Literature DB >> 21587821

8-Meth-oxy-3,3,5-trimethyl-3,11-dihydro-pyrano[3,2-a]carbazole.

C Uvarani, P Ramesh, K Ravichandran, P S Mohan, M N Ponnuswamy.   

Abstract

In the title compound, C(19)H(19)NO(2), commonly called koenimbine, the pyran ring adopts a sofa conformation. The carbazole ring system is planar [r.m.s. deviation = 0.063 (1) Å]. A C(10) zigzag chain running along the b axis is formed through inter-molecular C-H⋯O hydrogen bonds. The chains are linked via weak C-H⋯π and N-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21587821      PMCID: PMC3006796          DOI: 10.1107/S160053681002074X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For the bio­logical activity of carbazole derivatives, see: Kong et al. (1986 ▶); Ito (2000 ▶); Ramsewak et al. (1999 ▶); Chowdhury et al. (2001 ▶); Fiebi et al. (1985 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For asymmetry parameters, see: Nardelli (1983 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C19H19NO2 M = 293.35 Monoclinic, a = 8.290 (5) Å b = 8.693 (5) Å c = 21.326 (5) Å β = 90.742 (5)° V = 1536.7 (13) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.17 × 0.16 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.984, T max = 0.987 14325 measured reflections 3803 independent reflections 3050 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.137 S = 1.05 3803 reflections 207 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.24 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681002074X/sj5011sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681002074X/sj5011Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H19NO2F(000) = 624
Mr = 293.35Dx = 1.268 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1546 reflections
a = 8.290 (5) Åθ = 1.9–28.3°
b = 8.693 (5) ŵ = 0.08 mm1
c = 21.326 (5) ÅT = 293 K
β = 90.742 (5)°Block, colorless
V = 1536.7 (13) Å30.20 × 0.17 × 0.16 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer3803 independent reflections
Radiation source: fine-focus sealed tube3050 reflections with I > 2σ(I)
graphiteRint = 0.026
ω and φ scansθmax = 28.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −9→11
Tmin = 0.984, Tmax = 0.987k = −9→11
14325 measured reflectionsl = −28→28
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0713P)2 + 0.2629P] where P = (Fo2 + 2Fc2)/3
3803 reflections(Δ/σ)max = 0.004
207 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.12605 (11)0.25969 (10)0.57699 (4)0.0444 (2)
O20.32475 (14)0.26609 (14)0.86787 (5)0.0676 (3)
N10.93165 (14)0.40700 (14)0.78439 (5)0.0436 (3)
C20.78388 (15)0.37981 (14)0.81195 (6)0.0396 (3)
C30.72718 (17)0.42649 (16)0.87003 (6)0.0468 (3)
H30.79110.48510.89710.056*
C40.57398 (18)0.38336 (16)0.88612 (6)0.0487 (3)
H40.53380.41340.92480.058*
C50.47677 (16)0.29541 (15)0.84589 (6)0.0451 (3)
C60.53268 (16)0.24753 (14)0.78823 (6)0.0407 (3)
H60.46840.18830.76160.049*
C70.68785 (15)0.29046 (14)0.77121 (5)0.0368 (3)
C80.78297 (14)0.26342 (13)0.71591 (5)0.0360 (3)
C90.75455 (14)0.18608 (15)0.65939 (6)0.0381 (3)
H90.65790.13370.65320.046*
C100.86873 (15)0.18656 (14)0.61251 (5)0.0381 (3)
C111.01461 (15)0.26595 (13)0.62376 (6)0.0364 (3)
C121.25668 (16)0.37274 (16)0.57659 (7)0.0472 (3)
C131.31224 (18)0.40802 (18)0.64208 (8)0.0561 (4)
H131.41900.43680.64920.067*
C141.21332 (16)0.39936 (17)0.69017 (7)0.0493 (3)
H141.24710.43190.72980.059*
C151.05153 (14)0.33853 (14)0.68064 (6)0.0377 (3)
C160.93148 (14)0.33859 (14)0.72584 (5)0.0369 (3)
C170.23594 (19)0.1452 (2)0.84007 (8)0.0625 (4)
H17A0.21610.16810.79660.094*
H17B0.13500.13380.86110.094*
H17C0.29630.05120.84350.094*
C180.83971 (18)0.10395 (18)0.55133 (6)0.0512 (3)
H18A0.89710.00810.55170.077*
H18B0.87710.16650.51740.077*
H18C0.72640.08460.54590.077*
C191.38727 (19)0.2969 (2)0.53819 (8)0.0624 (4)
H19A1.42050.20290.55820.094*
H19B1.47800.36500.53520.094*
H19C1.34590.27470.49690.094*
C201.1956 (2)0.5186 (2)0.54519 (9)0.0694 (5)
H20A1.16330.49620.50280.104*
H20B1.28000.59430.54520.104*
H20C1.10490.55770.56780.104*
H11.005 (2)0.469 (2)0.7994 (8)0.063 (5)*
U11U22U33U12U13U23
O10.0402 (5)0.0453 (5)0.0480 (5)−0.0053 (4)0.0115 (4)−0.0031 (4)
O20.0550 (7)0.0727 (8)0.0759 (7)−0.0199 (5)0.0296 (6)−0.0240 (6)
N10.0379 (6)0.0484 (6)0.0446 (6)−0.0083 (5)0.0010 (4)−0.0095 (5)
C20.0392 (7)0.0376 (6)0.0421 (6)−0.0015 (5)0.0011 (5)−0.0026 (5)
C30.0519 (8)0.0456 (7)0.0431 (6)−0.0064 (6)0.0028 (5)−0.0091 (5)
C40.0566 (8)0.0456 (7)0.0443 (6)−0.0036 (6)0.0118 (6)−0.0081 (5)
C50.0427 (7)0.0412 (7)0.0516 (7)−0.0026 (5)0.0115 (6)−0.0022 (5)
C60.0379 (7)0.0389 (6)0.0454 (6)−0.0027 (5)0.0032 (5)−0.0035 (5)
C70.0363 (6)0.0348 (6)0.0392 (6)0.0008 (5)0.0012 (5)−0.0017 (5)
C80.0325 (6)0.0352 (6)0.0402 (6)−0.0010 (4)0.0010 (4)0.0000 (4)
C90.0320 (6)0.0406 (6)0.0419 (6)−0.0044 (5)0.0003 (5)−0.0033 (5)
C100.0371 (6)0.0372 (6)0.0400 (6)−0.0011 (5)0.0007 (5)−0.0031 (5)
C110.0335 (6)0.0343 (6)0.0416 (6)0.0012 (4)0.0049 (5)0.0017 (5)
C120.0375 (7)0.0454 (7)0.0589 (8)−0.0043 (5)0.0118 (6)0.0042 (6)
C130.0379 (7)0.0620 (9)0.0686 (9)−0.0139 (6)0.0062 (6)−0.0086 (7)
C140.0383 (7)0.0537 (8)0.0558 (7)−0.0093 (6)0.0009 (6)−0.0077 (6)
C150.0331 (6)0.0359 (6)0.0443 (6)−0.0015 (5)0.0004 (5)−0.0009 (5)
C160.0343 (6)0.0356 (6)0.0409 (6)−0.0012 (4)−0.0012 (5)−0.0016 (5)
C170.0472 (9)0.0626 (10)0.0781 (11)−0.0123 (7)0.0114 (7)−0.0048 (8)
C180.0496 (8)0.0590 (9)0.0450 (7)−0.0091 (6)0.0049 (6)−0.0127 (6)
C190.0458 (8)0.0706 (10)0.0714 (10)0.0002 (7)0.0205 (7)0.0012 (8)
C200.0619 (10)0.0536 (9)0.0931 (12)−0.0001 (8)0.0121 (9)0.0182 (9)
O1—C111.3693 (15)C10—C181.5059 (17)
O1—C121.4625 (17)C11—C151.3977 (17)
O2—C51.3741 (18)C12—C131.497 (2)
O2—C171.410 (2)C12—C191.517 (2)
N1—C161.3830 (16)C12—C201.518 (2)
N1—C21.3859 (18)C13—C141.323 (2)
N1—H10.872 (18)C13—H130.9300
C2—C31.3911 (18)C14—C151.4535 (19)
C2—C71.4050 (17)C14—H140.9300
C3—C41.372 (2)C15—C161.3945 (18)
C3—H30.9300C17—H17A0.9600
C4—C51.397 (2)C17—H17B0.9600
C4—H40.9300C17—H17C0.9600
C5—C61.3838 (18)C18—H18A0.9600
C6—C71.3920 (19)C18—H18B0.9600
C6—H60.9300C18—H18C0.9600
C7—C81.4463 (17)C19—H19A0.9600
C8—C91.3975 (16)C19—H19B0.9600
C8—C161.4075 (18)C19—H19C0.9600
C9—C101.3856 (17)C20—H20A0.9600
C9—H90.9300C20—H20B0.9600
C10—C111.4102 (18)C20—H20C0.9600
C11—O1—C12118.95 (10)C13—C12—C20109.71 (14)
C5—O2—C17118.11 (12)C19—C12—C20111.18 (13)
C16—N1—C2108.60 (10)C14—C13—C12121.68 (13)
C16—N1—H1126.3 (11)C14—C13—H13119.2
C2—N1—H1124.4 (11)C12—C13—H13119.2
N1—C2—C3129.69 (12)C13—C14—C15119.48 (13)
N1—C2—C7109.20 (11)C13—C14—H14120.3
C3—C2—C7121.11 (12)C15—C14—H14120.3
C4—C3—C2117.87 (12)C16—C15—C11116.73 (11)
C4—C3—H3121.1C16—C15—C14124.66 (12)
C2—C3—H3121.1C11—C15—C14118.49 (11)
C3—C4—C5121.62 (12)N1—C16—C15129.19 (11)
C3—C4—H4119.2N1—C16—C8109.03 (11)
C5—C4—H4119.2C15—C16—C8121.78 (11)
O2—C5—C6124.51 (13)O2—C17—H17A109.5
O2—C5—C4114.60 (12)O2—C17—H17B109.5
C6—C5—C4120.87 (13)H17A—C17—H17B109.5
C5—C6—C7118.19 (12)O2—C17—H17C109.5
C5—C6—H6120.9H17A—C17—H17C109.5
C7—C6—H6120.9H17B—C17—H17C109.5
C6—C7—C2120.34 (12)C10—C18—H18A109.5
C6—C7—C8133.19 (11)C10—C18—H18B109.5
C2—C7—C8106.47 (11)H18A—C18—H18B109.5
C9—C8—C16119.37 (11)C10—C18—H18C109.5
C9—C8—C7133.94 (11)H18A—C18—H18C109.5
C16—C8—C7106.68 (10)H18B—C18—H18C109.5
C10—C9—C8120.78 (11)C12—C19—H19A109.5
C10—C9—H9119.6C12—C19—H19B109.5
C8—C9—H9119.6H19A—C19—H19B109.5
C9—C10—C11118.11 (11)C12—C19—H19C109.5
C9—C10—C18121.38 (11)H19A—C19—H19C109.5
C11—C10—C18120.51 (11)H19B—C19—H19C109.5
O1—C11—C15120.52 (11)C12—C20—H20A109.5
O1—C11—C10116.22 (11)C12—C20—H20B109.5
C15—C11—C10123.10 (11)H20A—C20—H20B109.5
O1—C12—C13110.56 (11)C12—C20—H20C109.5
O1—C12—C19104.16 (12)H20A—C20—H20C109.5
C13—C12—C19112.32 (13)H20B—C20—H20C109.5
O1—C12—C20108.74 (12)
C16—N1—C2—C3−179.35 (13)C9—C10—C11—O1178.11 (11)
C16—N1—C2—C71.02 (15)C18—C10—C11—O1−1.39 (17)
N1—C2—C3—C4179.97 (14)C9—C10—C11—C152.60 (19)
C7—C2—C3—C4−0.4 (2)C18—C10—C11—C15−176.90 (12)
C2—C3—C4—C50.0 (2)C11—O1—C12—C1336.86 (16)
C17—O2—C5—C619.3 (2)C11—O1—C12—C19157.72 (12)
C17—O2—C5—C4−162.32 (14)C11—O1—C12—C20−83.65 (15)
C3—C4—C5—O2−177.91 (13)O1—C12—C13—C14−29.5 (2)
C3—C4—C5—C60.5 (2)C19—C12—C13—C14−145.39 (16)
O2—C5—C6—C7177.72 (13)C20—C12—C13—C1490.42 (18)
C4—C5—C6—C7−0.5 (2)C12—C13—C14—C156.7 (2)
C5—C6—C7—C20.09 (19)O1—C11—C15—C16−179.54 (10)
C5—C6—C7—C8−179.29 (13)C10—C11—C15—C16−4.22 (18)
N1—C2—C7—C6−179.94 (11)O1—C11—C15—C14−3.37 (18)
C3—C2—C7—C60.4 (2)C10—C11—C15—C14171.96 (12)
N1—C2—C7—C8−0.40 (14)C13—C14—C15—C16−172.97 (14)
C3—C2—C7—C8179.92 (12)C13—C14—C15—C1111.2 (2)
C6—C7—C8—C90.6 (2)C2—N1—C16—C15178.26 (13)
C2—C7—C8—C9−178.84 (13)C2—N1—C16—C8−1.24 (14)
C6—C7—C8—C16179.10 (13)C11—C15—C16—N1−176.68 (12)
C2—C7—C8—C16−0.34 (13)C14—C15—C16—N17.4 (2)
C16—C8—C9—C10−1.93 (18)C11—C15—C16—C82.77 (18)
C7—C8—C9—C10176.42 (12)C14—C15—C16—C8−173.14 (12)
C8—C9—C10—C110.59 (18)C9—C8—C16—N1179.73 (11)
C8—C9—C10—C18−179.91 (12)C7—C8—C16—N10.97 (14)
C12—O1—C11—C15−22.17 (17)C9—C8—C16—C150.18 (18)
C12—O1—C11—C10162.20 (11)C7—C8—C16—C15−178.58 (11)
Cg1 is the centroid of the N1/C2/C7/C8/C16 ring and Cg4 is the centroid of the C8–C11/C15/C16 ring.
D—H···AD—HH···AD···AD—H···A
C3—H3···O1i0.932.543.333 (2)143
N1—H1···Cg4ii0.872 (18)2.744 (17)3.528 (2)149.7 (14)
C17—H17C···Cg1iii0.963.083.489 (3)107
C17—H17C···Cg4iii0.963.003.514 (3)115
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the N1/C2/C7/C8/C16 ring and Cg4 is the centroid of the C8–C11/C15/C16 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O1i0.932.543.333 (2)143
N1—H1⋯Cg4ii0.872 (18)2.744 (17)3.528 (2)149.7 (14)
C17—H17CCg1iii0.963.083.489 (3)107
C17—H17CCg4iii0.963.003.514 (3)115

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Sources of the anti-implantation alkaloid yuehchukene in the genus Murraya.

Authors:  Y C Kong; K H Ng; P P But; Q Li; S X Yu; H T Zhang; K F Cheng; D D Soejarto; W S Kan; P G Waterman
Journal:  J Ethnopharmacol       Date:  1986-02       Impact factor: 4.360

3.  Biologically active carbazole alkaloids from Murraya koenigii.

Authors:  R S Ramsewak; M G Nair; G M Strasburg; D L DeWitt; J L Nitiss
Journal:  J Agric Food Chem       Date:  1999-02       Impact factor: 5.279

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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