| Literature DB >> 21587890 |
Thomas Gelbrich1, Mairi F Haddow, Ulrich J Griesser.
Abstract
The crystal structure of the title compound, C(11)H(13)ClF(3)N(3)O(4)S(3) (systematic name: 6-chloro-2-methyl-3-{[(2,2,2-trifluoro-eth-yl)sulfan-yl]meth-yl}-3,4-dihydro-2H-1,2,4-benzothia-diazine-7-sul-f-on-amide 1,1-diox-ide; CRN: 346-18-9), exhibits a two-dimensional network of hydrogen-bonded mol-ecules parallel to (01). The NH and NH(2) groups act as donor sites and the sulfonyl O atoms as acceptor sites in N-H⋯O hydrogen bonds, and a C-H⋯O interaction also occurs. The thiadiazine ring adopts an envelope conformation with the N atom bonded to sulfur at the tip of the flap, and the methyl substituent is in an axial position.Entities:
Year: 2010 PMID: 21587890 PMCID: PMC3006947 DOI: 10.1107/S1600536810022105
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H13ClF3N3O4S3 | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 11202 reflections |
| θ = 2.9–27.5° | |
| µ = 0.64 mm−1 | |
| β = 116.149 (3)° | Plate, colourless |
| 0.12 × 0.10 × 0.06 mm | |
| Bruker-Nonius Roper CCD camera on κ-goniostat diffractometer | 3197 independent reflections |
| Radiation source: Bruker–Nonius FR591 rotating anode | 2768 reflections with |
| graphite | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 26.0°, θmin = 3.3° |
| φ & ω scans | |
| Absorption correction: multi-scan ( | |
| 9021 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3197 reflections | Δρmax = 0.32 e Å−3 |
| 239 parameters | Δρmin = −0.41 e Å−3 |
| 5 restraints | Absolute structure: Flack (1983), 1504 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.12 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.88627 (8) | 0.03391 (10) | 0.90846 (8) | 0.0280 (2) | |
| S1 | 0.94030 (7) | 0.63949 (10) | 0.76867 (7) | 0.0226 (2) | |
| S2 | 0.77245 (7) | 0.12532 (10) | 0.65142 (8) | 0.0241 (2) | |
| S3 | 1.04262 (8) | 0.75479 (12) | 1.17195 (8) | 0.0262 (2) | |
| O1 | 0.9673 (2) | 0.6291 (3) | 0.6804 (2) | 0.0285 (7) | |
| O2 | 0.8556 (2) | 0.7293 (3) | 0.7536 (2) | 0.0272 (7) | |
| O3 | 0.7388 (2) | 0.2033 (3) | 0.5523 (2) | 0.0348 (7) | |
| O4 | 0.6988 (2) | 0.0628 (3) | 0.6808 (2) | 0.0344 (7) | |
| N1 | 1.0394 (2) | 0.6927 (4) | 0.8780 (3) | 0.0228 (7) | |
| N2 | 1.0131 (3) | 0.5322 (3) | 0.9992 (3) | 0.0214 (7) | |
| H1N | 1.043 (4) | 0.502 (6) | 1.067 (2) | 0.052 (16)* | |
| N3 | 0.8417 (3) | −0.0017 (4) | 0.6449 (3) | 0.0255 (8) | |
| H2N | 0.892 (3) | 0.022 (5) | 0.631 (4) | 0.050 (16)* | |
| H3N | 0.856 (4) | −0.066 (4) | 0.696 (3) | 0.041 (15)* | |
| C1 | 1.0167 (3) | 0.6786 (4) | 0.9736 (3) | 0.0233 (9) | |
| H1 | 0.9479 | 0.7195 | 0.9531 | 0.028* | |
| C2 | 0.9619 (3) | 0.4380 (4) | 0.9200 (3) | 0.0192 (8) | |
| C3 | 0.9196 (3) | 0.4722 (4) | 0.8079 (3) | 0.0193 (8) | |
| C4 | 0.8626 (3) | 0.3757 (4) | 0.7286 (3) | 0.0188 (8) | |
| H4 | 0.8328 | 0.4027 | 0.6541 | 0.023* | |
| C5 | 0.8483 (3) | 0.2403 (4) | 0.7563 (3) | 0.0199 (8) | |
| C6 | 0.8960 (3) | 0.2032 (4) | 0.8677 (3) | 0.0192 (8) | |
| C7 | 0.9523 (3) | 0.2976 (4) | 0.9475 (3) | 0.0206 (8) | |
| H7 | 0.9849 | 0.2686 | 1.0215 | 0.025* | |
| C8 | 1.1391 (3) | 0.6397 (5) | 0.8917 (3) | 0.0289 (10) | |
| H8A | 1.1933 | 0.6981 | 0.9447 | 0.043* | |
| H8B | 1.1421 | 0.6430 | 0.8216 | 0.043* | |
| H8C | 1.1480 | 0.5428 | 0.9180 | 0.043* | |
| C9 | 1.0919 (3) | 0.7580 (4) | 1.0712 (3) | 0.0251 (9) | |
| H9A | 1.0985 | 0.8557 | 1.0509 | 0.030* | |
| H9B | 1.1595 | 0.7129 | 1.1004 | 0.030* | |
| C10 | 1.1529 (3) | 0.8004 (6) | 1.2942 (3) | 0.0360 (11) | |
| H10A | 1.1519 | 0.7472 | 1.3558 | 0.043* | |
| H10B | 1.2143 | 0.7715 | 1.2865 | 0.043* | |
| C11 | 1.1605 (4) | 0.9502 (6) | 1.3201 (4) | 0.0438 (13) | |
| F1 | 1.2461 (3) | 0.9823 (5) | 1.4089 (3) | 0.0842 (14) | |
| F2 | 1.1618 (3) | 1.0300 (4) | 1.2398 (3) | 0.0708 (10) | |
| F3 | 1.0838 (2) | 0.9967 (4) | 1.3395 (3) | 0.0656 (10) |
| Cl1 | 0.0427 (6) | 0.0181 (5) | 0.0234 (5) | −0.0054 (4) | 0.0147 (4) | −0.0008 (4) |
| S1 | 0.0297 (5) | 0.0179 (5) | 0.0215 (5) | 0.0026 (4) | 0.0125 (4) | 0.0038 (4) |
| S2 | 0.0276 (5) | 0.0226 (6) | 0.0185 (5) | −0.0012 (5) | 0.0069 (4) | −0.0028 (4) |
| S3 | 0.0322 (5) | 0.0254 (6) | 0.0257 (5) | −0.0050 (4) | 0.0172 (4) | −0.0072 (4) |
| O1 | 0.0404 (17) | 0.0296 (17) | 0.0201 (15) | −0.0011 (13) | 0.0175 (13) | 0.0038 (12) |
| O2 | 0.0278 (15) | 0.0215 (16) | 0.0331 (17) | 0.0057 (13) | 0.0141 (13) | 0.0059 (13) |
| O3 | 0.0458 (18) | 0.0267 (17) | 0.0168 (15) | 0.0028 (14) | 0.0000 (12) | −0.0001 (12) |
| O4 | 0.0300 (16) | 0.0406 (19) | 0.0346 (18) | −0.0126 (15) | 0.0161 (14) | −0.0130 (15) |
| N1 | 0.0321 (19) | 0.0193 (18) | 0.0214 (18) | −0.0022 (15) | 0.0157 (15) | −0.0036 (14) |
| N2 | 0.0327 (18) | 0.0143 (17) | 0.0176 (18) | −0.0026 (14) | 0.0116 (15) | 0.0015 (13) |
| N3 | 0.034 (2) | 0.020 (2) | 0.025 (2) | 0.0027 (16) | 0.0156 (16) | −0.0014 (15) |
| C1 | 0.036 (2) | 0.017 (2) | 0.021 (2) | −0.0040 (18) | 0.0165 (17) | −0.0021 (16) |
| C2 | 0.0214 (19) | 0.019 (2) | 0.017 (2) | 0.0023 (16) | 0.0083 (16) | −0.0020 (16) |
| C3 | 0.024 (2) | 0.016 (2) | 0.019 (2) | 0.0041 (16) | 0.0111 (16) | 0.0020 (16) |
| C4 | 0.0179 (18) | 0.019 (2) | 0.017 (2) | 0.0053 (16) | 0.0061 (15) | 0.0013 (16) |
| C5 | 0.022 (2) | 0.019 (2) | 0.019 (2) | −0.0006 (17) | 0.0092 (17) | −0.0054 (16) |
| C6 | 0.0242 (19) | 0.017 (2) | 0.018 (2) | 0.0004 (16) | 0.0109 (16) | 0.0005 (16) |
| C7 | 0.028 (2) | 0.019 (2) | 0.0131 (19) | −0.0031 (17) | 0.0075 (15) | 0.0003 (15) |
| C8 | 0.021 (2) | 0.041 (3) | 0.025 (2) | 0.0011 (19) | 0.0104 (17) | 0.0052 (19) |
| C9 | 0.032 (2) | 0.023 (2) | 0.021 (2) | 0.0007 (18) | 0.0118 (17) | −0.0009 (17) |
| C10 | 0.033 (2) | 0.054 (3) | 0.020 (2) | 0.004 (2) | 0.0101 (18) | −0.002 (2) |
| C11 | 0.040 (3) | 0.054 (4) | 0.044 (3) | −0.020 (2) | 0.024 (2) | −0.021 (3) |
| F1 | 0.066 (2) | 0.128 (4) | 0.062 (2) | −0.063 (2) | 0.0310 (18) | −0.056 (2) |
| F2 | 0.095 (2) | 0.052 (2) | 0.072 (2) | −0.0414 (19) | 0.043 (2) | −0.0140 (18) |
| F3 | 0.069 (2) | 0.052 (2) | 0.095 (3) | −0.0182 (17) | 0.053 (2) | −0.0440 (19) |
| Cl1—C6 | 1.736 (4) | C2—C3 | 1.415 (5) |
| S1—O1 | 1.429 (3) | C2—C7 | 1.416 (6) |
| S1—O2 | 1.448 (3) | C3—C4 | 1.388 (5) |
| S1—N1 | 1.640 (3) | C4—C5 | 1.390 (5) |
| S1—C3 | 1.753 (4) | C4—H4 | 0.9500 |
| S2—O3 | 1.430 (3) | C5—C6 | 1.412 (5) |
| S2—O4 | 1.437 (3) | C6—C7 | 1.375 (5) |
| S2—N3 | 1.610 (4) | C7—H7 | 0.9500 |
| S2—C5 | 1.759 (4) | C8—H8A | 0.9800 |
| S3—C10 | 1.794 (4) | C8—H8B | 0.9800 |
| S3—C9 | 1.816 (4) | C8—H8C | 0.9800 |
| N1—C8 | 1.480 (5) | C9—H9A | 0.9900 |
| N1—C1 | 1.490 (5) | C9—H9B | 0.9900 |
| N2—C2 | 1.353 (5) | C10—C11 | 1.467 (7) |
| N2—C1 | 1.447 (5) | C10—H10A | 0.9900 |
| N2—H1N | 0.88 (2) | C10—H10B | 0.9900 |
| N3—H2N | 0.87 (2) | C11—F3 | 1.340 (6) |
| N3—H3N | 0.884 (19) | C11—F2 | 1.343 (6) |
| C1—C9 | 1.508 (5) | C11—F1 | 1.343 (6) |
| C1—H1 | 1.0000 | ||
| O1—S1—O2 | 117.39 (17) | C3—C4—H4 | 119.5 |
| O1—S1—N1 | 109.12 (17) | C5—C4—H4 | 119.5 |
| O2—S1—N1 | 107.83 (17) | C4—C5—C6 | 117.7 (3) |
| O1—S1—C3 | 110.15 (18) | C4—C5—S2 | 118.4 (3) |
| O2—S1—C3 | 109.29 (18) | C6—C5—S2 | 123.9 (3) |
| N1—S1—C3 | 101.91 (18) | C7—C6—C5 | 122.0 (4) |
| O3—S2—O4 | 119.56 (19) | C7—C6—Cl1 | 117.5 (3) |
| O3—S2—N3 | 107.61 (19) | C5—C6—Cl1 | 120.5 (3) |
| O4—S2—N3 | 105.8 (2) | C6—C7—C2 | 120.3 (3) |
| O3—S2—C5 | 106.11 (18) | C6—C7—H7 | 119.8 |
| O4—S2—C5 | 108.34 (18) | C2—C7—H7 | 119.8 |
| N3—S2—C5 | 109.11 (19) | N1—C8—H8A | 109.5 |
| C10—S3—C9 | 101.8 (2) | N1—C8—H8B | 109.5 |
| C8—N1—C1 | 116.6 (3) | H8A—C8—H8B | 109.5 |
| C8—N1—S1 | 116.0 (3) | N1—C8—H8C | 109.5 |
| C1—N1—S1 | 108.8 (2) | H8A—C8—H8C | 109.5 |
| C2—N2—C1 | 121.0 (3) | H8B—C8—H8C | 109.5 |
| C2—N2—H1N | 118 (4) | C1—C9—S3 | 106.4 (3) |
| C1—N2—H1N | 121 (4) | C1—C9—H9A | 110.5 |
| S2—N3—H2N | 116 (4) | S3—C9—H9A | 110.5 |
| S2—N3—H3N | 115 (3) | C1—C9—H9B | 110.5 |
| H2N—N3—H3N | 115 (5) | S3—C9—H9B | 110.5 |
| N2—C1—N1 | 110.2 (3) | H9A—C9—H9B | 108.6 |
| N2—C1—C9 | 111.2 (3) | C11—C10—S3 | 113.7 (4) |
| N1—C1—C9 | 111.8 (3) | C11—C10—H10A | 108.8 |
| N2—C1—H1 | 107.8 | S3—C10—H10A | 108.8 |
| N1—C1—H1 | 107.8 | C11—C10—H10B | 108.8 |
| C9—C1—H1 | 107.8 | S3—C10—H10B | 108.8 |
| N2—C2—C3 | 122.5 (4) | H10A—C10—H10B | 107.7 |
| N2—C2—C7 | 120.1 (3) | F3—C11—F2 | 106.8 (5) |
| C3—C2—C7 | 117.3 (3) | F3—C11—F1 | 106.1 (4) |
| C4—C3—C2 | 121.2 (4) | F2—C11—F1 | 105.4 (4) |
| C4—C3—S1 | 119.5 (3) | F3—C11—C10 | 113.0 (4) |
| C2—C3—S1 | 119.3 (3) | F2—C11—C10 | 112.5 (4) |
| C3—C4—C5 | 121.1 (3) | F1—C11—C10 | 112.5 (5) |
| H··· | ||||
| N2—H1N···O4i | 0.88 (2) | 2.21 (4) | 2.906 (4) | 135 (4) |
| N2—H1N···O1ii | 0.88 (2) | 2.59 (4) | 3.230 (4) | 130 (4) |
| N3—H3N···O2iii | 0.88 (2) | 2.11 (3) | 2.929 (5) | 154 (5) |
| C10—H10B···O2iv | 0.99 | 2.31 | 3.267 (5) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.88 (2) | 2.21 (4) | 2.906 (4) | 135 (4) |
| N2—H1 | 0.88 (2) | 2.59 (4) | 3.230 (4) | 130 (4) |
| N3—H3 | 0.88 (2) | 2.11 (3) | 2.929 (5) | 154 (5) |
| C10—H10 | 0.99 | 2.31 | 3.267 (5) | 163 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .