Literature DB >> 21588236

4-Allyl-6-bromo-2-phenyl-4H-imidazo[4,5-b]pyridine monohydrate.

Younès Ouzidan, Youssef Kandri Rodi, Hafid Zouihri, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

In the mol-ecule of the title compound, C(15)H(12)BrN(3)·H(2)O, the phenyl ring is coplanar with the imidazopyridine ring system [dihedral angle = 0.4 (1)°]. The water mol-ecule is disordered over two positions with occupancies of 0.58 (1) and 0.42 (1), and it is linked to the main mol-ecule via an O-H⋯N hydrogen bond.

Entities:  

Year:  2010        PMID: 21588236      PMCID: PMC3007243          DOI: 10.1107/S1600536810025122

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Ouzidan et al. (2010 ▶).

Experimental

Crystal data

C15H12BrN3·H2O M = 332.20 Triclinic, a = 7.4363 (1) Å b = 9.4238 (1) Å c = 11.0829 (2) Å α = 68.076 (1)° β = 74.637 (1)° γ = 79.736 (1)° V = 692.02 (2) Å3 Z = 2 Mo Kα radiation μ = 2.97 mm−1 T = 293 K 0.20 × 0.20 × 0.15 mm

Data collection

Bruker X8 APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.588, T max = 0.664 14314 measured reflections 3158 independent reflections 2791 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.078 S = 0.98 3158 reflections 203 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810025122/ci5117sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810025122/ci5117Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12BrN3·H2OZ = 2
Mr = 332.20F(000) = 336
Triclinic, P1Dx = 1.594 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.4363 (1) ÅCell parameters from 7204 reflections
b = 9.4238 (1) Åθ = 2.3–27.2°
c = 11.0829 (2) ŵ = 2.97 mm1
α = 68.076 (1)°T = 293 K
β = 74.637 (1)°Prism, yellow
γ = 79.736 (1)°0.20 × 0.20 × 0.15 mm
V = 692.02 (2) Å3
Bruker X8 APEXII area-detector diffractometer3158 independent reflections
Radiation source: fine-focus sealed tube2791 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 27.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.588, Tmax = 0.664k = −12→12
14314 measured reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H atoms treated by a mixture of independent and constrained refinement
S = 0.98w = 1/[σ2(Fo2) + (0.0529P)2 + 0.1091P] where P = (Fo2 + 2Fc2)/3
3158 reflections(Δ/σ)max = 0.001
203 parametersΔρmax = 0.25 e Å3
6 restraintsΔρmin = −0.39 e Å3
xyzUiso*/UeqOcc. (<1)
Br10.78351 (3)0.73753 (2)0.425170 (19)0.05007 (9)
O11.1389 (9)0.1942 (6)0.8855 (4)0.0635 (16)0.582 (14)
H111.028 (3)0.229 (7)0.903 (7)0.095*0.582 (14)
H121.208 (6)0.237 (6)0.908 (6)0.095*0.582 (14)
O1'1.0501 (14)0.1260 (12)0.8987 (6)0.081 (3)0.418 (14)
H131.089 (17)0.191 (10)0.917 (11)0.122*0.418 (14)
H141.001 (16)0.059 (9)0.969 (6)0.122*0.418 (14)
N10.61186 (19)0.78390 (15)0.79149 (15)0.0323 (3)
N20.66816 (19)0.61173 (15)1.00435 (15)0.0347 (3)
N30.82874 (19)0.41411 (16)0.93153 (16)0.0358 (3)
C10.6432 (2)0.80592 (19)0.66074 (18)0.0350 (3)
H10.59760.89770.60350.042*
C20.7415 (2)0.6947 (2)0.61055 (19)0.0368 (4)
C30.8123 (2)0.55420 (19)0.69201 (19)0.0371 (4)
H30.87800.47910.65760.044*
C40.7798 (2)0.53257 (18)0.82533 (18)0.0331 (3)
C50.6797 (2)0.65118 (18)0.87503 (17)0.0313 (3)
C60.5091 (2)0.90590 (19)0.84527 (19)0.0381 (4)
H6A0.42100.96720.79080.046*
H6B0.43860.85870.93520.046*
C70.6408 (3)1.0068 (2)0.8464 (2)0.0481 (5)
H70.73670.96070.89170.058*
C80.6310 (5)1.1541 (3)0.7888 (3)0.0711 (7)
H8A0.53681.20370.74270.085*
H8B0.71801.21050.79330.085*
C90.7604 (2)0.46733 (18)1.03315 (18)0.0339 (3)
C100.7799 (2)0.37743 (19)1.17031 (18)0.0354 (4)
C110.7034 (3)0.4364 (2)1.2724 (2)0.0422 (4)
H11A0.64070.53421.25350.051*
C120.7194 (3)0.3511 (3)1.4024 (2)0.0498 (5)
H12A0.66780.39191.46990.060*
C130.8118 (3)0.2058 (3)1.4313 (2)0.0522 (5)
H13A0.82190.14811.51840.063*
C140.8890 (3)0.1467 (2)1.3309 (2)0.0509 (5)
H14A0.95200.04901.35050.061*
C150.8741 (3)0.2306 (2)1.2012 (2)0.0436 (4)
H150.92690.18921.13420.052*
U11U22U33U12U13U23
Br10.06412 (15)0.05036 (14)0.03761 (13)0.00253 (9)−0.01310 (9)−0.01926 (9)
O10.076 (3)0.056 (2)0.068 (2)0.020 (2)−0.0289 (19)−0.0341 (17)
O1'0.091 (5)0.084 (5)0.074 (3)0.022 (4)−0.021 (3)−0.044 (3)
N10.0350 (7)0.0260 (6)0.0359 (8)0.0023 (5)−0.0108 (6)−0.0108 (5)
N20.0360 (7)0.0294 (7)0.0370 (8)0.0013 (5)−0.0094 (6)−0.0104 (6)
N30.0352 (7)0.0288 (7)0.0422 (8)0.0013 (5)−0.0112 (6)−0.0107 (6)
C10.0373 (8)0.0307 (8)0.0371 (9)0.0006 (6)−0.0122 (7)−0.0106 (7)
C20.0394 (8)0.0368 (9)0.0373 (9)−0.0032 (7)−0.0104 (7)−0.0148 (7)
C30.0382 (8)0.0321 (8)0.0435 (10)0.0008 (6)−0.0084 (7)−0.0181 (7)
C40.0307 (7)0.0276 (7)0.0418 (9)0.0004 (6)−0.0095 (7)−0.0129 (7)
C50.0302 (7)0.0274 (7)0.0368 (9)−0.0010 (6)−0.0083 (6)−0.0116 (6)
C60.0422 (9)0.0305 (8)0.0394 (9)0.0086 (7)−0.0097 (7)−0.0143 (7)
C70.0513 (11)0.0487 (11)0.0530 (12)0.0017 (8)−0.0112 (9)−0.0303 (9)
C80.101 (2)0.0508 (13)0.0645 (16)−0.0212 (13)−0.0088 (14)−0.0227 (12)
C90.0293 (7)0.0299 (8)0.0402 (9)−0.0027 (6)−0.0087 (6)−0.0085 (7)
C100.0318 (8)0.0307 (8)0.0407 (9)−0.0048 (6)−0.0107 (7)−0.0058 (7)
C110.0443 (9)0.0376 (9)0.0419 (10)−0.0011 (7)−0.0118 (8)−0.0101 (7)
C120.0521 (11)0.0543 (12)0.0419 (11)−0.0061 (9)−0.0123 (9)−0.0132 (9)
C130.0524 (11)0.0521 (12)0.0427 (11)−0.0107 (9)−0.0178 (9)0.0021 (9)
C140.0495 (11)0.0370 (10)0.0561 (13)−0.0005 (8)−0.0199 (9)−0.0006 (9)
C150.0432 (9)0.0348 (9)0.0482 (11)0.0000 (7)−0.0120 (8)−0.0093 (8)
Br1—C21.8887 (19)C6—C71.487 (3)
O1—H110.834 (10)C6—H6A0.97
O1—H120.838 (10)C6—H6B0.97
O1—H130.43 (12)C7—C81.291 (3)
O1'—H110.97 (5)C7—H70.93
O1'—H130.836 (10)C8—H8A0.93
O1'—H140.838 (10)C8—H8B0.93
N1—C11.346 (2)C9—C101.470 (3)
N1—C51.354 (2)C10—C111.389 (3)
N1—C61.489 (2)C10—C151.396 (2)
N2—C51.322 (2)C11—C121.388 (3)
N2—C91.372 (2)C11—H11A0.93
N3—C91.344 (2)C12—C131.379 (3)
N3—C41.365 (2)C12—H12A0.93
C1—C21.375 (2)C13—C141.374 (3)
C1—H10.93C13—H13A0.93
C2—C31.398 (2)C14—C151.381 (3)
C3—C41.374 (3)C14—H14A0.93
C3—H30.93C15—H150.93
C4—C51.433 (2)
H11—O1—H12110.6 (18)H6A—C6—H6B108.0
H12—O1—H13101 (6)C8—C7—C6124.3 (2)
H11—O1'—H14114 (9)C8—C7—H7117.8
H13—O1'—H14110.2 (19)C6—C7—H7117.8
C1—N1—C5119.78 (14)C7—C8—H8A120.0
C1—N1—C6120.89 (14)C7—C8—H8B120.0
C5—N1—C6119.29 (14)H8A—C8—H8B120.0
C5—N2—C9101.46 (14)N3—C9—N2117.02 (16)
C9—N3—C4103.09 (13)N3—C9—C10122.81 (15)
N1—C1—C2120.95 (16)N2—C9—C10120.17 (16)
N1—C1—H1119.5C11—C10—C15118.49 (18)
C2—C1—H1119.5C11—C10—C9120.61 (16)
C1—C2—C3122.00 (17)C15—C10—C9120.90 (17)
C1—C2—Br1117.99 (14)C12—C11—C10120.79 (18)
C3—C2—Br1120.01 (13)C12—C11—H11A119.6
C4—C3—C2116.73 (15)C10—C11—H11A119.6
C4—C3—H3121.6C13—C12—C11120.0 (2)
C2—C3—H3121.6C13—C12—H12A120.0
N3—C4—C3132.84 (15)C11—C12—H12A120.0
N3—C4—C5106.85 (15)C14—C13—C12119.7 (2)
C3—C4—C5120.29 (15)C14—C13—H13A120.1
N2—C5—N1128.19 (15)C12—C13—H13A120.1
N2—C5—C4111.57 (14)C13—C14—C15120.79 (19)
N1—C5—C4120.24 (16)C13—C14—H14A119.6
C7—C6—N1110.95 (14)C15—C14—H14A119.6
C7—C6—H6A109.4C14—C15—C10120.2 (2)
N1—C6—H6A109.4C14—C15—H15119.9
C7—C6—H6B109.4C10—C15—H15119.9
N1—C6—H6B109.4
C5—N1—C1—C20.8 (2)C1—N1—C6—C7−91.40 (19)
C6—N1—C1—C2178.59 (16)C5—N1—C6—C786.45 (19)
N1—C1—C2—C30.4 (3)N1—C6—C7—C8124.1 (2)
N1—C1—C2—Br1−178.60 (12)C4—N3—C9—N20.46 (19)
C1—C2—C3—C4−0.4 (3)C4—N3—C9—C10179.96 (15)
Br1—C2—C3—C4178.57 (12)C5—N2—C9—N30.11 (19)
C9—N3—C4—C3177.66 (18)C5—N2—C9—C10−179.41 (14)
C9—N3—C4—C5−0.79 (17)N3—C9—C10—C11−178.67 (16)
C2—C3—C4—N3−178.94 (17)N2—C9—C10—C110.8 (2)
C2—C3—C4—C5−0.7 (2)N3—C9—C10—C150.8 (2)
C9—N2—C5—N1179.89 (16)N2—C9—C10—C15−179.71 (15)
C9—N2—C5—C4−0.63 (17)C15—C10—C11—C12−0.3 (3)
C1—N1—C5—N2177.63 (16)C9—C10—C11—C12179.18 (17)
C6—N1—C5—N2−0.2 (3)C10—C11—C12—C13−0.1 (3)
C1—N1—C5—C4−1.8 (2)C11—C12—C13—C140.5 (3)
C6—N1—C5—C4−179.69 (15)C12—C13—C14—C15−0.4 (3)
N3—C4—C5—N20.95 (19)C13—C14—C15—C100.0 (3)
C3—C4—C5—N2−177.74 (14)C11—C10—C15—C140.4 (3)
N3—C4—C5—N1−179.52 (14)C9—C10—C15—C14−179.12 (16)
C3—C4—C5—N11.8 (2)
D—H···AD—HH···AD···AD—H···A
O1—H11···N30.83 (1)2.14 (3)2.887 (4)149 (5)
O1—H12···N2i0.84 (1)2.41 (2)3.229 (7)165 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H11⋯N30.83 (1)2.14 (3)2.887 (4)149 (5)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4-Benzyl-6-bromo-2-phenyl-4H-imidazo[4,5-b]pyridine.

Authors:  Y Ouzidan; S Obbade; F Capet; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-27
  2 in total
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1.  3-[(1-Benzyl-1H-1,2,3-triazol-5-yl)meth-yl]-6-bromo-2-phenyl-3H-imidazo[4,5-b]pyridine.

Authors:  Younes Ouzidan; Youssef Kandri Rodi; Frank R Fronczek; Ramaiyer Venkatraman; El Mokhtar Essassi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-15

2.  Crystal structure and Hirshfeld surface analysis of 4-allyl-6-bromo-2-(4-chloro-phen-yl)-4H-imidazo[4,5-b]pyridine.

Authors:  Selma Bourichi; Youssef Kandri Rodi; Tuncer Hökelek; Amal Haoudi; Catherine Renard; Frédéric Capet
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-01-01
  2 in total

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