| Literature DB >> 21587803 |
Mehmet Akkurt, Serife Pınar Yalçın, Hasan Türkmen, Orhan Büyükgüngör.
Abstract
In the title compound, C(9)H(11)ClN(2)O(3)S, the dihedral angle between the benzene ring and the amido -NHCO- plane is 15.0 (2)°. An intra-molecular C-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal structure, the amino NH(2) group is involved in inter-molecular N-H⋯O hydrogen bonds, which connect the mol-ecules into a double layer structure expanding parallel to the bc plane. The layers are further linked by an amido N-H⋯O hydrogen bond. Between the layers, a weak π-π inter-action with a centroid-centroid distance of 3.7447 (12) Å is also observed.Entities:
Year: 2010 PMID: 21587803 PMCID: PMC3006765 DOI: 10.1107/S1600536810020465
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11ClN2O3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8775 reflections |
| θ = 2.1–28.0° | |
| µ = 0.52 mm−1 | |
| β = 94.181 (4)° | Prism, colourless |
| 0.78 × 0.45 × 0.22 mm | |
| Stoe IPDS2 diffractometer | 2294 independent reflections |
| Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 2007 reflections with |
| plane graphite | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 26.5°, θmin = 2.5° |
| ω scans | |
| Absorption correction: integration ( | |
| 6023 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2294 reflections | (Δ/σ)max < 0.001 |
| 153 parameters | Δρmax = 0.28 e Å−3 |
| 2 restraints | Δρmin = −0.44 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| Cl1 | 0.18392 (12) | −0.00186 (4) | 0.38004 (9) | 0.0791 (3) | |
| S1 | 0.31196 (6) | 0.73280 (3) | 0.40392 (4) | 0.0330 (1) | |
| O1 | 0.2882 (2) | 0.75787 (10) | 0.54296 (14) | 0.0471 (5) | |
| O2 | 0.4665 (2) | 0.76199 (10) | 0.34461 (15) | 0.0445 (5) | |
| O3 | 0.1258 (2) | 0.28706 (10) | 0.52407 (19) | 0.0571 (6) | |
| N1 | 0.1520 (2) | 0.77368 (12) | 0.31092 (18) | 0.0398 (5) | |
| N2 | 0.3009 (2) | 0.33382 (11) | 0.36141 (18) | 0.0419 (5) | |
| C1 | 0.3044 (2) | 0.61415 (12) | 0.39403 (17) | 0.0331 (5) | |
| C2 | 0.2424 (3) | 0.56420 (15) | 0.4978 (2) | 0.0499 (7) | |
| C3 | 0.2372 (4) | 0.47119 (15) | 0.4898 (2) | 0.0530 (7) | |
| C4 | 0.2965 (2) | 0.42797 (13) | 0.37652 (19) | 0.0360 (5) | |
| C5 | 0.3592 (3) | 0.47919 (15) | 0.2722 (2) | 0.0508 (7) | |
| C6 | 0.3617 (3) | 0.57169 (15) | 0.2792 (2) | 0.0488 (7) | |
| C7 | 0.2202 (3) | 0.27011 (13) | 0.4329 (2) | 0.0389 (6) | |
| C8 | 0.2583 (3) | 0.17489 (14) | 0.3889 (2) | 0.0448 (6) | |
| C9 | 0.1263 (4) | 0.10957 (16) | 0.4265 (4) | 0.0725 (10) | |
| H1A | 0.153 (4) | 0.7665 (17) | 0.2235 (18) | 0.053 (7)* | |
| H1B | 0.055 (3) | 0.7636 (17) | 0.342 (3) | 0.051 (7)* | |
| H2 | 0.20340 | 0.59310 | 0.57430 | 0.0600* | |
| H2A | 0.36310 | 0.31400 | 0.29840 | 0.0500* | |
| H3 | 0.19400 | 0.43770 | 0.56030 | 0.0640* | |
| H5 | 0.40020 | 0.45050 | 0.19620 | 0.0610* | |
| H6 | 0.40150 | 0.60550 | 0.20760 | 0.0590* | |
| H8A | 0.26540 | 0.17370 | 0.29000 | 0.0540* | |
| H8B | 0.36990 | 0.15670 | 0.43140 | 0.0540* | |
| H9A | 0.01560 | 0.12520 | 0.38000 | 0.0870* | |
| H9B | 0.11490 | 0.11230 | 0.52490 | 0.0870* |
| Cl1 | 0.1120 (6) | 0.0337 (3) | 0.0982 (6) | −0.0094 (3) | 0.0520 (5) | −0.0065 (3) |
| S1 | 0.0424 (3) | 0.0302 (2) | 0.0276 (2) | −0.0060 (2) | 0.0106 (2) | −0.0011 (2) |
| O1 | 0.0702 (10) | 0.0434 (8) | 0.0294 (7) | −0.0105 (7) | 0.0146 (6) | −0.0057 (5) |
| O2 | 0.0459 (8) | 0.0452 (8) | 0.0440 (8) | −0.0140 (6) | 0.0142 (6) | 0.0000 (6) |
| O3 | 0.0628 (10) | 0.0383 (8) | 0.0757 (11) | −0.0035 (7) | 0.0427 (9) | −0.0018 (7) |
| N1 | 0.0471 (10) | 0.0372 (9) | 0.0367 (9) | 0.0024 (7) | 0.0131 (7) | 0.0019 (7) |
| N2 | 0.0504 (10) | 0.0315 (8) | 0.0466 (9) | 0.0014 (7) | 0.0233 (7) | −0.0011 (7) |
| C1 | 0.0382 (10) | 0.0295 (9) | 0.0323 (8) | 0.0002 (7) | 0.0075 (7) | 0.0012 (6) |
| C2 | 0.0740 (15) | 0.0352 (10) | 0.0443 (11) | 0.0005 (10) | 0.0310 (10) | 0.0001 (8) |
| C3 | 0.0814 (16) | 0.0348 (11) | 0.0473 (11) | 0.0008 (11) | 0.0354 (11) | 0.0060 (9) |
| C4 | 0.0383 (10) | 0.0315 (9) | 0.0394 (9) | 0.0021 (8) | 0.0116 (8) | 0.0022 (7) |
| C5 | 0.0732 (15) | 0.0387 (10) | 0.0447 (11) | −0.0035 (10) | 0.0323 (11) | −0.0041 (9) |
| C6 | 0.0712 (15) | 0.0377 (10) | 0.0410 (10) | −0.0061 (10) | 0.0278 (10) | 0.0009 (8) |
| C7 | 0.0385 (10) | 0.0335 (10) | 0.0461 (11) | −0.0008 (8) | 0.0126 (8) | 0.0004 (8) |
| C8 | 0.0500 (12) | 0.0344 (10) | 0.0520 (11) | −0.0010 (9) | 0.0176 (9) | −0.0027 (8) |
| C9 | 0.0714 (18) | 0.0328 (11) | 0.118 (2) | −0.0020 (12) | 0.0382 (17) | −0.0012 (13) |
| Cl1—C9 | 1.778 (3) | C3—C4 | 1.384 (3) |
| S1—O1 | 1.4302 (14) | C4—C5 | 1.385 (3) |
| S1—O2 | 1.4349 (16) | C5—C6 | 1.373 (3) |
| S1—N1 | 1.6012 (17) | C7—C8 | 1.510 (3) |
| S1—C1 | 1.7617 (18) | C8—C9 | 1.475 (4) |
| O3—C7 | 1.218 (3) | C2—H2 | 0.9300 |
| N2—C4 | 1.404 (3) | C3—H3 | 0.9300 |
| N2—C7 | 1.354 (3) | C5—H5 | 0.9300 |
| N1—H1A | 0.859 (18) | C6—H6 | 0.9300 |
| N1—H1B | 0.85 (2) | C8—H8A | 0.9700 |
| N2—H2A | 0.8600 | C8—H8B | 0.9700 |
| C1—C2 | 1.369 (3) | C9—H9A | 0.9700 |
| C1—C6 | 1.385 (3) | C9—H9B | 0.9700 |
| C2—C3 | 1.381 (3) | ||
| Cl1···N1i | 3.3993 (19) | C3···O3 | 2.889 (3) |
| Cl1···C9ii | 3.543 (3) | C7···O2vi | 3.173 (3) |
| Cl1···H9Bii | 3.0400 | C8···O2vi | 3.372 (3) |
| S1···O1iii | 3.5128 (14) | C9···Cl1ii | 3.543 (3) |
| O1···N1iv | 2.926 (2) | C7···H3 | 2.7900 |
| O1···S1iv | 3.5128 (14) | C8···H6x | 3.0400 |
| O1···O2iv | 3.171 (2) | H1A···O1iii | 2.14 (2) |
| O2···N2v | 2.992 (2) | H1A···H2iii | 2.5800 |
| O2···C8vi | 3.372 (3) | H1B···O3vii | 2.12 (3) |
| O2···O1iii | 3.171 (2) | H2···O1 | 2.5500 |
| O2···C7vi | 3.173 (3) | H2···H1Aiv | 2.5800 |
| O3···N1vii | 2.923 (2) | H2A···H5 | 2.2800 |
| O3···C3 | 2.889 (3) | H2A···H8A | 2.2100 |
| O1···H6iv | 2.6900 | H2A···O2x | 2.1300 |
| O1···H1Aiv | 2.14 (2) | H3···O3 | 2.3200 |
| O1···H2 | 2.5500 | H3···C7 | 2.7900 |
| O2···H8Av | 2.8600 | H5···H2A | 2.2800 |
| O2···H6 | 2.7100 | H6···O2 | 2.7100 |
| O2···H2Av | 2.1300 | H6···C8v | 3.0400 |
| O2···H8Bvi | 2.7200 | H6···H8Bv | 2.4300 |
| O3···H9A | 2.8800 | H6···O1iii | 2.6900 |
| O3···H9B | 2.5900 | H8A···H2A | 2.2100 |
| O3···H3 | 2.3200 | H8A···O2x | 2.8600 |
| O3···H1Bvii | 2.12 (3) | H8A···O3xi | 2.8000 |
| O3···H8Aviii | 2.8000 | H8B···H6x | 2.4300 |
| N1···Cl1ix | 3.3993 (19) | H8B···O2vi | 2.7200 |
| N1···O3vii | 2.923 (2) | H9A···O3 | 2.8800 |
| N1···O1iii | 2.926 (2) | H9B···O3 | 2.5900 |
| N2···O2x | 2.991 (2) | H9B···Cl1ii | 3.0400 |
| O1—S1—O2 | 118.21 (9) | N2—C7—C8 | 113.46 (18) |
| O1—S1—N1 | 106.87 (9) | O3—C7—C8 | 122.71 (18) |
| O1—S1—C1 | 107.76 (8) | C7—C8—C9 | 112.9 (2) |
| O2—S1—N1 | 107.05 (9) | Cl1—C9—C8 | 110.8 (2) |
| O2—S1—C1 | 107.72 (8) | C1—C2—H2 | 120.00 |
| N1—S1—C1 | 108.98 (9) | C3—C2—H2 | 120.00 |
| C4—N2—C7 | 128.58 (17) | C2—C3—H3 | 120.00 |
| S1—N1—H1A | 117 (2) | C4—C3—H3 | 120.00 |
| S1—N1—H1B | 113.8 (19) | C4—C5—H5 | 120.00 |
| H1A—N1—H1B | 114 (3) | C6—C5—H5 | 119.00 |
| C4—N2—H2A | 116.00 | C1—C6—H6 | 120.00 |
| C7—N2—H2A | 116.00 | C5—C6—H6 | 120.00 |
| S1—C1—C2 | 120.76 (14) | C7—C8—H8A | 109.00 |
| S1—C1—C6 | 119.09 (14) | C7—C8—H8B | 109.00 |
| C2—C1—C6 | 120.15 (18) | C9—C8—H8A | 109.00 |
| C1—C2—C3 | 120.56 (19) | C9—C8—H8B | 109.00 |
| C2—C3—C4 | 119.8 (2) | H8A—C8—H8B | 108.00 |
| N2—C4—C5 | 117.07 (17) | Cl1—C9—H9A | 109.00 |
| C3—C4—C5 | 119.15 (19) | Cl1—C9—H9B | 109.00 |
| N2—C4—C3 | 123.77 (18) | C8—C9—H9A | 110.00 |
| C4—C5—C6 | 121.01 (19) | C8—C9—H9B | 109.00 |
| C1—C6—C5 | 119.32 (19) | H9A—C9—H9B | 108.00 |
| O3—C7—N2 | 123.84 (18) | ||
| O1—S1—C1—C2 | 14.47 (18) | C2—C1—C6—C5 | −1.5 (3) |
| O2—S1—C1—C2 | 143.03 (16) | C6—C1—C2—C3 | 0.4 (3) |
| N1—S1—C1—C2 | −101.16 (17) | C1—C2—C3—C4 | 0.6 (4) |
| O1—S1—C1—C6 | −165.74 (15) | C2—C3—C4—N2 | 178.1 (2) |
| O2—S1—C1—C6 | −37.18 (17) | C2—C3—C4—C5 | −0.5 (3) |
| N1—S1—C1—C6 | 78.63 (17) | N2—C4—C5—C6 | −179.24 (19) |
| C7—N2—C4—C3 | 15.1 (3) | C3—C4—C5—C6 | −0.6 (3) |
| C7—N2—C4—C5 | −166.4 (2) | C4—C5—C6—C1 | 1.6 (3) |
| C4—N2—C7—O3 | 1.0 (3) | O3—C7—C8—C9 | 21.5 (3) |
| C4—N2—C7—C8 | −178.99 (18) | N2—C7—C8—C9 | −158.5 (2) |
| S1—C1—C2—C3 | −179.80 (19) | C7—C8—C9—Cl1 | −177.00 (18) |
| S1—C1—C6—C5 | 178.75 (17) |
| H··· | ||||
| N1—H1A···O1iii | 0.859 (18) | 2.14 (2) | 2.926 (2) | 151 (3) |
| N1—H1B···O3vii | 0.85 (2) | 2.12 (3) | 2.923 (2) | 158 (3) |
| N2—H2A···O2x | 0.86 | 2.13 | 2.991 (2) | 175 |
| C3—H3···O3 | 0.93 | 2.32 | 2.889 (3) | 120 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.859 (18) | 2.14 (2) | 2.926 (2) | 151 (3) |
| N1—H1 | 0.85 (2) | 2.12 (3) | 2.923 (2) | 158 (3) |
| N2—H2 | 0.86 | 2.13 | 2.991 (2) | 175 |
| C3—H3⋯O3 | 0.93 | 2.32 | 2.889 (3) | 120 |
Symmetry codes: (i) ; (ii) ; (iii) .