Literature DB >> 21588006

8-[(1E)-1-(2-Aminophenyl-iminio)eth-yl]-2-oxo-2H-chromen-7-olate.

E S Aazam, A F El Husseiny, H M Al-Amri, Orhan Büyükgüngör.   

Abstract

The title Schiff base, C(17)H(14)N(2)O(3), exists as an NH tautomer with the H atom of the phenol group transferred to the imine N atom. The iminium H atom is involved in a strong intra-molecular N(+)-H⋯O(-) hydrogen bond to the phenolate O atom, forming an S(6) motif. In the crystal structure, N-H⋯O hydrogen bonds form a C(9) chain parallel to [100] and a C(11) chain parallel to [010], while C-H⋯O hydrogen bonds form a C(11) chain parallel to [010]. The combination of N-H⋯O and C-H⋯O hydrogen bonds generates R(4) (3)(30) rings parallel to the ab plane.

Entities:  

Year:  2010        PMID: 21588006      PMCID: PMC3006678          DOI: 10.1107/S1600536810023093

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Patil et al. (2010 ▶); Aazam et al. (2006 ▶); Filarowski (2005 ▶); El Husseiny et al. (2008 ▶); Aazam et al. (2008 ▶); Karabıyık et al. (2008 ▶). For the graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C17H14N2O3 M = 294.30 Orthorhombic, a = 7.5462 (3) Å b = 18.9324 (11) Å c = 20.0445 (9) Å V = 2863.7 (2) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.44 × 0.29 × 0.20 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.962, T max = 0.984 25561 measured reflections 2868 independent reflections 1972 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.095 S = 1.00 2868 reflections 212 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.11 e Å−3 Δρmin = −0.15 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810023093/gk2282sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810023093/gk2282Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14N2O3F(000) = 1232
Mr = 294.30Dx = 1.365 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 25561 reflections
a = 7.5462 (3) Åθ = 2.0–26.7°
b = 18.9324 (11) ŵ = 0.10 mm1
c = 20.0445 (9) ÅT = 296 K
V = 2863.7 (2) Å3Prism, yellow
Z = 80.44 × 0.29 × 0.20 mm
Stoe IPDS 2 diffractometer2868 independent reflections
Radiation source: fine-focus sealed tube1972 reflections with I > 2σ(I)
graphiteRint = 0.039
rotation method scansθmax = 26.2°, θmin = 2.0°
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)h = −9→9
Tmin = 0.962, Tmax = 0.984k = −23→23
25561 measured reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0515P)2 + ] where P = (Fo2 + 2Fc2)/3
2868 reflections(Δ/σ)max < 0.001
212 parametersΔρmax = 0.11 e Å3
1 restraintΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3733 (2)0.81253 (7)0.38471 (7)0.0462 (4)
C20.5193 (2)0.83854 (7)0.41971 (8)0.0487 (4)
C30.4876 (2)0.89106 (8)0.46724 (8)0.0584 (4)
H30.58220.90950.49140.070*
C40.3197 (3)0.91605 (8)0.47909 (9)0.0632 (5)
H40.30190.95070.51130.076*
C50.1777 (3)0.89021 (9)0.44379 (9)0.0646 (5)
H50.06420.90730.45190.077*
C60.2051 (2)0.83870 (8)0.39613 (9)0.0581 (4)
H60.10980.82150.37160.070*
C70.44310 (18)0.69702 (7)0.33766 (7)0.0446 (3)
C80.4588 (2)0.66606 (8)0.40572 (8)0.0602 (4)
H8A0.41210.69870.43790.072*
H8B0.58130.65690.41540.072*
H8C0.39320.62270.40770.072*
C90.47034 (19)0.65822 (7)0.27529 (7)0.0442 (3)
C100.4368 (2)0.69219 (7)0.21251 (8)0.0491 (4)
C110.4623 (2)0.65452 (8)0.15220 (8)0.0584 (4)
H110.44020.67670.11170.070*
C120.5186 (2)0.58675 (8)0.15284 (9)0.0587 (4)
H120.53320.56300.11260.070*
C130.5555 (2)0.55134 (7)0.21273 (8)0.0525 (4)
C140.53174 (19)0.58766 (7)0.27212 (8)0.0455 (4)
C150.6172 (2)0.48034 (8)0.21610 (10)0.0641 (5)
H150.63070.45480.17680.077*
C160.6561 (2)0.44943 (8)0.27412 (10)0.0671 (5)
H160.69430.40270.27460.081*
C170.6397 (2)0.48719 (7)0.33552 (10)0.0588 (4)
N10.39971 (17)0.76316 (6)0.33146 (7)0.0488 (3)
N20.68956 (19)0.81302 (8)0.41013 (8)0.0631 (4)
O10.38245 (16)0.75749 (5)0.20935 (6)0.0603 (3)
O20.67878 (17)0.46798 (5)0.39135 (7)0.0735 (4)
O30.57044 (14)0.55503 (5)0.33133 (5)0.0541 (3)
H10.390 (3)0.7742 (10)0.2853 (8)0.087 (6)*
H2A0.715 (2)0.7907 (9)0.3703 (10)0.071 (5)*
H2B0.772 (3)0.8469 (11)0.4178 (11)0.099 (7)*
U11U22U33U12U13U23
C10.0615 (9)0.0363 (7)0.0409 (9)−0.0009 (6)0.0025 (7)0.0007 (6)
C20.0586 (9)0.0435 (7)0.0439 (9)−0.0018 (7)0.0053 (7)−0.0002 (6)
C30.0700 (11)0.0557 (8)0.0494 (10)−0.0061 (8)0.0042 (8)−0.0116 (7)
C40.0844 (13)0.0537 (9)0.0515 (10)0.0048 (8)0.0143 (9)−0.0090 (7)
C50.0651 (10)0.0662 (10)0.0623 (12)0.0133 (8)0.0086 (9)−0.0029 (9)
C60.0586 (10)0.0577 (9)0.0579 (11)0.0039 (7)−0.0008 (8)−0.0007 (8)
C70.0490 (8)0.0393 (7)0.0454 (9)−0.0045 (6)−0.0014 (7)0.0024 (6)
C80.0889 (12)0.0459 (8)0.0459 (10)0.0056 (8)0.0010 (9)0.0037 (7)
C90.0483 (8)0.0397 (7)0.0446 (9)−0.0056 (6)−0.0026 (6)−0.0011 (6)
C100.0563 (9)0.0455 (7)0.0454 (9)−0.0067 (6)−0.0048 (7)0.0001 (6)
C110.0734 (11)0.0588 (9)0.0431 (10)−0.0053 (8)−0.0043 (8)−0.0011 (7)
C120.0681 (10)0.0594 (9)0.0486 (11)−0.0077 (8)0.0003 (8)−0.0134 (7)
C130.0544 (9)0.0465 (8)0.0565 (11)−0.0054 (6)−0.0008 (7)−0.0097 (7)
C140.0474 (8)0.0411 (7)0.0480 (10)−0.0076 (6)−0.0040 (7)0.0001 (6)
C150.0686 (11)0.0489 (8)0.0749 (13)−0.0011 (8)−0.0002 (10)−0.0181 (8)
C160.0724 (11)0.0416 (8)0.0874 (15)0.0047 (7)−0.0082 (10)−0.0091 (9)
C170.0586 (10)0.0384 (7)0.0795 (14)−0.0011 (7)−0.0101 (9)0.0018 (8)
N10.0667 (8)0.0393 (6)0.0403 (8)0.0007 (5)−0.0026 (6)−0.0012 (5)
N20.0562 (8)0.0674 (9)0.0659 (10)−0.0034 (7)0.0055 (8)−0.0179 (8)
O10.0862 (8)0.0476 (6)0.0472 (7)0.0064 (5)−0.0074 (6)0.0060 (5)
O20.0904 (9)0.0482 (6)0.0820 (10)0.0054 (6)−0.0181 (8)0.0106 (6)
O30.0671 (7)0.0391 (5)0.0560 (7)0.0035 (5)−0.0068 (5)0.0008 (5)
C1—C61.381 (2)C9—C101.436 (2)
C1—C21.396 (2)C10—O11.3040 (17)
C1—N11.4327 (18)C10—C111.417 (2)
C2—N21.386 (2)C11—C121.351 (2)
C2—C31.398 (2)C11—H110.9300
C3—C41.373 (2)C12—C131.403 (2)
C3—H30.9300C12—H120.9300
C4—C51.374 (3)C13—C141.386 (2)
C4—H40.9300C13—C151.424 (2)
C5—C61.381 (2)C14—O31.3695 (17)
C5—H50.9300C15—C161.334 (2)
C6—H60.9300C15—H150.9300
C7—N11.3004 (17)C16—C171.429 (3)
C7—C91.464 (2)C16—H160.9300
C7—C81.490 (2)C17—O21.213 (2)
C8—H8A0.9600C17—O31.3893 (17)
C8—H8B0.9600N1—H10.952 (15)
C8—H8C0.9600N2—H2A0.92 (2)
C9—C141.4153 (19)N2—H2B0.91 (2)
C6—C1—C2121.01 (14)O1—C10—C9121.51 (13)
C6—C1—N1119.04 (14)C11—C10—C9119.89 (13)
C2—C1—N1119.65 (13)C12—C11—C10120.84 (16)
N2—C2—C1122.62 (14)C12—C11—H11119.6
N2—C2—C3120.05 (15)C10—C11—H11119.6
C1—C2—C3117.31 (14)C11—C12—C13121.61 (15)
C4—C3—C2121.38 (16)C11—C12—H12119.2
C4—C3—H3119.3C13—C12—H12119.2
C2—C3—H3119.3C14—C13—C12118.17 (13)
C3—C4—C5120.51 (15)C14—C13—C15118.01 (16)
C3—C4—H4119.7C12—C13—C15123.82 (16)
C5—C4—H4119.7O3—C14—C13119.53 (13)
C4—C5—C6119.43 (16)O3—C14—C9117.17 (13)
C4—C5—H5120.3C13—C14—C9123.30 (14)
C6—C5—H5120.3C16—C15—C13121.81 (16)
C5—C6—C1120.36 (16)C16—C15—H15119.1
C5—C6—H6119.8C13—C15—H15119.1
C1—C6—H6119.8C15—C16—C17120.82 (15)
N1—C7—C9115.89 (13)C15—C16—H16119.6
N1—C7—C8119.11 (13)C17—C16—H16119.6
C9—C7—C8124.99 (12)O2—C17—O3115.12 (15)
C7—C8—H8A109.5O2—C17—C16128.58 (15)
C7—C8—H8B109.5O3—C17—C16116.29 (16)
H8A—C8—H8B109.5C7—N1—C1126.31 (13)
C7—C8—H8C109.5C7—N1—H1108.9 (11)
H8A—C8—H8C109.5C1—N1—H1124.8 (11)
H8B—C8—H8C109.5C2—N2—H2A118.0 (11)
C14—C9—C10116.18 (13)C2—N2—H2B111.5 (13)
C14—C9—C7123.89 (13)H2A—N2—H2B109.3 (17)
C10—C9—C7119.92 (12)C14—O3—C17123.35 (13)
O1—C10—C11118.60 (14)
C6—C1—C2—N2179.24 (15)C11—C12—C13—C15−179.15 (16)
N1—C1—C2—N2−7.1 (2)C12—C13—C14—O3−178.55 (13)
C6—C1—C2—C31.0 (2)C15—C13—C14—O31.0 (2)
N1—C1—C2—C3174.61 (13)C12—C13—C14—C90.8 (2)
N2—C2—C3—C4−178.25 (16)C15—C13—C14—C9−179.68 (14)
C1—C2—C3—C40.0 (2)C10—C9—C14—O3177.82 (12)
C2—C3—C4—C5−0.5 (3)C7—C9—C14—O3−1.3 (2)
C3—C4—C5—C60.0 (3)C10—C9—C14—C13−1.5 (2)
C4—C5—C6—C11.0 (3)C7—C9—C14—C13179.41 (14)
C2—C1—C6—C5−1.5 (2)C14—C13—C15—C16−1.7 (2)
N1—C1—C6—C5−175.19 (14)C12—C13—C15—C16177.81 (17)
N1—C7—C9—C14174.71 (14)C13—C15—C16—C17−1.0 (3)
C8—C7—C9—C14−6.3 (2)C15—C16—C17—O2−175.59 (18)
N1—C7—C9—C10−4.4 (2)C15—C16—C17—O34.2 (3)
C8—C7—C9—C10174.68 (14)C9—C7—N1—C1−177.28 (14)
C14—C9—C10—O1−178.93 (14)C8—C7—N1—C13.6 (2)
C7—C9—C10—O10.2 (2)C6—C1—N1—C7−112.84 (17)
C14—C9—C10—C111.2 (2)C2—C1—N1—C773.42 (19)
C7—C9—C10—C11−179.71 (14)C13—C14—O3—C172.5 (2)
O1—C10—C11—C12179.96 (15)C9—C14—O3—C17−176.83 (13)
C9—C10—C11—C12−0.1 (2)O2—C17—O3—C14174.78 (14)
C10—C11—C12—C13−0.7 (3)C16—C17—O3—C14−5.1 (2)
C11—C12—C13—C140.4 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.95 (2)1.56 (2)2.4534 (17)155 (2)
N2—H2A···O1i0.92 (2)2.13 (2)2.9933 (19)154.7 (15)
N2—H2B···O2ii0.91 (2)2.37 (2)3.1203 (19)138.7 (17)
C5—H5···O2iii0.932.483.242 (2)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O10.95 (2)1.56 (2)2.4534 (17)155 (2)
N2—H2A⋯O1i0.92 (2)2.13 (2)2.9933 (19)154.7 (15)
N2—H2B⋯O2ii0.91 (2)2.37 (2)3.1203 (19)138.7 (17)
C5—H5⋯O2iii0.932.483.242 (2)139

Symmetry codes: (i) ; (ii) ; (iii) .

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