Literature DB >> 21588182

Dichloridobis(N,N,N',N'-tetra-methyl-thio-urea-κS)mercury(II).

Sidra Nawaz, Haseeba Sadaf, Mohammed Fettouhi, Atif Fazal, Saeed Ahmad.   

Abstract

In the title compound, [HgCl(2)(C(5)H(12)N(2)S)(2)], the Hg(II) atom is located on a twofold rotation axis and is bonded in a distorted tetra-hedral coordination mode to two chloride ions and to two tetra-methyl-thio-urea (tmtu) mol-ecules through their S atoms. The crystal structure is stabilized by C-H⋯N and C-H⋯S hydrogen bonds.

Entities:  

Year:  2010        PMID: 21588182      PMCID: PMC3007291          DOI: 10.1107/S1600536810028138

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Hg(II) complexes with thio­urea ligands, see: Ahmad et al. (2009 ▶); Chieh (1977 ▶); Lobana et al. (2008 ▶); Popovic et al. (2000 ▶, 2002 ▶). The structure of the title compound is isotypic with [Cd(tmtu)2Br2] (Nawaz et al., 2010a ▶) and [Cd(tmtu)2I2] (Nawaz et al., 2010b ▶).

Experimental

Crystal data

[HgCl2(C5H12N2S)2] M = 535.94 Monoclinic, a = 18.7418 (12) Å b = 9.5920 (6) Å c = 13.5177 (9) Å β = 130.834 (1)° V = 1838.6 (2) Å3 Z = 4 Mo Kα radiation μ = 8.88 mm−1 T = 293 K 0.29 × 0.24 × 0.11 mm

Data collection

Bruker SMART APEX area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.183, T max = 0.442 12167 measured reflections 2281 independent reflections 2103 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.020 wR(F 2) = 0.040 S = 1.07 2281 reflections 92 parameters H-atom parameters constrained Δρmax = 0.72 e Å−3 Δρmin = −0.79 e Å−3 Data collection: SMART (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810028138/wm2376sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810028138/wm2376Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgCl2(C5H12N2S)2]F(000) = 1032
Mr = 535.94Dx = 1.936 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 12167 reflections
a = 18.7418 (12) Åθ = 2.6–28.3°
b = 9.5920 (6) ŵ = 8.88 mm1
c = 13.5177 (9) ÅT = 293 K
β = 130.834 (1)°Colourless, plate
V = 1838.6 (2) Å30.29 × 0.24 × 0.11 mm
Z = 4
Bruker SMART APEX area detector diffractometer2281 independent reflections
Radiation source: normal-focus sealed tube2103 reflections with I > 2σ(I)
graphiteRint = 0.031
ω scansθmax = 28.3°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→24
Tmin = 0.183, Tmax = 0.442k = −12→12
12167 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.020H-atom parameters constrained
wR(F2) = 0.040w = 1/[σ2(Fo2) + (0.0109P)2 + 2.5249P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.002
2281 reflectionsΔρmax = 0.72 e Å3
92 parametersΔρmin = −0.79 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00244 (8)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg11.00000.703186 (17)0.25000.04539 (7)
Cl11.14323 (5)0.55933 (9)0.34397 (8)0.0591 (2)
S11.02994 (5)0.83371 (9)0.43697 (7)0.04983 (18)
N10.91286 (18)0.7622 (3)0.4747 (3)0.0482 (6)
N20.84430 (16)0.8798 (3)0.2830 (2)0.0488 (6)
C10.92029 (18)0.8240 (3)0.3933 (3)0.0367 (5)
C20.8466 (3)0.8103 (4)0.4900 (4)0.0704 (10)
H2A0.81920.89710.44460.106*
H2B0.87930.82320.58120.106*
H2C0.79770.74210.45420.106*
C30.9842 (3)0.6647 (4)0.5756 (4)0.0769 (11)
H3A1.01310.61820.54680.115*
H3B0.95490.59700.59140.115*
H3C1.03130.71490.65480.115*
C40.7491 (2)0.8240 (5)0.2114 (4)0.0802 (12)
H4A0.75310.73290.24410.120*
H4B0.71740.81790.12000.120*
H4C0.71440.88470.22310.120*
C50.8518 (3)0.9798 (4)0.2094 (4)0.0774 (11)
H5A0.91211.02500.26690.116*
H5B0.80271.04830.17110.116*
H5C0.84540.93230.14140.116*
U11U22U33U12U13U23
Hg10.05014 (10)0.04849 (10)0.05259 (11)0.0000.04018 (9)0.000
Cl10.0519 (4)0.0599 (5)0.0652 (5)0.0126 (3)0.0381 (4)0.0065 (4)
S10.0386 (3)0.0716 (5)0.0453 (4)−0.0091 (3)0.0300 (3)−0.0142 (3)
N10.0611 (15)0.0488 (13)0.0566 (14)0.0005 (11)0.0480 (13)0.0002 (11)
N20.0439 (13)0.0560 (15)0.0465 (13)0.0051 (11)0.0295 (11)0.0020 (11)
C10.0415 (13)0.0364 (13)0.0415 (13)−0.0023 (10)0.0312 (12)−0.0061 (10)
C20.085 (2)0.081 (3)0.092 (3)−0.011 (2)0.078 (2)−0.014 (2)
C30.098 (3)0.070 (2)0.076 (2)0.015 (2)0.063 (2)0.024 (2)
C40.0387 (17)0.116 (3)0.070 (2)−0.0013 (18)0.0292 (17)−0.015 (2)
C50.088 (3)0.081 (3)0.069 (2)0.027 (2)0.054 (2)0.029 (2)
Hg1—Cl1i2.5028 (8)C2—H2B0.9600
Hg1—Cl12.5028 (8)C2—H2C0.9600
Hg1—S12.5329 (7)C3—H3A0.9600
Hg1—S1i2.5329 (7)C3—H3B0.9600
S1—C11.730 (3)C3—H3C0.9600
N1—C11.336 (3)C4—H4A0.9600
N1—C21.460 (4)C4—H4B0.9600
N1—C31.461 (4)C4—H4C0.9600
N2—C11.327 (3)C5—H5A0.9600
N2—C51.453 (4)C5—H5B0.9600
N2—C41.466 (4)C5—H5C0.9600
C2—H2A0.9600
Cl1i—Hg1—Cl1113.08 (4)H2A—C2—H2C109.5
Cl1i—Hg1—S1104.08 (3)H2B—C2—H2C109.5
Cl1—Hg1—S1107.56 (3)N1—C3—H3A109.5
Cl1i—Hg1—S1i107.56 (3)N1—C3—H3B109.5
Cl1—Hg1—S1i104.08 (3)H3A—C3—H3B109.5
S1—Hg1—S1i120.75 (4)N1—C3—H3C109.5
C1—S1—Hg1101.20 (9)H3A—C3—H3C109.5
C1—N1—C2122.2 (3)H3B—C3—H3C109.5
C1—N1—C3121.9 (3)N2—C4—H4A109.5
C2—N1—C3114.4 (3)N2—C4—H4B109.5
C1—N2—C5121.5 (3)H4A—C4—H4B109.5
C1—N2—C4122.9 (3)N2—C4—H4C109.5
C5—N2—C4114.2 (3)H4A—C4—H4C109.5
N2—C1—N1119.5 (2)H4B—C4—H4C109.5
N2—C1—S1121.6 (2)N2—C5—H5A109.5
N1—C1—S1118.9 (2)N2—C5—H5B109.5
N1—C2—H2A109.5H5A—C5—H5B109.5
N1—C2—H2B109.5N2—C5—H5C109.5
H2A—C2—H2B109.5H5A—C5—H5C109.5
N1—C2—H2C109.5H5B—C5—H5C109.5
D—H···AD—HH···AD···AD—H···A
C2—H2A···N20.962.522.849 (6)100
C3—H3A···S10.962.682.996 (6)100
C5—H5A···S10.962.623.024 (5)105
Table 1

Selected bond lengths (Å)

Hg1—Cl12.5028 (8)
Hg1—S12.5329 (7)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯N20.962.522.849 (6)100
C3—H3A⋯S10.962.682.996 (6)100
C5—H5A⋯S10.962.623.024 (5)105
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