Literature DB >> 21588571

2,2'-Bi-1,3,4-thia-diazole-5,5'-diamine tetra-hydrate.

Chaveng Pakawatchai1, Saowanit Saithong.   

Abstract

In the title compound, C(4)H(4)N(6)S(2)·4H(2)O, the complete organic mol-ecule is generated by crystallographic twofold symmetry and the dihedral angle between the aromatic rings is 10.24 (3)°. In the crystal, inter-molecular N-H⋯N, N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds and aromatic π-π stacking inter-actions [centroid-centroid separations = 3.530 (3) and 3.600 (3) Å] are observed.

Entities:  

Year:  2010        PMID: 21588571      PMCID: PMC3007951          DOI: 10.1107/S160053681002996X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the pharmacutical properties of thia­dia­zo­les, see: Chapleo et al. (1986 ▶; 1987 ▶); Stillings et al. (1986 ▶); Clerici et al. (2001 ▶). For their tribological behavior, see: Zhu et al. (2009 ▶) and for their pesticidal activity, see: Fan et al. (2010 ▶).

Experimental

Crystal data

C4H4N6S2·4H2O M = 272.32 Monoclinic, a = 19.977 (6) Å b = 6.678 (2) Å c = 9.328 (3) Å β = 112.514 (6)° V = 1149.7 (6) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 293 K 0.29 × 0.06 × 0.03 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.659, T max = 1.000 5047 measured reflections 1015 independent reflections 902 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.091 S = 1.12 1015 reflections 91 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: Mercury. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681002996X/hb5580sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681002996X/hb5580Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H4N6S2·4H2OF(000) = 568
Mr = 272.32Dx = 1.573 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1375 reflections
a = 19.977 (6) Åθ = 2.2–27.5°
b = 6.678 (2) ŵ = 0.48 mm1
c = 9.328 (3) ÅT = 293 K
β = 112.514 (6)°Rod, colourless
V = 1149.7 (6) Å30.29 × 0.06 × 0.03 mm
Z = 4
Bruker APEX CCD diffractometer1015 independent reflections
Radiation source: fine-focus sealed tube902 reflections with I > 2σ(I)
graphiteRint = 0.040
Frames, each covering 0.3 ° in ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −23→23
Tmin = 0.659, Tmax = 1.000k = −7→7
5047 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.046P)2 + 0.8924P] where P = (Fo2 + 2Fc2)/3
1015 reflections(Δ/σ)max < 0.001
91 parametersΔρmax = 0.36 e Å3
6 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
S10.40277 (3)0.22880 (9)0.80732 (6)0.0302 (2)
C10.49090 (11)0.2498 (3)0.8184 (2)0.0254 (5)
C20.43905 (11)0.2386 (3)1.0092 (2)0.0250 (5)
N10.53913 (9)0.2631 (2)0.9582 (2)0.0275 (4)
N20.51008 (10)0.2557 (3)1.0700 (2)0.0278 (4)
N30.39755 (11)0.2341 (3)1.0925 (2)0.0346 (5)
H3A0.3518 (10)0.196 (4)1.049 (3)0.042*
H3B0.4198 (14)0.236 (4)1.194 (2)0.042*
O10.30903 (9)0.3504 (3)0.3923 (2)0.0468 (5)
H1A0.3539 (10)0.338 (5)0.434 (3)0.056*
H1B0.2881 (16)0.242 (3)0.391 (4)0.056*
O20.25880 (9)1.0305 (3)0.9186 (2)0.0451 (5)
H2A0.2393 (14)0.997 (5)0.977 (3)0.054*
H2B0.2376 (14)1.067 (4)0.827 (2)0.054*
U11U22U33U12U13U23
S10.0234 (3)0.0449 (4)0.0199 (3)0.0004 (2)0.0057 (2)−0.0007 (2)
C10.0253 (11)0.0284 (11)0.0227 (11)0.0003 (8)0.0096 (9)0.0001 (8)
C20.0270 (11)0.0256 (11)0.0206 (11)0.0016 (8)0.0071 (9)−0.0001 (8)
N10.0273 (10)0.0324 (10)0.0230 (10)0.0002 (7)0.0100 (8)0.0004 (7)
N20.0269 (9)0.0364 (11)0.0203 (9)0.0005 (7)0.0093 (8)0.0002 (7)
N30.0275 (10)0.0542 (13)0.0232 (10)−0.0021 (8)0.0109 (9)−0.0003 (9)
O10.0292 (9)0.0543 (12)0.0501 (11)−0.0052 (8)0.0076 (8)0.0054 (9)
O20.0356 (10)0.0546 (11)0.0420 (11)−0.0013 (8)0.0113 (8)0.0006 (9)
S1—C11.729 (2)N3—H3A0.882 (17)
S1—C21.741 (2)N3—H3B0.875 (17)
C1—N11.294 (3)O1—H1A0.834 (18)
C1—C1i1.455 (4)O1—H1B0.833 (17)
C2—N21.316 (3)O2—H2A0.815 (17)
C2—N31.337 (3)O2—H2B0.834 (17)
N1—N21.375 (3)
C1—S1—C286.53 (10)C2—N2—N1111.99 (17)
C1—S1—C286.53 (10)C2—N2—N1111.99 (17)
N1—C1—C1i122.9 (2)C2—N3—H3A120.2 (17)
N1—C1—S1114.49 (16)C2—N3—H3A120.2 (17)
C1i—C1—S1122.6 (2)C2—N3—H3B117.0 (19)
N2—C2—N3123.9 (2)C2—N3—H3B117.0 (19)
N2—C2—S1113.78 (16)H3A—N3—H3B121 (3)
N3—C2—S1122.30 (17)H1A—O1—H1B111 (3)
C1—N1—N2113.20 (17)H2A—O2—H2B126 (3)
C2—S1—C1—N1−0.35 (15)C1i—C1—N1—N2−178.63 (10)
C2—S1—C1—N1−0.35 (15)S1—C1—N1—N20.6 (2)
C2—S1—C1—C1i178.91 (8)N3—C2—N2—N1−178.00 (19)
C2—S1—C1—C1i178.91 (8)S1—C2—N2—N10.4 (2)
C1—S1—C2—N2−0.02 (16)C1—N1—N2—C2−0.6 (2)
C1—S1—C2—N3178.36 (19)C1—N1—N2—C2−0.6 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3A···O2ii0.88 (2)2.11 (2)2.953 (3)161 (2)
N3—H3B···N2iii0.88 (2)2.12 (2)2.981 (3)170 (3)
O1—H1A···N1i0.83 (2)2.05 (2)2.872 (3)171 (3)
O1—H1B···O2iv0.83 (2)1.96 (2)2.780 (3)168 (3)
O2—H2A···O1v0.82 (2)2.07 (2)2.867 (3)167 (3)
O2—H2B···O1vi0.83 (2)1.97 (2)2.806 (3)178 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯O2i0.88 (2)2.11 (2)2.953 (3)161 (2)
N3—H3B⋯N2ii0.88 (2)2.12 (2)2.981 (3)170 (3)
O1—H1A⋯N1iii0.83 (2)2.05 (2)2.872 (3)171 (3)
O1—H1B⋯O2iv0.83 (2)1.96 (2)2.780 (3)168 (3)
O2—H2A⋯O1v0.82 (2)2.07 (2)2.867 (3)167 (3)
O2—H2B⋯O1vi0.83 (2)1.97 (2)2.806 (3)178 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  6 in total

1.  Synthesis of 2-amino-5-sulfanyl-1,3,4-thiadiazole derivatives and evaluation of their antidepressant and anxiolytic activity.

Authors:  F Clerici; D Pocar; M Guido; A Loche; V Perlini; M Brufani
Journal:  J Med Chem       Date:  2001-03-15       Impact factor: 7.446

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Substituted 1,3,4-thiadiazoles with anticonvulsant activity. 2. Aminoalkyl derivatives.

Authors:  M R Stillings; A P Welbourn; D S Walter
Journal:  J Med Chem       Date:  1986-11       Impact factor: 7.446

4.  Synthesis, crystal structure, and biological activity of 4-methyl-1,2,3-thiadiazole-containing 1,2,4-triazolo[3,4-b][1,3,4]thiadiazoles.

Authors:  Zhijin Fan; Zhikun Yang; Haike Zhang; Na Mi; Huan Wang; Fei Cai; Xiang Zuo; Qingxiang Zheng; Haibin Song
Journal:  J Agric Food Chem       Date:  2010-03-10       Impact factor: 5.279

5.  Substituted 1,3,4-thiadiazoles with anticonvulsant activity. 1. Hydrazines.

Authors:  C B Chapleo; M Myers; P L Myers; J F Saville; A C Smith; M R Stillings; I F Tulloch; D S Walter; A P Welbourn
Journal:  J Med Chem       Date:  1986-11       Impact factor: 7.446

6.  Substituted 1,3,4-thiadiazoles with anticonvulsant activity. 3. Guanidines.

Authors:  C B Chapleo; P L Myers; A C Smith; I F Tulloch; S Turner; D S Walter
Journal:  J Med Chem       Date:  1987-05       Impact factor: 7.446

  6 in total

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