| Literature DB >> 21588678 |
Zeynep Keleşoğlu, Zeynep Gültekin, Orhan Büyükgüngör.
Abstract
The title compound, C(11)H(13)NO(4), contains a nitrone group, C=N-O-R, the geometry of which shows a Z configuration with near planarity (r.m.s. deviation = 0.0787 Å) around the C=N double bond. An intra-molecular C-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal packing, mol-ecules are linked into R(2) (2)(12) dimers and R(2) (2)(14) rings via C-H⋯O inter-molecular hydrogen bonds.Entities:
Year: 2010 PMID: 21588678 PMCID: PMC3008080 DOI: 10.1107/S1600536810032289
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H13NO4 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 5112 reflections |
| θ = 2.1–27.1° | |
| µ = 0.10 mm−1 | |
| Prism, colourless | |
| 0.77 × 0.46 × 0.25 mm |
| Stoe IPDS II diffractometer | 1391 independent reflections |
| Radiation source: fine-focus sealed tube | 1053 reflections with |
| graphite | |
| rotation method scans | θmax = 26.5°, θmin = 2.2° |
| Absorption correction: integration ( | |
| 5112 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1391 reflections | Δρmax = 0.09 e Å−3 |
| 146 parameters | Δρmin = −0.09 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.030 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.6012 (4) | 0.7397 (2) | 0.36104 (8) | 0.0608 (5) | |
| C2 | 0.5996 (5) | 0.8775 (2) | 0.34738 (10) | 0.0734 (6) | |
| H2 | 0.7092 | 0.9392 | 0.3674 | 0.088* | |
| C3 | 0.4417 (6) | 0.9235 (2) | 0.30549 (11) | 0.0808 (7) | |
| H3 | 0.4449 | 1.0157 | 0.2973 | 0.097* | |
| C4 | 0.2769 (5) | 0.8343 (2) | 0.27506 (10) | 0.0700 (6) | |
| C5 | 0.2692 (5) | 0.6979 (2) | 0.28817 (9) | 0.0669 (6) | |
| H5 | 0.1550 | 0.6373 | 0.2684 | 0.080* | |
| C6 | 0.4307 (5) | 0.6515 (2) | 0.33055 (9) | 0.0642 (5) | |
| H6 | 0.4251 | 0.5594 | 0.3389 | 0.077* | |
| C7 | −0.0090 (7) | 0.8031 (3) | 0.19685 (11) | 0.0960 (8) | |
| H7A | −0.1660 | 0.7516 | 0.2139 | 0.115* | |
| H7B | 0.1394 | 0.7421 | 0.1824 | 0.115* | |
| H7C | −0.0977 | 0.8568 | 0.1696 | 0.115* | |
| C8 | 0.7873 (4) | 0.7021 (2) | 0.40462 (9) | 0.0663 (6) | |
| H8 | 0.8911 | 0.7726 | 0.4210 | 0.080* | |
| C9 | 1.0392 (4) | 0.5582 (3) | 0.46700 (10) | 0.0735 (6) | |
| H9A | 1.1358 | 0.6433 | 0.4767 | 0.088* | |
| H9B | 1.1972 | 0.4944 | 0.4568 | 0.088* | |
| C10 | 0.8628 (4) | 0.5022 (2) | 0.51187 (9) | 0.0651 (6) | |
| C11 | 0.8063 (7) | 0.3210 (2) | 0.57071 (12) | 0.0936 (8) | |
| H11A | 0.5973 | 0.3064 | 0.5610 | 0.112* | |
| H11B | 0.8145 | 0.3798 | 0.6004 | 0.112* | |
| H11C | 0.8999 | 0.2354 | 0.5790 | 0.112* | |
| N1 | 0.8278 (3) | 0.58064 (18) | 0.42386 (7) | 0.0635 (5) | |
| O1 | 0.1341 (5) | 0.88972 (18) | 0.23310 (7) | 0.0935 (5) | |
| O2 | 0.6925 (3) | 0.47139 (14) | 0.40781 (7) | 0.0756 (4) | |
| O3 | 0.6482 (4) | 0.55930 (17) | 0.53126 (7) | 0.0837 (5) | |
| O4 | 0.9683 (3) | 0.38384 (16) | 0.52795 (7) | 0.0818 (5) |
| C1 | 0.0565 (10) | 0.0555 (12) | 0.0703 (14) | −0.0055 (9) | 0.0131 (10) | −0.0071 (10) |
| C2 | 0.0762 (13) | 0.0549 (13) | 0.0892 (17) | −0.0113 (11) | 0.0137 (13) | −0.0082 (12) |
| C3 | 0.0940 (15) | 0.0523 (13) | 0.0962 (18) | −0.0079 (12) | 0.0194 (15) | −0.0010 (13) |
| C4 | 0.0741 (12) | 0.0629 (14) | 0.0728 (15) | 0.0046 (11) | 0.0182 (11) | 0.0054 (11) |
| C5 | 0.0696 (12) | 0.0591 (12) | 0.0720 (16) | −0.0034 (10) | 0.0081 (11) | −0.0023 (10) |
| C6 | 0.0685 (11) | 0.0501 (11) | 0.0741 (14) | −0.0057 (9) | 0.0072 (11) | −0.0025 (10) |
| C7 | 0.1023 (18) | 0.098 (2) | 0.0877 (18) | 0.0114 (18) | −0.0029 (17) | 0.0066 (15) |
| C8 | 0.0579 (10) | 0.0614 (12) | 0.0794 (15) | −0.0110 (10) | 0.0088 (11) | −0.0134 (11) |
| C9 | 0.0527 (9) | 0.0765 (15) | 0.0913 (16) | 0.0053 (10) | −0.0047 (12) | −0.0109 (12) |
| C10 | 0.0557 (9) | 0.0672 (13) | 0.0725 (14) | 0.0086 (10) | −0.0106 (10) | −0.0172 (11) |
| C11 | 0.1051 (17) | 0.0735 (16) | 0.102 (2) | 0.0058 (15) | −0.0075 (17) | 0.0015 (14) |
| N1 | 0.0534 (7) | 0.0632 (11) | 0.0740 (12) | −0.0055 (8) | 0.0053 (8) | −0.0128 (9) |
| O1 | 0.1121 (12) | 0.0784 (11) | 0.0898 (12) | 0.0083 (11) | 0.0037 (11) | 0.0148 (10) |
| O2 | 0.0860 (9) | 0.0599 (9) | 0.0809 (10) | −0.0109 (8) | −0.0067 (9) | −0.0087 (7) |
| O3 | 0.0827 (9) | 0.0877 (11) | 0.0806 (11) | 0.0308 (9) | 0.0081 (9) | −0.0077 (9) |
| O4 | 0.0730 (8) | 0.0676 (10) | 0.1048 (12) | 0.0181 (8) | 0.0022 (9) | −0.0034 (9) |
| C1—C6 | 1.388 (3) | C7—H7C | 0.9600 |
| C1—C2 | 1.399 (3) | C8—N1 | 1.304 (3) |
| C1—C8 | 1.436 (3) | C8—H8 | 0.9300 |
| C2—C3 | 1.359 (4) | C9—N1 | 1.464 (3) |
| C2—H2 | 0.9300 | C9—C10 | 1.496 (3) |
| C3—C4 | 1.380 (3) | C9—H9A | 0.9700 |
| C3—H3 | 0.9300 | C9—H9B | 0.9700 |
| C4—O1 | 1.363 (3) | C10—O3 | 1.203 (2) |
| C4—C5 | 1.382 (3) | C10—O4 | 1.318 (3) |
| C5—C6 | 1.379 (3) | C11—O4 | 1.449 (3) |
| C5—H5 | 0.9300 | C11—H11A | 0.9600 |
| C6—H6 | 0.9300 | C11—H11B | 0.9600 |
| C7—O1 | 1.410 (3) | C11—H11C | 0.9600 |
| C7—H7A | 0.9600 | N1—O2 | 1.294 (2) |
| C7—H7B | 0.9600 | ||
| C6—C1—C2 | 117.3 (2) | N1—C8—C1 | 127.57 (19) |
| C6—C1—C8 | 126.0 (2) | N1—C8—H8 | 116.2 |
| C2—C1—C8 | 116.64 (19) | C1—C8—H8 | 116.2 |
| C3—C2—C1 | 121.6 (2) | N1—C9—C10 | 108.42 (15) |
| C3—C2—H2 | 119.2 | N1—C9—H9A | 110.0 |
| C1—C2—H2 | 119.2 | C10—C9—H9A | 110.0 |
| C2—C3—C4 | 120.5 (2) | N1—C9—H9B | 110.0 |
| C2—C3—H3 | 119.8 | C10—C9—H9B | 110.0 |
| C4—C3—H3 | 119.8 | H9A—C9—H9B | 108.4 |
| O1—C4—C5 | 124.8 (2) | O3—C10—O4 | 123.7 (2) |
| O1—C4—C3 | 116.0 (2) | O3—C10—C9 | 123.6 (2) |
| C5—C4—C3 | 119.3 (2) | O4—C10—C9 | 112.71 (18) |
| C4—C5—C6 | 120.1 (2) | O4—C11—H11A | 109.5 |
| C4—C5—H5 | 120.0 | O4—C11—H11B | 109.5 |
| C6—C5—H5 | 120.0 | H11A—C11—H11B | 109.5 |
| C5—C6—C1 | 121.3 (2) | O4—C11—H11C | 109.5 |
| C5—C6—H6 | 119.4 | H11A—C11—H11C | 109.5 |
| C1—C6—H6 | 119.4 | H11B—C11—H11C | 109.5 |
| O1—C7—H7A | 109.5 | O2—N1—C8 | 125.08 (18) |
| O1—C7—H7B | 109.5 | O2—N1—C9 | 114.05 (17) |
| H7A—C7—H7B | 109.5 | C8—N1—C9 | 120.86 (17) |
| O1—C7—H7C | 109.5 | C4—O1—C7 | 119.3 (2) |
| H7A—C7—H7C | 109.5 | C10—O4—C11 | 116.31 (17) |
| H7B—C7—H7C | 109.5 | ||
| C6—C1—C2—C3 | −1.0 (3) | C2—C1—C8—N1 | −179.0 (2) |
| C8—C1—C2—C3 | 177.2 (2) | N1—C9—C10—O3 | −57.6 (3) |
| C1—C2—C3—C4 | 0.1 (3) | N1—C9—C10—O4 | 122.64 (18) |
| C2—C3—C4—O1 | −178.1 (2) | C1—C8—N1—O2 | −3.3 (3) |
| C2—C3—C4—C5 | 1.2 (3) | C1—C8—N1—C9 | 176.68 (18) |
| O1—C4—C5—C6 | 177.8 (2) | C10—C9—N1—O2 | −60.8 (2) |
| C3—C4—C5—C6 | −1.5 (3) | C10—C9—N1—C8 | 119.2 (2) |
| C4—C5—C6—C1 | 0.5 (3) | C5—C4—O1—C7 | −6.6 (3) |
| C2—C1—C6—C5 | 0.7 (3) | C3—C4—O1—C7 | 172.7 (2) |
| C8—C1—C6—C5 | −177.30 (19) | O3—C10—O4—C11 | 1.4 (3) |
| C6—C1—C8—N1 | −0.9 (3) | C9—C10—O4—C11 | −178.8 (2) |
| H··· | ||||
| C6—H6···O2 | 0.93 | 2.30 | 2.900 (3) | 122 |
| C8—H8···O3i | 0.93 | 2.35 | 3.275 (3) | 175 |
| C9—H9B···O2ii | 0.97 | 2.52 | 3.353 (3) | 144 |
| C11—H11C···O2iii | 0.96 | 2.43 | 3.379 (3) | 172 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6⋯O2 | 0.93 | 2.30 | 2.900 (3) | 122 |
| C8—H8⋯O3i | 0.93 | 2.35 | 3.275 (3) | 175 |
| C9—H9 | 0.97 | 2.52 | 3.353 (3) | 144 |
| C11—H11 | 0.96 | 2.43 | 3.379 (3) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) .