| Literature DB >> 21588619 |
Hoong-Kun Fun, Jia Hao Goh, Yang Liu, Yan Zhang.
Abstract
In the title indoline compound, C(19)H(14)N(2)O(3)S, the pyrrolidine ring adopts an envelope conformation with the four-connected (spiro) C atom as the flap [displacement = 0.148 (3) Å]. The mean plane formed through the indoline unit is inclined at dihedral angles of 89.92 (16) and 59.54 (12)° with the thia-zole and phenyl rings, respectively; the dihedral angle between the latter rings is 9.55 (14)°. In the crystal, pairs of inter-molecular C-H⋯O hydrogen bonds link neighbouring mol-ecules into inversion dimers, producing R(2) (2)(6) hydrogen-bond ring motifs. Weak inter-molecular C-H⋯π as well as π-π inter-actions [centroid-centroid distance = 3.4041 (15) Å] further consolidate the crystal structure.Entities:
Year: 2010 PMID: 21588619 PMCID: PMC3007916 DOI: 10.1107/S1600536810031016
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H14N2O3S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2361 reflections | |
| θ = 2.5–29.9° | |
| µ = 0.23 mm−1 | |
| α = 103.502 (3)° | |
| β = 91.163 (3)° | Block, colourless |
| γ = 100.200 (3)° | 0.24 × 0.10 × 0.05 mm |
| Bruker SMART APEXII CCD diffractometer | 3627 independent reflections |
| Radiation source: fine-focus sealed tube | 2548 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 10748 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3627 reflections | (Δ/σ)max < 0.001 |
| 227 parameters | Δρmax = 0.35 e Å−3 |
| 0 restraints | Δρmin = −0.42 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.31424 (10) | 0.63788 (7) | 0.48799 (6) | 0.01816 (18) | |
| O1 | 0.5459 (3) | 0.90182 (19) | 0.58975 (16) | 0.0190 (4) | |
| O2 | 0.6257 (3) | 0.7176 (2) | 0.74453 (17) | 0.0244 (5) | |
| O3 | 0.8183 (3) | 0.9955 (2) | 1.07309 (17) | 0.0229 (5) | |
| N1 | 0.6758 (3) | 0.9398 (2) | 0.89013 (19) | 0.0156 (5) | |
| N2 | 0.2265 (3) | 0.7250 (2) | 0.70929 (19) | 0.0158 (5) | |
| C1 | 0.5502 (4) | 1.0821 (3) | 0.7864 (2) | 0.0161 (6) | |
| C2 | 0.5067 (4) | 1.2098 (3) | 0.7631 (2) | 0.0186 (6) | |
| H2A | 0.4462 | 1.2074 | 0.6919 | 0.022* | |
| C3 | 0.5566 (4) | 1.3413 (3) | 0.8498 (3) | 0.0204 (6) | |
| H3A | 0.5333 | 1.4291 | 0.8358 | 0.025* | |
| C4 | 0.6407 (4) | 1.3411 (3) | 0.9567 (3) | 0.0212 (6) | |
| H4A | 0.6693 | 1.4293 | 1.0143 | 0.025* | |
| C5 | 0.6845 (4) | 1.2135 (3) | 0.9816 (2) | 0.0180 (6) | |
| H5A | 0.7404 | 1.2149 | 1.0540 | 0.022* | |
| C6 | 0.6399 (4) | 1.0849 (3) | 0.8924 (2) | 0.0159 (6) | |
| C7 | 0.6062 (4) | 0.8429 (3) | 0.7805 (2) | 0.0173 (6) | |
| C8 | 0.5034 (4) | 0.9279 (3) | 0.7127 (2) | 0.0161 (6) | |
| C9 | 0.2983 (4) | 0.8603 (3) | 0.6760 (2) | 0.0156 (6) | |
| H9A | 0.2192 | 0.9334 | 0.6934 | 0.019* | |
| C10 | 0.3596 (4) | 0.8344 (3) | 0.5480 (2) | 0.0168 (6) | |
| H10A | 0.3038 | 0.8885 | 0.4995 | 0.020* | |
| C11 | 0.2314 (4) | 0.6112 (3) | 0.6260 (2) | 0.0156 (6) | |
| C12 | 0.1634 (4) | 0.4594 (3) | 0.6374 (2) | 0.0157 (6) | |
| C13 | 0.0699 (4) | 0.4403 (3) | 0.7366 (2) | 0.0180 (6) | |
| H13A | 0.0553 | 0.5223 | 0.7949 | 0.022* | |
| C14 | −0.0011 (4) | 0.3003 (3) | 0.7486 (2) | 0.0198 (6) | |
| H14A | −0.0637 | 0.2881 | 0.8148 | 0.024* | |
| C15 | 0.0213 (4) | 0.1773 (3) | 0.6613 (3) | 0.0213 (6) | |
| H15A | −0.0262 | 0.0829 | 0.6691 | 0.026* | |
| C16 | 0.1142 (4) | 0.1963 (3) | 0.5632 (3) | 0.0217 (6) | |
| H16A | 0.1287 | 0.1142 | 0.5050 | 0.026* | |
| C17 | 0.1866 (4) | 0.3371 (3) | 0.5504 (2) | 0.0181 (6) | |
| H17A | 0.2497 | 0.3491 | 0.4844 | 0.022* | |
| C18 | 0.7757 (4) | 0.9051 (3) | 0.9798 (2) | 0.0170 (6) | |
| C19 | 0.8273 (4) | 0.7560 (3) | 0.9534 (3) | 0.0240 (7) | |
| H19D | 0.8923 | 0.7446 | 1.0216 | 0.036* | |
| H19A | 0.9029 | 0.7467 | 0.8875 | 0.036* | |
| H19B | 0.7197 | 0.6812 | 0.9343 | 0.036* |
| S1 | 0.0253 (4) | 0.0130 (3) | 0.0158 (3) | 0.0014 (3) | 0.0011 (3) | 0.0044 (3) |
| O1 | 0.0228 (11) | 0.0163 (9) | 0.0174 (10) | 0.0026 (8) | 0.0010 (8) | 0.0037 (8) |
| O2 | 0.0338 (13) | 0.0134 (10) | 0.0266 (11) | 0.0091 (9) | −0.0044 (9) | 0.0030 (8) |
| O3 | 0.0289 (12) | 0.0223 (10) | 0.0180 (10) | 0.0053 (9) | 0.0006 (9) | 0.0060 (9) |
| N1 | 0.0201 (13) | 0.0111 (10) | 0.0167 (11) | 0.0030 (9) | 0.0020 (9) | 0.0054 (9) |
| N2 | 0.0177 (12) | 0.0115 (11) | 0.0184 (12) | 0.0027 (9) | 0.0012 (9) | 0.0042 (9) |
| C1 | 0.0174 (15) | 0.0109 (12) | 0.0202 (14) | 0.0008 (11) | 0.0042 (11) | 0.0052 (11) |
| C2 | 0.0188 (15) | 0.0152 (13) | 0.0237 (14) | 0.0041 (11) | −0.0008 (12) | 0.0081 (11) |
| C3 | 0.0198 (15) | 0.0101 (13) | 0.0332 (16) | 0.0044 (11) | 0.0041 (12) | 0.0074 (12) |
| C4 | 0.0237 (17) | 0.0133 (13) | 0.0241 (15) | 0.0022 (12) | 0.0052 (12) | 0.0002 (11) |
| C5 | 0.0167 (15) | 0.0166 (13) | 0.0196 (14) | 0.0016 (11) | 0.0023 (11) | 0.0034 (11) |
| C6 | 0.0167 (15) | 0.0125 (12) | 0.0204 (14) | 0.0027 (11) | 0.0025 (11) | 0.0075 (11) |
| C7 | 0.0210 (16) | 0.0120 (13) | 0.0192 (14) | 0.0026 (11) | 0.0010 (11) | 0.0050 (11) |
| C8 | 0.0226 (16) | 0.0111 (12) | 0.0151 (13) | 0.0020 (11) | 0.0023 (11) | 0.0049 (11) |
| C9 | 0.0196 (15) | 0.0118 (12) | 0.0162 (13) | 0.0018 (11) | 0.0015 (11) | 0.0055 (11) |
| C10 | 0.0193 (15) | 0.0116 (12) | 0.0202 (14) | 0.0018 (11) | −0.0006 (11) | 0.0062 (11) |
| C11 | 0.0160 (14) | 0.0149 (13) | 0.0180 (13) | 0.0045 (11) | 0.0003 (11) | 0.0066 (11) |
| C12 | 0.0145 (14) | 0.0134 (12) | 0.0191 (14) | 0.0012 (11) | −0.0019 (11) | 0.0049 (11) |
| C13 | 0.0235 (16) | 0.0155 (13) | 0.0149 (13) | 0.0045 (12) | 0.0013 (11) | 0.0027 (11) |
| C14 | 0.0211 (16) | 0.0212 (14) | 0.0193 (14) | 0.0032 (12) | 0.0025 (12) | 0.0100 (12) |
| C15 | 0.0213 (16) | 0.0119 (13) | 0.0314 (16) | 0.0016 (11) | 0.0001 (13) | 0.0079 (12) |
| C16 | 0.0244 (17) | 0.0136 (13) | 0.0256 (15) | 0.0046 (12) | 0.0013 (13) | 0.0011 (12) |
| C17 | 0.0175 (15) | 0.0171 (14) | 0.0197 (14) | 0.0044 (11) | 0.0029 (11) | 0.0033 (11) |
| C18 | 0.0166 (15) | 0.0184 (13) | 0.0178 (14) | 0.0017 (11) | 0.0025 (11) | 0.0086 (11) |
| C19 | 0.0275 (17) | 0.0188 (14) | 0.0282 (16) | 0.0086 (12) | −0.0068 (13) | 0.0083 (12) |
| S1—C11 | 1.790 (3) | C7—C8 | 1.538 (4) |
| S1—C10 | 1.801 (3) | C8—C9 | 1.568 (4) |
| O1—C8 | 1.446 (3) | C9—C10 | 1.544 (4) |
| O1—C10 | 1.452 (3) | C9—H9A | 0.9800 |
| O2—C7 | 1.201 (3) | C10—H10A | 0.9800 |
| O3—C18 | 1.212 (3) | C11—C12 | 1.479 (4) |
| N1—C18 | 1.406 (3) | C12—C17 | 1.390 (4) |
| N1—C7 | 1.415 (3) | C12—C13 | 1.393 (4) |
| N1—C6 | 1.444 (3) | C13—C14 | 1.382 (4) |
| N2—C11 | 1.278 (3) | C13—H13A | 0.9300 |
| N2—C9 | 1.444 (3) | C14—C15 | 1.396 (4) |
| C1—C6 | 1.385 (4) | C14—H14A | 0.9300 |
| C1—C2 | 1.393 (3) | C15—C16 | 1.380 (4) |
| C1—C8 | 1.490 (4) | C15—H15A | 0.9300 |
| C2—C3 | 1.396 (4) | C16—C17 | 1.394 (4) |
| C2—H2A | 0.9300 | C16—H16A | 0.9300 |
| C3—C4 | 1.383 (4) | C17—H17A | 0.9300 |
| C3—H3A | 0.9300 | C18—C19 | 1.498 (4) |
| C4—C5 | 1.400 (4) | C19—H19D | 0.9600 |
| C4—H4A | 0.9300 | C19—H19A | 0.9600 |
| C5—C6 | 1.389 (4) | C19—H19B | 0.9600 |
| C5—H5A | 0.9300 | ||
| C11—S1—C10 | 90.03 (12) | C8—C9—H9A | 113.1 |
| C8—O1—C10 | 92.80 (19) | O1—C10—C9 | 91.54 (19) |
| C18—N1—C7 | 126.1 (2) | O1—C10—S1 | 116.58 (17) |
| C18—N1—C6 | 124.7 (2) | C9—C10—S1 | 106.43 (17) |
| C7—N1—C6 | 109.1 (2) | O1—C10—H10A | 113.4 |
| C11—N2—C9 | 112.1 (2) | C9—C10—H10A | 113.4 |
| C6—C1—C2 | 121.3 (2) | S1—C10—H10A | 113.4 |
| C6—C1—C8 | 110.1 (2) | N2—C11—C12 | 122.6 (2) |
| C2—C1—C8 | 128.5 (2) | N2—C11—S1 | 118.4 (2) |
| C1—C2—C3 | 117.9 (3) | C12—C11—S1 | 118.90 (19) |
| C1—C2—H2A | 121.0 | C17—C12—C13 | 120.0 (2) |
| C3—C2—H2A | 121.0 | C17—C12—C11 | 121.5 (2) |
| C4—C3—C2 | 120.0 (2) | C13—C12—C11 | 118.5 (2) |
| C4—C3—H3A | 120.0 | C14—C13—C12 | 120.3 (2) |
| C2—C3—H3A | 120.0 | C14—C13—H13A | 119.8 |
| C3—C4—C5 | 122.7 (3) | C12—C13—H13A | 119.8 |
| C3—C4—H4A | 118.7 | C13—C14—C15 | 119.9 (3) |
| C5—C4—H4A | 118.7 | C13—C14—H14A | 120.0 |
| C6—C5—C4 | 116.4 (3) | C15—C14—H14A | 120.0 |
| C6—C5—H5A | 121.8 | C16—C15—C14 | 119.7 (2) |
| C4—C5—H5A | 121.8 | C16—C15—H15A | 120.2 |
| C1—C6—C5 | 121.6 (2) | C14—C15—H15A | 120.2 |
| C1—C6—N1 | 109.4 (2) | C15—C16—C17 | 120.8 (3) |
| C5—C6—N1 | 128.9 (2) | C15—C16—H16A | 119.6 |
| O2—C7—N1 | 126.9 (2) | C17—C16—H16A | 119.6 |
| O2—C7—C8 | 125.5 (2) | C12—C17—C16 | 119.3 (3) |
| N1—C7—C8 | 107.6 (2) | C12—C17—H17A | 120.3 |
| O1—C8—C1 | 117.7 (2) | C16—C17—H17A | 120.3 |
| O1—C8—C7 | 111.3 (2) | O3—C18—N1 | 119.7 (2) |
| C1—C8—C7 | 102.8 (2) | O3—C18—C19 | 123.0 (2) |
| O1—C8—C9 | 90.84 (19) | N1—C18—C19 | 117.2 (2) |
| C1—C8—C9 | 118.2 (2) | C18—C19—H19D | 109.5 |
| C7—C8—C9 | 116.3 (2) | C18—C19—H19A | 109.5 |
| N2—C9—C10 | 113.0 (2) | H19D—C19—H19A | 109.5 |
| N2—C9—C8 | 116.6 (2) | C18—C19—H19B | 109.5 |
| C10—C9—C8 | 84.8 (2) | H19D—C19—H19B | 109.5 |
| N2—C9—H9A | 113.1 | H19A—C19—H19B | 109.5 |
| C10—C9—H9A | 113.1 | ||
| C6—C1—C2—C3 | 0.1 (4) | C11—N2—C9—C8 | −94.8 (3) |
| C8—C1—C2—C3 | 176.1 (3) | O1—C8—C9—N2 | 114.4 (2) |
| C1—C2—C3—C4 | −2.3 (4) | C1—C8—C9—N2 | −123.2 (2) |
| C2—C3—C4—C5 | 2.1 (4) | C7—C8—C9—N2 | 0.0 (3) |
| C3—C4—C5—C6 | 0.4 (4) | O1—C8—C9—C10 | 1.18 (17) |
| C2—C1—C6—C5 | 2.4 (4) | C1—C8—C9—C10 | 123.6 (2) |
| C8—C1—C6—C5 | −174.2 (3) | C7—C8—C9—C10 | −113.2 (2) |
| C2—C1—C6—N1 | −177.0 (3) | C8—O1—C10—C9 | 1.27 (18) |
| C8—C1—C6—N1 | 6.4 (3) | C8—O1—C10—S1 | −107.98 (19) |
| C4—C5—C6—C1 | −2.6 (4) | N2—C9—C10—O1 | −117.9 (2) |
| C4—C5—C6—N1 | 176.7 (3) | C8—C9—C10—O1 | −1.18 (17) |
| C18—N1—C6—C1 | 175.4 (3) | N2—C9—C10—S1 | 0.4 (3) |
| C7—N1—C6—C1 | −0.3 (3) | C8—C9—C10—S1 | 117.15 (17) |
| C18—N1—C6—C5 | −3.9 (4) | C11—S1—C10—O1 | 99.1 (2) |
| C7—N1—C6—C5 | −179.7 (3) | C11—S1—C10—C9 | −1.19 (19) |
| C18—N1—C7—O2 | −2.6 (5) | C9—N2—C11—C12 | −179.1 (2) |
| C6—N1—C7—O2 | 173.1 (3) | C9—N2—C11—S1 | −2.2 (3) |
| C18—N1—C7—C8 | 178.8 (2) | C10—S1—C11—N2 | 2.1 (2) |
| C6—N1—C7—C8 | −5.6 (3) | C10—S1—C11—C12 | 179.2 (2) |
| C10—O1—C8—C1 | −124.1 (2) | N2—C11—C12—C17 | −173.5 (3) |
| C10—O1—C8—C7 | 117.6 (2) | S1—C11—C12—C17 | 9.6 (3) |
| C10—O1—C8—C9 | −1.26 (18) | N2—C11—C12—C13 | 8.2 (4) |
| C6—C1—C8—O1 | −132.0 (2) | S1—C11—C12—C13 | −168.7 (2) |
| C2—C1—C8—O1 | 51.7 (4) | C17—C12—C13—C14 | −0.5 (4) |
| C6—C1—C8—C7 | −9.3 (3) | C11—C12—C13—C14 | 177.8 (3) |
| C2—C1—C8—C7 | 174.4 (3) | C12—C13—C14—C15 | 0.2 (4) |
| C6—C1—C8—C9 | 120.4 (3) | C13—C14—C15—C16 | −0.1 (4) |
| C2—C1—C8—C9 | −55.9 (4) | C14—C15—C16—C17 | 0.2 (4) |
| O2—C7—C8—O1 | −42.9 (4) | C13—C12—C17—C16 | 0.6 (4) |
| N1—C7—C8—O1 | 135.8 (2) | C11—C12—C17—C16 | −177.7 (3) |
| O2—C7—C8—C1 | −169.8 (3) | C15—C16—C17—C12 | −0.4 (4) |
| N1—C7—C8—C1 | 8.9 (3) | C7—N1—C18—O3 | −175.5 (3) |
| O2—C7—C8—C9 | 59.3 (4) | C6—N1—C18—O3 | 9.5 (4) |
| N1—C7—C8—C9 | −122.0 (2) | C7—N1—C18—C19 | 5.5 (4) |
| C11—N2—C9—C10 | 1.1 (3) | C6—N1—C18—C19 | −169.5 (2) |
| Cg1 is the centroid of C1–C6 phenyl ring. |
| H··· | ||||
| C10—H10A···O1i | 0.98 | 2.56 | 3.261 (3) | 129 |
| C14—H14A···Cg1ii | 0.93 | 2.67 | 3.423 (3) | 139 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of C1–C6 phenyl ring.
| H⋯ | ||||
|---|---|---|---|---|
| C10—H10 | 0.98 | 2.56 | 3.261 (3) | 129 |
| C14—H14 | 0.93 | 2.67 | 3.423 (3) | 139 |
Symmetry codes: (i) ; (ii) .