)0.0206 (6)−0.0070 (7)
O50.0675 (8)0.1089 (11)0.0789 (8)−0.0129 (7)0.0191 (6)−0.0184 (7)
N10.0613 (8)0.0631 (9)0.0498 (7)0.0052 (6)0.0078 (6)0.0018 (7)
N20.0640 (9)0.0584 (9)0.0550 (8)0.0062 (7)0.0045 (6)0.0027 (6)
C10.0967 (14)0.0658 (13)0.0705 (11)0.0020 (10)−0.0077 (10)−0.0015 (10)
C20.1067 (15)0.0726 (14)0.0597 (10)0.0146 (11)0.0006 (10)−0.0049 (9)
C30.0871 (12)0.0750 (13)0.0606 (10)0.0132 (10)0.0139 (9)0.0029 (9)
C40.0706 (10)0.0528 (10)0.0510 (8)0.0114 (8)0.0071 (7)0.0108 (8)
C50.0692 (10)0.0525 (10)0.0520 (8)0.0090 (8)0.0047 (7)0.0111 (7)
C60.0745 (11)0.0693 (12)0.0711 (11)0.0009 (9)0.0043 (9)0.0073 (10)
C70.0654 (10)0.0640 (12)0.0558 (9)0.0106 (9)0.0127 (8)0.0093 (8)
C80.0641 (10)0.0632 (12)0.0556 (9)0.0072 (8)0.0105 (8)0.0083 (8)
C90.0626 (10)0.0622 (11)0.0589 (9)0.0106 (8)0.0100 (7)0.0092 (8)
C100.0587 (9)0.0502 (10)0.0581 (9)0.0058 (7)0.0031 (7)0.0097 (7)
C110.0626 (11)0.0696 (13)0.0781 (11)0.0025 (9)0.0079 (8)0.0107 (10)
C120.0713 (11)0.0699 (13)0.0928 (14)−0.0089 (9)−0.0062 (10)0.0072 (11)
C130.0924 (14)0.0607 (13)0.0797 (12)−0.0031 (10)−0.0130 (10)−0.0018 (10)
C140.0827 (12)0.0714 (13)0.0687 (11)0.0012 (10)0.0076 (9)−0.0059 (10)
C150.0612 (10)0.0568 (11)0.0653 (10)0.0005 (8)0.0048 (8)0.0043 (8)
O3—C81.2041 (17)C4—C71.473 (2)
O4—C71.2068 (17)C5—C61.370 (2)
O5—C151.3568 (18)C5—C81.479 (2)
O5—H50.8200C6—H60.9300
N1—N21.3791 (17)C9—C101.445 (2)
N1—C71.4044 (19)C9—H90.9300
N1—C81.4105 (19)C10—C111.395 (2)
N2—C91.2811 (18)C10—C151.399 (2)
C1—C21.371 (2)C11—C121.371 (2)
C1—C61.386 (2)C11—H110.9300
C1—H10.9300C12—C131.375 (2)
C2—C31.384 (2)C12—H120.9300
C2—H20.9300C13—C141.368 (2)
C3—C41.377 (2)C13—H130.9300
C3—H30.9300C14—C151.383 (2)
C4—C51.381 (2)C14—H140.9300
C15—O5—H5109.5N1—C7—C4105.31 (13)
N2—N1—C7130.54 (13)O3—C8—N1124.36 (15)
N2—N1—C8117.71 (11)O3—C8—C5130.20 (15)
C7—N1—C8111.74 (13)N1—C8—C5105.43 (12)
C9—N2—N1121.21 (13)N2—C9—C10119.96 (14)
C2—C1—C6120.94 (17)N2—C9—H9120.0
C2—C1—H1119.5C10—C9—H9120.0
C6—C1—H1119.5C11—C10—C15118.16 (15)
C1—C2—C3121.24 (17)C11—C10—C9119.24 (15)
C1—C2—H2119.4C15—C10—C9122.60 (14)
C3—C2—H2119.4C12—C11—C10121.56 (16)
C4—C3—C2117.71 (16)C12—C11—H11119.2
C4—C3—H3121.1C10—C11—H11119.2
C2—C3—H3121.1C11—C12—C13119.14 (17)
C3—C4—C5120.97 (16)C11—C12—H12120.4
C3—C4—C7129.82 (15)C13—C12—H12120.4
C5—C4—C7109.20 (13)C14—C13—C12120.96 (18)
C6—C5—C4121.26 (15)C14—C13—H13119.5
C6—C5—C8130.43 (14)C12—C13—H13119.5
C4—C5—C8108.30 (14)C13—C14—C15120.29 (17)
C5—C6—C1117.88 (16)C13—C14—H14119.9
C5—C6—H6121.1C15—C14—H14119.9
C1—C6—H6121.1O5—C15—C14117.54 (14)
O4—C7—N1125.03 (16)O5—C15—C10122.57 (15)
O4—C7—C4129.65 (15)C14—C15—C10119.88 (15)
C7—N1—N2—C9−5.3 (2)C7—N1—C8—O3178.98 (14)
C8—N1—N2—C9175.89 (14)N2—N1—C8—C5178.99 (12)
C6—C1—C2—C30.2 (3)C7—N1—C8—C5−0.04 (17)
C1—C2—C3—C40.1 (3)C6—C5—C8—O33.4 (3)
C2—C3—C4—C50.4 (2)C4—C5—C8—O3−177.93 (16)
C2—C3—C4—C7−177.72 (16)C6—C5—C8—N1−177.66 (16)
C3—C4—C5—C6−1.3 (2)C4—C5—C8—N11.02 (17)
C7—C4—C5—C6177.25 (15)N1—N2—C9—C10−179.69 (13)
C3—C4—C5—C8179.92 (15)N2—C9—C10—C11−178.34 (14)
C7—C4—C5—C8−1.58 (17)N2—C9—C10—C152.3 (2)
C4—C5—C6—C11.5 (2)C15—C10—C11—C12−0.1 (2)
C8—C5—C6—C1−179.97 (16)C9—C10—C11—C12−179.50 (15)
C2—C1—C6—C5−1.0 (3)C10—C11—C12—C13−0.2 (3)
N2—N1—C7—O4−1.0 (3)C11—C12—C13—C140.4 (3)
C8—N1—C7—O4177.88 (15)C12—C13—C14—C15−0.3 (3)
N2—N1—C7—C4−179.74 (14)C13—C14—C15—O5−179.50 (15)
C8—N1—C7—C4−0.87 (17)C13—C14—C15—C100.0 (3)
C3—C4—C7—O41.2 (3)C11—C10—C15—O5179.69 (14)
C5—C4—C7—O4−177.15 (17)C9—C10—C15—O5−0.9 (2)
C3—C4—C7—N1179.85 (16)C11—C10—C15—C140.2 (2)
C5—C4—C7—N11.52 (17)C9—C10—C15—C14179.56 (15)
N2—N1—C8—O3−2.0 (2)
D—H···AD—HH···AD···AD—H···A
O5—H5···N20.821.902.6152 (16)145
C9—H9···O40.932.242.8937 (19)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5⋯N20.821.902.6152 (16)145
C9—H9⋯O40.932.242.8937 (19)127
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and biological activity of Schiff and Mannich bases bearing 2,4-dichloro-5-fluorophenyl moiety.

Authors:  Mari Sithambaram Karthikeyan; Dasappa Jagadeesh Prasad; Boja Poojary; K Subrahmanya Bhat; Bantwal Shivarama Holla; Nalilu Suchetha Kumari
Journal:  Bioorg Med Chem       Date:  2006-08-01       Impact factor: 3.641

3.  Synthesis, characterization and biological studies of Co(II), Ni(II), Cu(II) and Zn(II) complexes with bidentate Schiff bases derived by heterocyclic ketone.

Authors:  Kiran Singh; Manjeet Singh Barwa; Parikshit Tyagi
Journal:  Eur J Med Chem       Date:  2005-11-03       Impact factor: 6.514

4.  Separation of alpha-glucosidase-inhibitory and liver X receptor-antagonistic activities of phenethylphenyl phthalimide analogs and generation of LXRalpha-selective antagonists.

Authors:  Kazunori Motoshima; Tomomi Noguchi-Yachide; Kazuyuki Sugita; Yuichi Hashimoto; Minoru Ishikawa
Journal:  Bioorg Med Chem       Date:  2009-06-02       Impact factor: 3.641

  4 in total
  1 in total

1.  2-(2-Iodo-phen-yl)isoindoline-1,3-dione.

Authors:  Güneş Demirtaş; Necmi Dege; Ayşen Alaman Ağar; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.