Literature DB >> 21588133

Diaqua-(1,4,8,11-tetra-aza-cyclo-tetra-decane-κN,N,N,N)copper(II) dideca-noate dihydrate.

Nur Syamimi Ahmad Tajidi1, Norbani Abdullah, Zainudin Arifin, Kong Wai Tan, Seik Weng Ng.   

Abstract

The Cu(II) atom in the title salt, [Cu(C(10)H(24)N(4))(H(2)O)(2)][CH(3)(CH(2))(8)CO(2)](2)·2H(2)O, is chelated by the four N atoms of the 1,4,8,11-tetra-aza-cyclo-tetra-decane (cyclam) ligand and is coordinated by two water mol-ecules in a Jahn-Teller-type tetra-gonally distorted octa-hedral geometry. The Cu(II) atom lies on a center of inversion. The cations, anions and uncoordinated water mol-ecules are linked by N-H⋯O and O-H⋯O hydrogen bonds, forming a layer structure parallel to (001).

Entities:  

Year:  2010        PMID: 21588133      PMCID: PMC3007572          DOI: 10.1107/S1600536810025699

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related (1,4,8,11-tetra­aza­cyclo­tetra­deca­ne)copper carb­oxy­l­ates, see: Lindoy et al. (2003 ▶); Hunter et al. (2005 ▶).

Experimental

Crystal data

[Cu(C10H24N4)(H2O)2](C10H19O2)2·2H2O M = 678.44 Triclinic, a = 6.9820 (6) Å b = 8.8006 (8) Å c = 15.3291 (13) Å α = 95.045 (1)° β = 93.158 (1)° γ = 98.423 (1)° V = 925.93 (14) Å3 Z = 1 Mo Kα radiation μ = 0.64 mm−1 T = 100 K 0.30 × 0.20 × 0.02 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.832, T max = 0.987 8967 measured reflections 4230 independent reflections 3736 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.086 S = 1.06 4230 reflections 220 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810025699/bt5286sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810025699/bt5286Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C10H24N4)(H2O)2](C10H19O2)2·2H2OZ = 1
Mr = 678.44F(000) = 371
Triclinic, P1Dx = 1.217 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9820 (6) ÅCell parameters from 3079 reflections
b = 8.8006 (8) Åθ = 2.4–28.1°
c = 15.3291 (13) ŵ = 0.64 mm1
α = 95.045 (1)°T = 100 K
β = 93.158 (1)°Plate, purple
γ = 98.423 (1)°0.30 × 0.20 × 0.02 mm
V = 925.93 (14) Å3
Bruker SMART APEX diffractometer4230 independent reflections
Radiation source: fine-focus sealed tube3736 reflections with I > 2σ(I)
graphiteRint = 0.034
ω scansθmax = 27.5°, θmin = 1.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.832, Tmax = 0.987k = −11→11
8967 measured reflectionsl = −19→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0348P)2 + 0.1911P] where P = (Fo2 + 2Fc2)/3
4230 reflections(Δ/σ)max = 0.001
220 parametersΔρmax = 0.33 e Å3
6 restraintsΔρmin = −0.43 e Å3
xyzUiso*/Ueq
Cu10.50000.50000.50000.01105 (9)
O10.9257 (2)0.05590 (14)0.38643 (8)0.0242 (3)
O20.93155 (17)0.28063 (13)0.33012 (8)0.0179 (3)
O1W0.81745 (18)0.48550 (14)0.57137 (9)0.0204 (3)
H110.900 (3)0.555 (2)0.5970 (13)0.035 (6)*
H120.870 (3)0.4065 (17)0.5704 (15)0.037 (7)*
O2W0.95494 (18)0.20230 (14)0.54959 (9)0.0185 (3)
H210.945 (3)0.160 (2)0.4983 (8)0.040 (7)*
H220.982 (3)0.1320 (19)0.5783 (13)0.029 (6)*
N10.55275 (19)0.35212 (15)0.39806 (9)0.0135 (3)
H10.6723 (15)0.342 (2)0.4045 (12)0.022 (5)*
N20.6209 (2)0.68731 (15)0.44674 (9)0.0130 (3)
H20.7437 (14)0.692 (2)0.4559 (12)0.017 (5)*
C10.5260 (3)0.4008 (2)0.30884 (11)0.0184 (4)
H1A0.38790.41040.29630.022*
H1B0.56020.32110.26530.022*
C20.6516 (3)0.5543 (2)0.29990 (11)0.0200 (4)
H2A0.65090.57220.23700.024*
H2B0.78690.54800.32050.024*
C30.5859 (3)0.6912 (2)0.35105 (11)0.0186 (4)
H3A0.65700.78810.33320.022*
H3B0.44570.69020.33670.022*
C40.5625 (2)0.82300 (18)0.49625 (12)0.0179 (4)
H4A0.42970.83610.47540.021*
H4B0.65220.91740.48710.021*
C50.5685 (2)0.79793 (18)0.59202 (12)0.0181 (4)
H5A0.70390.79670.61450.022*
H5B0.51780.88260.62590.022*
C60.9049 (2)0.13621 (18)0.32350 (11)0.0137 (3)
C70.8332 (3)0.04950 (19)0.23452 (11)0.0172 (4)
H7A0.68950.03110.23090.021*
H7B0.8776−0.05250.23130.021*
C80.8998 (2)0.1307 (2)0.15509 (11)0.0177 (4)
H8A0.82650.07600.10150.021*
H8B0.86900.23720.16130.021*
C91.1168 (2)0.1371 (2)0.14399 (12)0.0194 (4)
H9A1.19020.20060.19490.023*
H9B1.14990.03140.14370.023*
C101.1795 (2)0.2040 (2)0.06012 (11)0.0189 (4)
H10A1.14260.30840.05980.023*
H10B1.10780.13890.00930.023*
C111.3965 (3)0.2155 (2)0.04841 (12)0.0204 (4)
H11A1.46840.28660.09680.024*
H11B1.43560.11250.05250.024*
C121.4536 (2)0.2727 (2)−0.03877 (11)0.0188 (4)
H12A1.40840.3732−0.04390.023*
H12B1.38570.1989−0.08700.023*
C131.6711 (3)0.2921 (2)−0.05047 (11)0.0196 (4)
H13A1.73940.3678−0.00320.024*
H13B1.71740.1922−0.04440.024*
C141.7228 (3)0.3460 (2)−0.13872 (12)0.0253 (4)
H14A1.67230.4440−0.14540.030*
H14B1.65700.2685−0.18570.030*
C151.9396 (3)0.3709 (3)−0.15119 (14)0.0329 (5)
H15A1.96170.4047−0.20950.049*
H15B1.99080.2740−0.14580.049*
H15C2.00580.4501−0.10620.049*
U11U22U33U12U13U23
Cu10.01256 (15)0.00841 (14)0.01241 (16)0.00162 (10)0.00342 (11)0.00065 (10)
O10.0374 (8)0.0185 (6)0.0167 (7)0.0035 (5)−0.0007 (6)0.0043 (5)
O20.0220 (6)0.0131 (5)0.0184 (6)0.0051 (5)−0.0005 (5)−0.0012 (5)
O1W0.0139 (6)0.0158 (6)0.0306 (8)0.0045 (5)−0.0032 (5)−0.0027 (5)
O2W0.0200 (6)0.0159 (6)0.0200 (7)0.0046 (5)0.0001 (5)0.0010 (5)
N10.0089 (7)0.0154 (7)0.0157 (7)0.0023 (5)0.0020 (6)−0.0020 (5)
N20.0096 (7)0.0127 (6)0.0176 (7)0.0030 (5)0.0031 (6)0.0028 (5)
C10.0170 (9)0.0250 (9)0.0133 (9)0.0061 (7)0.0014 (7)−0.0026 (7)
C20.0177 (9)0.0310 (10)0.0133 (9)0.0062 (7)0.0045 (7)0.0074 (7)
C30.0170 (9)0.0211 (8)0.0193 (9)0.0037 (7)0.0017 (7)0.0098 (7)
C40.0144 (8)0.0085 (7)0.0312 (10)0.0019 (6)0.0050 (7)0.0014 (7)
C50.0148 (8)0.0109 (7)0.0270 (10)0.0001 (6)0.0039 (7)−0.0052 (7)
C60.0098 (8)0.0163 (8)0.0155 (9)0.0034 (6)0.0040 (6)−0.0002 (6)
C70.0184 (9)0.0157 (8)0.0163 (9)−0.0006 (6)0.0040 (7)−0.0016 (7)
C80.0179 (9)0.0211 (8)0.0133 (8)0.0003 (7)0.0030 (7)−0.0002 (7)
C90.0176 (9)0.0240 (9)0.0168 (9)0.0027 (7)0.0032 (7)0.0017 (7)
C100.0174 (9)0.0234 (9)0.0156 (9)0.0009 (7)0.0036 (7)0.0024 (7)
C110.0192 (9)0.0259 (9)0.0162 (9)0.0025 (7)0.0054 (7)0.0021 (7)
C120.0165 (9)0.0242 (9)0.0150 (9)0.0003 (7)0.0031 (7)0.0018 (7)
C130.0186 (9)0.0250 (9)0.0154 (9)0.0024 (7)0.0033 (7)0.0027 (7)
C140.0210 (10)0.0367 (11)0.0182 (10)0.0012 (8)0.0044 (7)0.0071 (8)
C150.0250 (10)0.0443 (12)0.0316 (12)0.0039 (9)0.0138 (9)0.0104 (9)
Cu1—N12.029 (1)C5—H5B0.9900
Cu1—N1i2.029 (1)C6—C71.524 (2)
Cu1—N22.000 (1)C7—C81.526 (2)
Cu1—N2i2.000 (1)C7—H7A0.9900
Cu1—O1w2.443 (1)C7—H7B0.9900
O1—C61.259 (2)C8—C91.527 (2)
O2—C61.2515 (19)C8—H8A0.9900
O1W—H110.832 (10)C8—H8B0.9900
O1W—H120.831 (9)C9—C101.520 (2)
O2W—H210.834 (9)C9—H9A0.9900
O2W—H220.828 (9)C9—H9B0.9900
N1—C11.479 (2)C10—C111.525 (2)
N1—C5i1.485 (2)C10—H10A0.9900
N1—H10.855 (9)C10—H10B0.9900
N2—C31.478 (2)C11—C121.522 (2)
N2—C41.478 (2)C11—H11A0.9900
N2—H20.854 (9)C11—H11B0.9900
C1—C21.520 (2)C12—C131.525 (2)
C1—H1A0.9900C12—H12A0.9900
C1—H1B0.9900C12—H12B0.9900
C2—C31.521 (2)C13—C141.517 (2)
C2—H2A0.9900C13—H13A0.9900
C2—H2B0.9900C13—H13B0.9900
C3—H3A0.9900C14—C151.522 (3)
C3—H3B0.9900C14—H14A0.9900
C4—C51.503 (3)C14—H14B0.9900
C4—H4A0.9900C15—H15A0.9800
C4—H4B0.9900C15—H15B0.9800
C5—N1i1.485 (2)C15—H15C0.9800
C5—H5A0.9900
N2—Cu1—N2i180.000 (1)O2—C6—C7118.55 (15)
N2—Cu1—N193.73 (6)O1—C6—C7116.87 (14)
N2i—Cu1—N186.27 (6)C6—C7—C8115.27 (13)
N2—Cu1—N1i86.27 (6)C6—C7—H7A108.5
N2i—Cu1—N1i93.73 (6)C8—C7—H7A108.5
N1—Cu1—N1i180.00 (5)C6—C7—H7B108.5
N2—Cu1—O1W88.48 (5)C8—C7—H7B108.5
N2i—Cu1—O1W91.52 (5)H7A—C7—H7B107.5
N1—Cu1—O1W90.25 (5)C9—C8—C7113.07 (15)
N1i—Cu1—O1W89.75 (5)C9—C8—H8A109.0
Cu1—O1W—H11130.2 (16)C7—C8—H8A109.0
Cu1—O1W—H12124.9 (16)C9—C8—H8B109.0
H11—O1W—H12105 (2)C7—C8—H8B109.0
H21—O2W—H22102 (2)H8A—C8—H8B107.8
C1—N1—C5i112.07 (13)C10—C9—C8113.02 (15)
C1—N1—Cu1117.07 (10)C10—C9—H9A109.0
C5i—N1—Cu1106.17 (10)C8—C9—H9A109.0
C1—N1—H1105.4 (13)C10—C9—H9B109.0
C5i—N1—H1108.8 (13)C8—C9—H9B109.0
Cu1—N1—H1107.0 (13)H9A—C9—H9B107.8
C3—N2—C4111.44 (13)C9—C10—C11114.15 (15)
C3—N2—Cu1117.71 (10)C9—C10—H10A108.7
C4—N2—Cu1107.26 (10)C11—C10—H10A108.7
C3—N2—H2105.7 (13)C9—C10—H10B108.7
C4—N2—H2107.8 (13)C11—C10—H10B108.7
Cu1—N2—H2106.5 (13)H10A—C10—H10B107.6
N1—C1—C2111.30 (14)C12—C11—C10113.15 (15)
N1—C1—H1A109.4C12—C11—H11A108.9
C2—C1—H1A109.4C10—C11—H11A108.9
N1—C1—H1B109.4C12—C11—H11B108.9
C2—C1—H1B109.4C10—C11—H11B108.9
H1A—C1—H1B108.0H11A—C11—H11B107.8
C1—C2—C3113.84 (14)C11—C12—C13114.24 (15)
C1—C2—H2A108.8C11—C12—H12A108.7
C3—C2—H2A108.8C13—C12—H12A108.7
C1—C2—H2B108.8C11—C12—H12B108.7
C3—C2—H2B108.8C13—C12—H12B108.7
H2A—C2—H2B107.7H12A—C12—H12B107.6
N2—C3—C2111.53 (13)C14—C13—C12112.92 (15)
N2—C3—H3A109.3C14—C13—H13A109.0
C2—C3—H3A109.3C12—C13—H13A109.0
N2—C3—H3B109.3C14—C13—H13B109.0
C2—C3—H3B109.3C12—C13—H13B109.0
H3A—C3—H3B108.0H13A—C13—H13B107.8
N2—C4—C5108.50 (13)C13—C14—C15114.09 (16)
N2—C4—H4A110.0C13—C14—H14A108.7
C5—C4—H4A110.0C15—C14—H14A108.7
N2—C4—H4B110.0C13—C14—H14B108.7
C5—C4—H4B110.0C15—C14—H14B108.7
H4A—C4—H4B108.4H14A—C14—H14B107.6
N1i—C5—C4108.31 (13)C14—C15—H15A109.5
N1i—C5—H5A110.0C14—C15—H15B109.5
C4—C5—H5A110.0H15A—C15—H15B109.5
N1i—C5—H5B110.0C14—C15—H15C109.5
C4—C5—H5B110.0H15A—C15—H15C109.5
H5A—C5—H5B108.4H15B—C15—H15C109.5
O2—C6—O1124.52 (15)
N2—Cu1—N1—C1−39.47 (12)C4—N2—C3—C2178.27 (13)
N2i—Cu1—N1—C1140.53 (12)Cu1—N2—C3—C2−57.23 (16)
O1W—Cu1—N1—C1−127.96 (11)C1—C2—C3—N270.00 (18)
N2—Cu1—N1—C5i−165.46 (11)C3—N2—C4—C5170.11 (13)
N2i—Cu1—N1—C5i14.54 (11)Cu1—N2—C4—C539.93 (15)
O1W—Cu1—N1—C5i106.05 (11)N2—C4—C5—N1i−54.24 (17)
N1—Cu1—N2—C339.47 (12)O2—C6—C7—C831.5 (2)
N1i—Cu1—N2—C3−140.53 (12)O1—C6—C7—C8−151.30 (16)
O1W—Cu1—N2—C3129.61 (11)C6—C7—C8—C969.42 (19)
N1—Cu1—N2—C4166.02 (11)C7—C8—C9—C10174.47 (14)
N1i—Cu1—N2—C4−13.98 (11)C8—C9—C10—C11178.58 (14)
O1W—Cu1—N2—C4−103.84 (10)C9—C10—C11—C12176.14 (14)
C5i—N1—C1—C2−179.84 (13)C10—C11—C12—C13177.40 (14)
Cu1—N1—C1—C257.16 (16)C11—C12—C13—C14178.81 (15)
N1—C1—C2—C3−70.19 (19)C12—C13—C14—C15178.29 (16)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.86 (1)2.30 (1)3.025 (2)144 (2)
N2—H2···O2wii0.85 (1)2.18 (1)2.974 (2)154 (2)
O1w—H11···O2ii0.83 (1)1.95 (1)2.774 (2)172 (2)
O1w—H12···O2w0.83 (1)1.98 (1)2.799 (2)169 (2)
O2w—H21···O10.83 (1)1.86 (1)2.694 (2)177 (2)
O2w—H22···O1iii0.83 (1)1.97 (1)2.771 (2)163 (2)
Table 1

Selected bond lengths (Å)

Cu1—N12.029 (1)
Cu1—N22.000 (1)
Cu1—O1w2.443 (1)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O20.86 (1)2.30 (1)3.025 (2)144 (2)
N2—H2⋯O2wi0.85 (1)2.18 (1)2.974 (2)154 (2)
O1w—H11⋯O2i0.83 (1)1.95 (1)2.774 (2)172 (2)
O1w—H12⋯O2w0.83 (1)1.98 (1)2.799 (2)169 (2)
O2w—H21⋯O10.83 (1)1.86 (1)2.694 (2)177 (2)
O2w—H22⋯O1ii0.83 (1)1.97 (1)2.771 (2)163 (2)

Symmetry codes: (i) ; (ii) .

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  1 in total

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