Literature DB >> 21202618

Chloro-thia-zide-pyridine (1/3).

Andrea Johnston, Alastair J Florence, Alan R Kennedy.   

Abstract

In the title compound, C(7)H(6)ClN(3)O(4)S(2)·3C(5)H(5)N, (systematic name: 6-chloro-2H-1,2,4-benzothia-diazine-7-sulfonamide 1,1-dioxide pyridine tris-olvate), chloro-thia-zide forms a 1:3 solvate with pyridine. The crystal structure is stabilized by strong inter-molecular N-H⋯N hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202618      PMCID: PMC2961452          DOI: 10.1107/S1600536808014360

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details on experimental methods used to obtain this form, see: Florence et al. (2003 ▶, 2006 ▶). For previous studies on the non-solvated form of chloro­thaizide, see: Dupont & Dideberg (1970 ▶); Shankland et al. (1997 ▶). For solvated forms see: Johnston et al. (2007a ▶,b ▶); Johnston, Florence & Kennedy (2007 ▶); Fernandes, Florence et al. (2006 ▶); Fernandes, Shankland et al. (2007 ▶). For studies of inter­molecular inter­actions in the related thia­zide diuretic, hydro­chloro­thia­zide, see: Johnston, Florence, Shankland et al. (2007 ▶). For additional literature on related thia­zide compounds, see: Fabbiani et al. (2007 ▶); Fernandes, Johnston et al. (2007 ▶); Fernandes, Leech et al. (2007 ▶).

Experimental

Crystal data

C7H6ClN3O4S2·3C5H5N M = 533.02 Triclinic, a = 9.0697 (15) Å b = 11.863 (2) Å c = 11.875 (2) Å α = 100.691 (7)° β = 98.667 (8)° γ = 98.134 (7)° V = 1222.1 (4) Å3 Z = 2 Mo Kα radiation μ = 0.37 mm−1 T = 123 (2) K 0.18 × 0.10 × 0.05 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 14598 measured reflections 4219 independent reflections 2998 reflections with I > 2σ(I) R int = 0.085

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.103 S = 1.04 4219 reflections 328 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.49 e Å−3 Data collection: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT (Hooft, 1998 ▶); cell refinement: DENZO and COLLECT; data reduction: DENZO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808014360/bx2144sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014360/bx2144Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H6ClN3O4S2·3C5H5NZ = 2
Mr = 533.02F000 = 552
Triclinic, P1Dx = 1.448 Mg m3
Hall symbol: P -1Mo Kα radiation λ = 0.71073 Å
a = 9.0697 (15) ÅCell parameters from 3968 reflections
b = 11.863 (2) Åθ = 1.0–27.1º
c = 11.875 (2) ŵ = 0.37 mm1
α = 100.691 (7)ºT = 123 (2) K
β = 98.667 (8)ºCut fragment, colourless
γ = 98.134 (7)º0.18 × 0.10 × 0.05 mm
V = 1222.1 (4) Å3
Nonius KappaCCD diffractometer2998 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.085
Monochromator: graphiteθmax = 25.3º
T = 123(2) Kθmin = 1.8º
φ and ω scansh = −10→0
Absorption correction: nonek = −13→14
14598 measured reflectionsl = −13→14
4219 independent reflections
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.0253P)2 + 1.8286P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.059(Δ/σ)max < 0.001
wR(F2) = 0.103Δρmax = 0.34 e Å3
S = 1.04Δρmin = −0.49 e Å3
4219 reflectionsExtinction correction: none
328 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.11042 (9)0.34675 (7)0.54702 (7)0.0161 (2)
S10.24543 (9)−0.02698 (7)0.33227 (7)0.0127 (2)
S2−0.16390 (10)0.25714 (7)0.26176 (7)0.0134 (2)
O30.3649 (3)0.0349 (2)0.2890 (2)0.0213 (6)
O10.1454 (3)−0.1213 (2)0.2501 (2)0.0230 (6)
O2−0.1320 (3)0.20934 (19)0.14895 (19)0.0185 (6)
O4−0.3120 (2)0.2257 (2)0.28715 (19)0.0197 (6)
N30.3205 (3)−0.0768 (2)0.4406 (2)0.0145 (7)
N20.2459 (3)0.0587 (2)0.5857 (3)0.0121 (7)
N1−0.1235 (4)0.3939 (3)0.2847 (3)0.0178 (7)
C30.3177 (4)−0.0285 (3)0.5481 (3)0.0137 (8)
H30.3730−0.05870.60680.016*
C20.1548 (3)0.1084 (3)0.5117 (3)0.0093 (7)
C70.1389 (3)0.0736 (3)0.3908 (3)0.0098 (7)
C10.0429 (3)0.1218 (3)0.3176 (3)0.0101 (7)
H10.03200.09680.23560.012*
C5−0.0367 (3)0.2054 (3)0.3622 (3)0.0098 (7)
C6−0.0171 (4)0.2406 (3)0.4846 (3)0.0108 (8)
C40.0752 (4)0.1928 (3)0.5575 (3)0.0103 (7)
H40.08510.21730.63960.012*
N1S0.7057 (3)0.5432 (2)0.4150 (3)0.0195 (7)
C1S0.6985 (4)0.5848 (3)0.5263 (3)0.0202 (9)
H1S0.76240.56080.58500.024*
C2S0.6037 (4)0.6605 (3)0.5610 (3)0.0242 (9)
H2S0.60200.68700.64130.029*
C3S0.5120 (4)0.6967 (3)0.4769 (4)0.0291 (10)
H3S0.44690.75000.49810.035*
C4S0.5158 (4)0.6547 (3)0.3615 (4)0.0308 (10)
H4S0.45200.67690.30140.037*
C5S0.6150 (4)0.5793 (3)0.3352 (3)0.0255 (9)
H5S0.61860.55160.25550.031*
N2S0.2984 (3)0.1270 (2)0.8267 (2)0.0200 (7)
C6S0.2000 (4)0.1232 (3)0.9002 (3)0.0237 (9)
H6S0.09530.11600.86980.028*
C7S0.2439 (5)0.1292 (3)1.0180 (3)0.0335 (11)
H7S0.17050.12461.06690.040*
C8S0.3955 (5)0.1419 (3)1.0634 (3)0.0319 (11)
H8S0.42880.14671.14410.038*
C9S0.4979 (4)0.1475 (3)0.9891 (3)0.0263 (10)
H9S0.60350.15701.01770.032*
C10S0.4444 (4)0.1391 (3)0.8729 (3)0.0237 (9)
H10S0.51590.14200.82230.028*
N3S0.1270 (3)0.4933 (3)0.1813 (3)0.0245 (8)
C11S0.2125 (4)0.4257 (3)0.1287 (3)0.0302 (10)
H11S0.22210.35420.15170.036*
C12S0.2882 (4)0.4540 (4)0.0421 (3)0.0336 (10)
H12S0.34860.40340.00710.040*
C13S0.2739 (4)0.5576 (4)0.0079 (3)0.0313 (10)
H13S0.32330.5792−0.05200.038*
C14S0.1872 (4)0.6288 (3)0.0617 (3)0.0261 (9)
H14S0.17600.70080.04030.031*
C15S0.1165 (4)0.5939 (3)0.1478 (3)0.0222 (9)
H15S0.05730.64400.18510.027*
H20.261 (4)0.083 (3)0.665 (3)0.034 (12)*
H5−0.166 (4)0.433 (3)0.334 (3)0.036 (13)*
H6−0.046 (4)0.420 (3)0.262 (3)0.014 (10)*
U11U22U33U12U13U23
Cl10.0195 (5)0.0159 (5)0.0153 (5)0.0021 (4)0.0067 (4)0.0090 (4)
S10.0133 (5)0.0150 (5)0.0108 (5)0.0021 (4)0.0024 (4)0.0065 (4)
S20.0141 (5)0.0152 (5)0.0120 (5)0.0059 (4)−0.0002 (4)0.0045 (4)
O30.0187 (14)0.0303 (15)0.0237 (15)0.0147 (12)0.0141 (12)0.0108 (11)
O10.0245 (15)0.0209 (14)0.0180 (14)−0.0067 (11)−0.0053 (11)0.0089 (11)
O20.0274 (14)0.0209 (14)0.0083 (13)0.0029 (10)0.0014 (11)0.0101 (11)
O40.0137 (13)0.0261 (14)0.0191 (14)0.0106 (11)−0.0027 (11)0.0014 (11)
N30.0125 (16)0.0176 (16)0.0158 (18)0.0070 (13)0.0019 (13)0.0067 (13)
N20.0136 (16)0.0164 (16)0.0066 (18)0.0049 (13)−0.0016 (13)0.0037 (13)
N10.0214 (19)0.0163 (17)0.022 (2)0.0100 (14)0.0121 (16)0.0064 (15)
C30.0083 (18)0.0125 (18)0.020 (2)0.0083 (16)0.0000 (16)−0.0016 (15)
C20.0046 (17)0.0105 (17)0.012 (2)0.0037 (14)0.0000 (15)−0.0015 (14)
C70.0072 (18)0.0103 (17)0.011 (2)0.0013 (14)0.0008 (15)−0.0012 (14)
C10.0107 (18)0.0127 (17)0.0054 (19)0.0002 (14)0.0006 (15)−0.0001 (14)
C50.0070 (18)0.0113 (18)0.010 (2)0.0038 (14)−0.0009 (15)−0.0006 (14)
C60.0084 (18)0.0083 (17)0.016 (2)0.0009 (14)0.0062 (15)0.0008 (14)
C40.0108 (18)0.0115 (17)0.0081 (19)0.0037 (14)0.0016 (15)−0.0013 (14)
N1S0.0182 (17)0.0141 (16)0.026 (2)0.0021 (14)0.0053 (15)0.0029 (13)
C1S0.020 (2)0.016 (2)0.024 (2)0.0078 (17)−0.0011 (17)−0.0004 (16)
C2S0.022 (2)0.018 (2)0.032 (2)0.0007 (17)0.0116 (19)−0.0018 (17)
C3S0.015 (2)0.012 (2)0.060 (3)0.004 (2)0.009 (2)0.0043 (17)
C4S0.019 (2)0.026 (2)0.044 (3)0.017 (2)−0.011 (2)−0.0025 (18)
C5S0.028 (2)0.023 (2)0.023 (2)0.0068 (18)0.0018 (19)−0.0024 (18)
N2S0.0232 (19)0.0243 (18)0.0105 (17)0.0013 (13)−0.0039 (15)0.0077 (14)
C6S0.018 (2)0.021 (2)0.026 (3)−0.0027 (17)0.0002 (18)−0.0032 (17)
C7S0.042 (3)0.034 (2)0.021 (3)0.0019 (18)0.017 (2)−0.011 (2)
C8S0.053 (3)0.025 (2)0.012 (2)0.0080 (17)−0.002 (2)−0.006 (2)
C9S0.027 (2)0.022 (2)0.025 (3)0.0052 (17)−0.011 (2)0.0027 (18)
C10S0.024 (2)0.029 (2)0.019 (2)0.0038 (17)0.0054 (19)0.0084 (18)
N3S0.031 (2)0.0234 (18)0.0208 (19)0.0043 (14)0.0106 (15)0.0060 (15)
C11S0.038 (3)0.024 (2)0.031 (3)0.0078 (18)0.008 (2)0.0084 (19)
C12S0.036 (3)0.041 (3)0.029 (3)0.007 (2)0.016 (2)0.012 (2)
C13S0.033 (2)0.043 (3)0.019 (2)0.009 (2)0.011 (2)−0.001 (2)
C14S0.033 (2)0.024 (2)0.021 (2)0.0096 (17)0.0016 (19)0.0002 (19)
C15S0.026 (2)0.020 (2)0.019 (2)0.0021 (17)0.0019 (18)0.0035 (17)
Cl1—C61.730 (3)C2S—H2S0.9500
S1—O31.435 (2)C3S—C4S1.376 (6)
S1—O11.439 (2)C3S—H3S0.9500
S1—N31.613 (3)C4S—C5S1.384 (5)
S1—C71.749 (3)C4S—H4S0.9500
S2—O41.434 (2)C5S—H5S0.9500
S2—O21.443 (2)N2S—C10S1.332 (4)
S2—N11.575 (3)N2S—C6S1.340 (4)
S2—C51.785 (3)C6S—C7S1.381 (5)
N3—C31.304 (4)C6S—H6S0.9500
N2—C31.342 (4)C7S—C8S1.376 (5)
N2—C21.383 (4)C7S—H7S0.9500
N2—H20.91 (4)C8S—C9S1.377 (5)
N1—H50.85 (4)C8S—H8S0.9500
N1—H60.83 (3)C9S—C10S1.372 (5)
C3—H30.9500C9S—H9S0.9500
C2—C41.393 (4)C10S—H10S0.9500
C2—C71.398 (4)N3S—C11S1.330 (5)
C7—C11.392 (4)N3S—C15S1.338 (4)
C1—C51.381 (4)C11S—C12S1.384 (5)
C1—H10.9500C11S—H11S0.9500
C5—C61.413 (4)C12S—C13S1.381 (5)
C6—C41.368 (4)C12S—H12S0.9500
C4—H40.9500C13S—C14S1.371 (5)
N1S—C5S1.331 (5)C13S—H13S0.9500
N1S—C1S1.337 (4)C14S—C15S1.381 (5)
C1S—C2S1.380 (5)C14S—H14S0.9500
C1S—H1S0.9500C15S—H15S0.9500
C2S—C3S1.372 (5)
?···??
O3—S1—O1116.53 (15)C3S—C2S—C1S118.5 (4)
O3—S1—N3108.29 (14)C3S—C2S—H2S120.8
O1—S1—N3108.71 (14)C1S—C2S—H2S120.8
O3—S1—C7108.12 (14)C2S—C3S—C4S119.0 (4)
O1—S1—C7109.09 (14)C2S—C3S—H3S120.5
N3—S1—C7105.55 (15)C4S—C3S—H3S120.5
O4—S2—O2119.51 (14)C3S—C4S—C5S118.3 (4)
O4—S2—N1108.62 (17)C3S—C4S—H4S120.8
O2—S2—N1108.54 (16)C5S—C4S—H4S120.8
O4—S2—C5106.13 (14)N1S—C5S—C4S124.0 (4)
O2—S2—C5104.48 (14)N1S—C5S—H5S118.0
N1—S2—C5109.16 (16)C4S—C5S—H5S118.0
C3—N3—S1121.8 (2)C10S—N2S—C6S116.7 (3)
C3—N2—C2123.4 (3)N2S—C6S—C7S123.0 (4)
C3—N2—H2115 (2)N2S—C6S—H6S118.5
C2—N2—H2122 (2)C7S—C6S—H6S118.5
S2—N1—H5118 (3)C8S—C7S—C6S119.0 (4)
S2—N1—H6115 (2)C8S—C7S—H7S120.5
H5—N1—H6125 (3)C6S—C7S—H7S120.5
N3—C3—N2127.6 (3)C7S—C8S—C9S118.5 (4)
N3—C3—H3116.2C7S—C8S—H8S120.7
N2—C3—H3116.2C9S—C8S—H8S120.7
N2—C2—C4120.0 (3)C10S—C9S—C8S118.6 (4)
N2—C2—C7120.9 (3)C10S—C9S—H9S120.7
C4—C2—C7119.1 (3)C8S—C9S—H9S120.7
C1—C7—C2120.1 (3)N2S—C10S—C9S124.1 (3)
C1—C7—S1120.3 (2)N2S—C10S—H10S118.0
C2—C7—S1119.6 (2)C9S—C10S—H10S118.0
C5—C1—C7121.2 (3)C11S—N3S—C15S116.9 (3)
C5—C1—H1119.4N3S—C11S—C12S123.5 (4)
C7—C1—H1119.4N3S—C11S—H11S118.2
C1—C5—C6117.7 (3)C12S—C11S—H11S118.2
C1—C5—S2118.0 (2)C13S—C12S—C11S118.4 (4)
C6—C5—S2124.2 (2)C13S—C12S—H12S120.8
C4—C6—C5121.7 (3)C11S—C12S—H12S120.8
C4—C6—Cl1117.8 (2)C14S—C13S—C12S118.9 (3)
C5—C6—Cl1120.5 (2)C14S—C13S—H13S120.6
C6—C4—C2120.1 (3)C12S—C13S—H13S120.6
C6—C4—H4119.9C13S—C14S—C15S118.7 (3)
C2—C4—H4119.9C13S—C14S—H14S120.6
C5S—N1S—C1S116.3 (3)C15S—C14S—H14S120.6
N1S—C1S—C2S124.0 (3)N3S—C15S—C14S123.4 (3)
N1S—C1S—H1S118.0N3S—C15S—H15S118.3
C2S—C1S—H1S118.0C14S—C15S—H15S118.3
O3—S1—N3—C3104.1 (3)C1—C5—C6—C4−1.1 (4)
O1—S1—N3—C3−128.4 (3)S2—C5—C6—C4176.0 (2)
C7—S1—N3—C3−11.5 (3)C1—C5—C6—Cl1178.9 (2)
S1—N3—C3—N25.9 (5)S2—C5—C6—Cl1−4.1 (4)
C2—N2—C3—N33.1 (5)C5—C6—C4—C20.9 (5)
C3—N2—C2—C4175.3 (3)Cl1—C6—C4—C2−179.0 (2)
C3—N2—C2—C7−3.5 (5)N2—C2—C4—C6−178.8 (3)
N2—C2—C7—C1177.9 (3)C7—C2—C4—C60.0 (4)
C4—C2—C7—C1−0.9 (4)C5S—N1S—C1S—C2S0.4 (5)
N2—C2—C7—S1−4.4 (4)N1S—C1S—C2S—C3S−0.7 (5)
C4—C2—C7—S1176.8 (2)C1S—C2S—C3S—C4S1.2 (5)
O3—S1—C7—C172.7 (3)C2S—C3S—C4S—C5S−1.4 (5)
O1—S1—C7—C1−54.9 (3)C1S—N1S—C5S—C4S−0.6 (5)
N3—S1—C7—C1−171.6 (2)C3S—C4S—C5S—N1S1.1 (5)
O3—S1—C7—C2−105.0 (3)C10S—N2S—C6S—C7S−1.1 (5)
O1—S1—C7—C2127.4 (3)N2S—C6S—C7S—C8S1.3 (6)
N3—S1—C7—C210.7 (3)C6S—C7S—C8S—C9S−0.4 (6)
C2—C7—C1—C50.8 (4)C7S—C8S—C9S—C10S−0.6 (5)
S1—C7—C1—C5−176.9 (2)C6S—N2S—C10S—C9S0.0 (5)
C7—C1—C5—C60.2 (4)C8S—C9S—C10S—N2S0.8 (6)
C7—C1—C5—S2−177.0 (2)C15S—N3S—C11S—C12S−0.5 (6)
O4—S2—C5—C1117.4 (2)N3S—C11S—C12S—C13S−0.4 (6)
O2—S2—C5—C1−9.8 (3)C11S—C12S—C13S—C14S0.8 (6)
N1—S2—C5—C1−125.7 (3)C12S—C13S—C14S—C15S−0.4 (6)
O4—S2—C5—C6−59.7 (3)C11S—N3S—C15S—C14S0.9 (5)
O2—S2—C5—C6173.2 (3)C13S—C14S—C15S—N3S−0.5 (6)
N1—S2—C5—C657.2 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2···N2S0.91 (4)1.86 (4)2.774 (4)177 (4)
N1—H5···N1Si0.85 (4)2.07 (4)2.900 (4)165 (4)
N1—H6···N3S0.83 (3)2.13 (4)2.946 (4)170 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯N2S0.91 (4)1.86 (4)2.774 (4)177 (4)
N1—H5⋯N1Si0.85 (4)2.07 (4)2.900 (4)165 (4)
N1—H6⋯N3S0.83 (3)2.13 (4)2.946 (4)170 (3)

Symmetry code: (i) .

  4 in total

1.  Indexing powder patterns in physical form screening: instrumentation and data quality.

Authors:  Alastair J Florence; Bruno Baumgartner; Chris Weston; Norman Shankland; Alan R Kennedy; Kenneth Shankland; William I F David
Journal:  J Pharm Sci       Date:  2003-09       Impact factor: 3.534

2.  Hirshfeld surface analysis of two bendroflumethiazide solvates.

Authors:  Francesca P A Fabbiani; Charlotte K Leech; Kenneth Shankland; Andrea Johnston; Philippe Fernandes; Alastair J Florence; Norman Shankland
Journal:  Acta Crystallogr C       Date:  2007-10-24       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Solving molecular crystal structures from X-ray powder diffraction data: the challenges posed by gamma-carbamazepine and chlorothiazide N,N,-dimethylformamide (1/2) solvate.

Authors:  Philippe Fernandes; Kenneth Shankland; Alastair J Florence; Norman Shankland; Andrea Johnston
Journal:  J Pharm Sci       Date:  2007-05       Impact factor: 3.534

  4 in total
  1 in total

1.  Polythia-zide.

Authors:  Thomas Gelbrich; Mairi F Haddow; Ulrich J Griesser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16
  1 in total

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