| Literature DB >> 21588796 |
Paul Deburgomaster1, Jon Zubieta.
Abstract
The title complex, [Cu(SO(4))(C(10)H(9)N(3))(CH(3)OH)], is a mononuclear species with the Cu(II) ion in a Jahn-Teller-distorted '4 + 1' square-pyramidal geometry. The basal plane is defined by the pyridyl N-atom donors of the bipyridyl-amine (bpa) ligand and two O-atom donors of the sulfate ligand. The coordination geometry is completed by the axial coordination of a methanol O-atom donor. The axial bond length displays the usual elongation: Cu-O(axial) = 2.168 (2), Cu-O(basal) = 2.016 (2) (average) and Cu-N(basal) = 1.951 (3) Å (average). In the crystal structure, the complex mol-ecules are linked through N-H⋯O and O-H⋯O hydrogen bonds into chains along [100].Entities:
Year: 2010 PMID: 21588796 PMCID: PMC3009304 DOI: 10.1107/S1600536810038675
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(SO4)(C10H9N3)(CH4O)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4522 reflections |
| θ = 3.0–28.3° | |
| µ = 1.78 mm−1 | |
| β = 92.185 (3)° | Plate, green |
| 0.30 × 0.15 × 0.07 mm | |
| Bruker APEX CCD area-detector diffractometer | 3308 independent reflections |
| Radiation source: fine-focus sealed tube | 3119 reflections with |
| graphite | |
| Detector resolution: 512 pixels mm-1 | θmax = 28.1°, θmin = 3.0° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 13215 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3308 reflections | (Δ/σ)max < 0.001 |
| 192 parameters | Δρmax = 0.79 e Å−3 |
| 0 restraints | Δρmin = −0.75 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.64877 (5) | 0.27906 (3) | 0.05295 (2) | 0.00870 (12) | |
| S1 | 0.37436 (10) | 0.16887 (7) | 0.11547 (4) | 0.00900 (16) | |
| O1 | 0.4394 (3) | 0.1566 (2) | 0.03641 (12) | 0.0116 (4) | |
| O2 | 0.5310 (3) | 0.2441 (2) | 0.15261 (13) | 0.0118 (5) | |
| O3 | 0.2005 (3) | 0.2444 (2) | 0.11458 (13) | 0.0131 (5) | |
| O4 | 0.3483 (3) | 0.0501 (2) | 0.15113 (13) | 0.0138 (5) | |
| O5 | 0.8729 (3) | 0.1433 (2) | 0.06432 (14) | 0.0174 (5) | |
| HO5 | 0.9887 | 0.1690 | 0.0770 | 0.029 (12)* | |
| N1 | 0.6684 (4) | 0.3176 (2) | −0.05332 (15) | 0.0100 (5) | |
| N2 | 0.7276 (4) | 0.5328 (2) | −0.03312 (15) | 0.0111 (5) | |
| HN2 | 0.7638 | 0.5982 | −0.0606 | 0.017 (10)* | |
| N3 | 0.7710 (4) | 0.4339 (2) | 0.08540 (15) | 0.0105 (5) | |
| C1 | 0.6369 (4) | 0.2227 (3) | −0.10237 (18) | 0.0134 (6) | |
| H1 | 0.6295 | 0.1404 | −0.0832 | 0.016* | |
| C2 | 0.6153 (5) | 0.2405 (3) | −0.17841 (19) | 0.0144 (6) | |
| H2 | 0.5978 | 0.1717 | −0.2115 | 0.017* | |
| C3 | 0.6197 (5) | 0.3619 (3) | −0.20600 (19) | 0.0152 (7) | |
| H3 | 0.5984 | 0.3774 | −0.2582 | 0.018* | |
| C4 | 0.6550 (4) | 0.4588 (3) | −0.15736 (19) | 0.0129 (6) | |
| H4 | 0.6601 | 0.5419 | −0.1755 | 0.015* | |
| C5 | 0.6835 (4) | 0.4337 (3) | −0.08069 (18) | 0.0103 (6) | |
| C6 | 0.7789 (4) | 0.5367 (3) | 0.04263 (18) | 0.0106 (6) | |
| C7 | 0.8364 (5) | 0.6517 (3) | 0.07262 (19) | 0.0147 (6) | |
| H7 | 0.8393 | 0.7236 | 0.0415 | 0.018* | |
| C8 | 0.8885 (5) | 0.6594 (3) | 0.1477 (2) | 0.0169 (7) | |
| H8 | 0.9272 | 0.7367 | 0.1691 | 0.020* | |
| C9 | 0.8838 (5) | 0.5519 (3) | 0.19230 (19) | 0.0166 (7) | |
| H9 | 0.9213 | 0.5546 | 0.2441 | 0.020* | |
| C10 | 0.8242 (4) | 0.4435 (3) | 0.15956 (18) | 0.0138 (6) | |
| H10 | 0.8194 | 0.3709 | 0.1899 | 0.017* | |
| C11 | 0.8502 (5) | 0.0179 (3) | 0.0901 (2) | 0.0208 (8) | |
| H11A | 0.9712 | −0.0252 | 0.0903 | 0.031* | |
| H11B | 0.7603 | −0.0258 | 0.0565 | 0.031* | |
| H11C | 0.8036 | 0.0189 | 0.1412 | 0.031* |
| Cu1 | 0.00907 (19) | 0.00779 (19) | 0.00915 (19) | −0.00177 (14) | −0.00090 (13) | 0.00045 (14) |
| S1 | 0.0095 (3) | 0.0083 (3) | 0.0091 (3) | −0.0007 (3) | −0.0005 (3) | 0.0008 (3) |
| O1 | 0.0126 (11) | 0.0117 (11) | 0.0104 (10) | −0.0052 (8) | −0.0002 (8) | −0.0010 (9) |
| O2 | 0.0124 (11) | 0.0116 (11) | 0.0114 (10) | −0.0031 (8) | −0.0018 (8) | −0.0003 (8) |
| O3 | 0.0119 (11) | 0.0087 (10) | 0.0187 (12) | 0.0012 (8) | 0.0000 (9) | 0.0031 (9) |
| O4 | 0.0200 (12) | 0.0067 (10) | 0.0145 (11) | −0.0010 (9) | −0.0005 (9) | 0.0022 (9) |
| O5 | 0.0122 (11) | 0.0119 (11) | 0.0277 (13) | −0.0005 (9) | −0.0028 (10) | 0.0031 (10) |
| N1 | 0.0094 (12) | 0.0096 (12) | 0.0112 (12) | −0.0001 (10) | 0.0022 (9) | −0.0007 (10) |
| N2 | 0.0131 (13) | 0.0064 (12) | 0.0138 (13) | −0.0013 (10) | −0.0010 (10) | 0.0018 (10) |
| N3 | 0.0093 (12) | 0.0098 (12) | 0.0122 (13) | −0.0012 (10) | −0.0015 (10) | 0.0004 (10) |
| C1 | 0.0146 (15) | 0.0093 (14) | 0.0163 (16) | −0.0012 (12) | 0.0010 (12) | −0.0021 (12) |
| C2 | 0.0167 (16) | 0.0125 (15) | 0.0139 (15) | −0.0004 (12) | 0.0008 (12) | −0.0046 (12) |
| C3 | 0.0142 (15) | 0.0210 (17) | 0.0107 (15) | 0.0017 (13) | 0.0026 (12) | 0.0012 (13) |
| C4 | 0.0139 (15) | 0.0089 (14) | 0.0160 (16) | 0.0001 (12) | 0.0020 (12) | 0.0019 (12) |
| C5 | 0.0067 (13) | 0.0112 (14) | 0.0132 (15) | 0.0016 (11) | 0.0013 (11) | −0.0023 (12) |
| C6 | 0.0063 (13) | 0.0124 (15) | 0.0132 (15) | 0.0002 (11) | 0.0004 (11) | 0.0004 (12) |
| C7 | 0.0153 (16) | 0.0093 (15) | 0.0191 (16) | 0.0007 (12) | −0.0033 (12) | 0.0016 (13) |
| C8 | 0.0139 (16) | 0.0155 (16) | 0.0211 (17) | −0.0030 (13) | −0.0031 (13) | −0.0071 (14) |
| C9 | 0.0130 (15) | 0.0227 (18) | 0.0137 (16) | −0.0006 (13) | −0.0044 (12) | −0.0014 (13) |
| C10 | 0.0125 (15) | 0.0166 (16) | 0.0119 (15) | −0.0030 (12) | −0.0022 (12) | 0.0028 (12) |
| C11 | 0.0171 (17) | 0.0091 (16) | 0.036 (2) | 0.0005 (13) | −0.0048 (15) | 0.0021 (14) |
| Cu1—N1 | 1.946 (3) | C1—H1 | 0.9500 |
| Cu1—N3 | 1.955 (3) | C2—C3 | 1.394 (5) |
| Cu1—O1 | 2.004 (2) | C2—H2 | 0.9500 |
| Cu1—O2 | 2.027 (2) | C3—C4 | 1.370 (5) |
| Cu1—O5 | 2.168 (2) | C3—H3 | 0.9500 |
| S1—O4 | 1.439 (2) | C4—C5 | 1.398 (5) |
| S1—O3 | 1.482 (2) | C4—H4 | 0.9500 |
| S1—O1 | 1.504 (2) | C6—C7 | 1.401 (4) |
| S1—O2 | 1.511 (2) | C7—C8 | 1.375 (5) |
| O5—C11 | 1.434 (4) | C7—H7 | 0.9500 |
| O5—HO5 | 0.8923 | C8—C9 | 1.402 (5) |
| N1—C5 | 1.343 (4) | C8—H8 | 0.9500 |
| N1—C1 | 1.355 (4) | C9—C10 | 1.363 (5) |
| N2—C6 | 1.384 (4) | C9—H9 | 0.9500 |
| N2—C5 | 1.389 (4) | C10—H10 | 0.9500 |
| N2—HN2 | 0.8988 | C11—H11A | 0.9800 |
| N3—C6 | 1.343 (4) | C11—H11B | 0.9800 |
| N3—C10 | 1.363 (4) | C11—H11C | 0.9800 |
| C1—C2 | 1.369 (5) | ||
| N1—Cu1—N3 | 93.33 (11) | C1—C2—C3 | 118.4 (3) |
| N1—Cu1—O1 | 94.47 (10) | C1—C2—H2 | 120.8 |
| N3—Cu1—O1 | 157.45 (10) | C3—C2—H2 | 120.8 |
| N1—Cu1—O2 | 159.62 (10) | C4—C3—C2 | 119.6 (3) |
| N3—Cu1—O2 | 95.43 (10) | C4—C3—H3 | 120.2 |
| O1—Cu1—O2 | 71.02 (9) | C2—C3—H3 | 120.2 |
| N1—Cu1—O5 | 98.83 (10) | C3—C4—C5 | 119.1 (3) |
| N3—Cu1—O5 | 102.96 (10) | C3—C4—H4 | 120.4 |
| O1—Cu1—O5 | 96.70 (9) | C5—C4—H4 | 120.4 |
| O2—Cu1—O5 | 97.08 (9) | N1—C5—N2 | 120.6 (3) |
| O4—S1—O3 | 111.51 (14) | N1—C5—C4 | 121.5 (3) |
| O4—S1—O1 | 112.62 (14) | N2—C5—C4 | 117.9 (3) |
| O3—S1—O1 | 109.03 (13) | N3—C6—N2 | 120.8 (3) |
| O4—S1—O2 | 112.73 (14) | N3—C6—C7 | 121.8 (3) |
| O3—S1—O2 | 108.55 (13) | N2—C6—C7 | 117.4 (3) |
| O1—S1—O2 | 101.91 (13) | C8—C7—C6 | 119.2 (3) |
| S1—O1—Cu1 | 93.46 (11) | C8—C7—H7 | 120.4 |
| S1—O2—Cu1 | 92.35 (11) | C6—C7—H7 | 120.4 |
| C11—O5—Cu1 | 124.7 (2) | C7—C8—C9 | 119.3 (3) |
| C11—O5—HO5 | 108.9 | C7—C8—H8 | 120.3 |
| Cu1—O5—HO5 | 119.3 | C9—C8—H8 | 120.3 |
| C5—N1—C1 | 118.5 (3) | C10—C9—C8 | 118.3 (3) |
| C5—N1—Cu1 | 124.0 (2) | C10—C9—H9 | 120.8 |
| C1—N1—Cu1 | 116.7 (2) | C8—C9—H9 | 120.8 |
| C6—N2—C5 | 131.5 (3) | C9—C10—N3 | 123.3 (3) |
| C6—N2—HN2 | 115.8 | C9—C10—H10 | 118.3 |
| C5—N2—HN2 | 109.2 | N3—C10—H10 | 118.3 |
| C6—N3—C10 | 118.1 (3) | O5—C11—H11A | 109.5 |
| C6—N3—Cu1 | 124.0 (2) | O5—C11—H11B | 109.5 |
| C10—N3—Cu1 | 117.0 (2) | H11A—C11—H11B | 109.5 |
| N1—C1—C2 | 122.8 (3) | O5—C11—H11C | 109.5 |
| N1—C1—H1 | 118.6 | H11A—C11—H11C | 109.5 |
| C2—C1—H1 | 118.6 | H11B—C11—H11C | 109.5 |
| O4—S1—O1—Cu1 | −130.74 (12) | N1—Cu1—N3—C10 | −168.3 (2) |
| O3—S1—O1—Cu1 | 104.93 (12) | O1—Cu1—N3—C10 | 81.6 (4) |
| O2—S1—O1—Cu1 | −9.70 (13) | O2—Cu1—N3—C10 | 30.1 (2) |
| N1—Cu1—O1—S1 | −157.87 (12) | O5—Cu1—N3—C10 | −68.4 (2) |
| N3—Cu1—O1—S1 | −48.0 (3) | C5—N1—C1—C2 | −1.6 (5) |
| O2—Cu1—O1—S1 | 7.46 (10) | Cu1—N1—C1—C2 | 168.9 (3) |
| O5—Cu1—O1—S1 | 102.68 (12) | N1—C1—C2—C3 | −2.2 (5) |
| O4—S1—O2—Cu1 | 130.54 (12) | C1—C2—C3—C4 | 3.4 (5) |
| O3—S1—O2—Cu1 | −105.41 (12) | C2—C3—C4—C5 | −0.8 (5) |
| O1—S1—O2—Cu1 | 9.58 (13) | C1—N1—C5—N2 | −175.8 (3) |
| N1—Cu1—O2—S1 | 39.0 (3) | Cu1—N1—C5—N2 | 14.4 (4) |
| N3—Cu1—O2—S1 | 154.08 (12) | C1—N1—C5—C4 | 4.3 (4) |
| O1—Cu1—O2—S1 | −7.42 (10) | Cu1—N1—C5—C4 | −165.4 (2) |
| O5—Cu1—O2—S1 | −102.10 (11) | C6—N2—C5—N1 | 6.5 (5) |
| N1—Cu1—O5—C11 | −122.5 (3) | C6—N2—C5—C4 | −173.6 (3) |
| N3—Cu1—O5—C11 | 141.9 (3) | C3—C4—C5—N1 | −3.1 (5) |
| O1—Cu1—O5—C11 | −26.9 (3) | C3—C4—C5—N2 | 177.0 (3) |
| O2—Cu1—O5—C11 | 44.7 (3) | C10—N3—C6—N2 | 179.7 (3) |
| N3—Cu1—N1—C5 | −24.1 (3) | Cu1—N3—C6—N2 | −11.3 (4) |
| O1—Cu1—N1—C5 | 134.7 (3) | C10—N3—C6—C7 | −1.1 (4) |
| O2—Cu1—N1—C5 | 91.3 (4) | Cu1—N3—C6—C7 | 167.9 (2) |
| O5—Cu1—N1—C5 | −127.8 (2) | C5—N2—C6—N3 | −8.2 (5) |
| N3—Cu1—N1—C1 | 166.0 (2) | C5—N2—C6—C7 | 172.6 (3) |
| O1—Cu1—N1—C1 | −35.2 (2) | N3—C6—C7—C8 | 0.8 (5) |
| O2—Cu1—N1—C1 | −78.6 (4) | N2—C6—C7—C8 | −180.0 (3) |
| O5—Cu1—N1—C1 | 62.3 (2) | C6—C7—C8—C9 | 0.4 (5) |
| N1—Cu1—N3—C6 | 22.6 (3) | C7—C8—C9—C10 | −1.2 (5) |
| O1—Cu1—N3—C6 | −87.5 (4) | C8—C9—C10—N3 | 0.9 (5) |
| O2—Cu1—N3—C6 | −139.0 (3) | C6—N3—C10—C9 | 0.3 (5) |
| O5—Cu1—N3—C6 | 122.4 (2) | Cu1—N3—C10—C9 | −169.5 (3) |
| H··· | ||||
| N2—HN2···O3i | 0.90 | 1.97 | 2.854 (3) | 169 |
| O5—HO5···O3ii | 0.89 | 1.82 | 2.700 (3) | 168 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H | 0.90 | 1.97 | 2.854 (3) | 169 |
| O5—H | 0.89 | 1.82 | 2.700 (3) | 168 |
Symmetry codes: (i) ; (ii) .