Literature DB >> 21587790

(2-Chloro-6-methyl-quinolin-3-yl)methanol.

F Nawaz Khan, S Mohana Roopan, Atul Kumar Kushwaha, Venkatesha R Hathwar, Mehmet Akkurt.   

Abstract

The title compound, C(11)H(10)ClNO, is close to being planar (r.m.s deviation for the non-H atoms = 0.026 Å). In the crystal, mol-ecules are linked by O-H⋯O hydrogen bonds, generating C(2) chains, and weak C-H⋯π inter-actions and aromatic π-π stacking inter-actions [centroid-centroid distance = 3.713 (3) Å] help to consolidate the structure.

Entities:  

Year:  2010        PMID: 21587790      PMCID: PMC3007021          DOI: 10.1107/S1600536810020507

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background references, see: Roopan et al. (2010 ▶). For the structure of the starting material, see: Khan et al. (2009 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C11H10ClNO M = 207.65 Monoclinic, a = 14.8091 (17) Å b = 4.6387 (5) Å c = 14.5098 (11) Å β = 96.594 (9)° V = 990.16 (17) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 295 K 0.35 × 0.15 × 0.08 mm

Data collection

Oxford Xcalibur Eos(Nova) CCD diffractometer Absorption correction: multi-scan CrysAlis PRO RED (Oxford Diffraction, 2009 ▶) T min = 0.888, T max = 0.973 15485 measured reflections 1721 independent reflections 913 reflections with I > 2σ(I) R int = 0.136

Refinement

R[F 2 > 2σ(F 2)] = 0.085 wR(F 2) = 0.222 S = 0.94 1721 reflections 131 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.46 e Å−3 Data collection: CrysAlis PRO CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO CCD; data reduction: CrysAlis PRO RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810020507/hb5471sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810020507/hb5471Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H10ClNOF(000) = 432
Mr = 207.65Dx = 1.393 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 865 reflections
a = 14.8091 (17) Åθ = 2.7–21.4°
b = 4.6387 (5) ŵ = 0.35 mm1
c = 14.5098 (11) ÅT = 295 K
β = 96.594 (9)°Plate, colourless
V = 990.16 (17) Å30.35 × 0.15 × 0.08 mm
Z = 4
Oxford Xcalibur Eos(Nova) CCD diffractometer1721 independent reflections
Radiation source: Enhance (Mo) X-ray Source913 reflections with I > 2σ(I)
graphiteRint = 0.136
ω scansθmax = 25.0°, θmin = 3.0°
Absorption correction: multi-scan CrysAlis PRO RED (Oxford Diffraction, 2009)h = −17→17
Tmin = 0.888, Tmax = 0.973k = −5→5
15485 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.085Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.222H atoms treated by a mixture of independent and constrained refinement
S = 0.94w = 1/[σ2(Fo2) + (0.1359P)2] where P = (Fo2 + 2Fc2)/3
1721 reflections(Δ/σ)max < 0.001
131 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.13152 (10)0.6780 (3)−0.04947 (8)0.0717 (6)
O10.0334 (3)0.9035 (7)0.2189 (2)0.0580 (14)
N10.2440 (3)0.3573 (8)0.0535 (2)0.0448 (14)
C10.2832 (3)0.2406 (10)0.1357 (3)0.0409 (16)
C20.3535 (3)0.0442 (11)0.1360 (3)0.0554 (19)
C30.3939 (3)−0.0710 (12)0.2179 (4)0.0583 (19)
C40.3645 (3)0.0074 (11)0.3034 (3)0.0529 (19)
C50.2963 (3)0.1980 (10)0.3040 (3)0.0454 (16)
C60.2534 (3)0.3238 (9)0.2222 (3)0.0369 (16)
C70.1817 (3)0.5231 (9)0.2194 (3)0.0438 (16)
C80.1412 (3)0.6383 (9)0.1376 (3)0.0414 (16)
C90.1799 (3)0.5394 (10)0.0572 (3)0.0454 (16)
C100.0641 (3)0.8449 (9)0.1312 (3)0.0465 (17)
C110.4114 (4)−0.1220 (14)0.3929 (4)0.078 (2)
H1O0.014 (4)0.756 (13)0.235 (4)0.0870*
H20.37380−0.010500.080200.0670*
H30.44130−0.202200.216800.0700*
H50.276700.248500.360500.0550*
H70.160800.579000.274800.0520*
H10A0.082701.024200.104600.0560*
H10B0.014000.766900.089700.0560*
H11A0.37370−0.096200.441800.1170*
H11B0.46870−0.027200.409300.1170*
H11C0.42160−0.324000.384100.1170*
U11U22U33U12U13U23
Cl10.0999 (12)0.0913 (12)0.0243 (7)0.0084 (8)0.0089 (6)0.0093 (6)
O10.085 (3)0.051 (2)0.043 (2)0.0031 (19)0.0292 (17)−0.0008 (17)
N10.066 (3)0.048 (2)0.0223 (19)−0.001 (2)0.0139 (17)−0.0045 (16)
C10.048 (3)0.051 (3)0.025 (2)−0.003 (2)0.0102 (18)−0.007 (2)
C20.061 (3)0.073 (4)0.035 (3)−0.005 (3)0.018 (2)−0.007 (2)
C30.056 (3)0.069 (4)0.051 (3)0.004 (3)0.011 (2)−0.009 (3)
C40.056 (3)0.070 (4)0.033 (3)−0.001 (3)0.007 (2)0.006 (2)
C50.056 (3)0.056 (3)0.025 (2)−0.005 (2)0.008 (2)−0.004 (2)
C60.050 (3)0.041 (3)0.021 (2)−0.001 (2)0.0102 (18)−0.0049 (18)
C70.063 (3)0.053 (3)0.017 (2)−0.009 (3)0.0118 (19)−0.0055 (19)
C80.056 (3)0.042 (3)0.028 (2)−0.007 (2)0.0125 (19)−0.003 (2)
C90.068 (3)0.049 (3)0.020 (2)−0.005 (3)0.009 (2)0.000 (2)
C100.070 (3)0.037 (3)0.035 (3)−0.003 (2)0.017 (2)−0.003 (2)
C110.087 (4)0.105 (5)0.041 (3)0.009 (3)0.001 (3)0.006 (3)
Cl1—C91.751 (5)C7—C81.375 (6)
O1—C101.426 (5)C8—C91.433 (6)
O1—H1O0.79 (6)C8—C101.485 (6)
N1—C91.276 (6)C2—H20.9300
N1—C11.376 (5)C3—H30.9300
C1—C21.383 (7)C5—H50.9300
C1—C61.431 (6)C7—H70.9300
C2—C31.376 (7)C10—H10A0.9700
C3—C41.409 (7)C10—H10B0.9700
C4—C111.524 (7)C11—H11A0.9600
C4—C51.343 (7)C11—H11B0.9600
C5—C61.407 (6)C11—H11C0.9600
C6—C71.405 (6)
C10—O1—H1O105 (4)O1—C10—C8112.9 (4)
C1—N1—C9117.8 (4)C1—C2—H2120.00
N1—C1—C2120.3 (4)C3—C2—H2120.00
N1—C1—C6120.8 (4)C2—C3—H3120.00
C2—C1—C6118.9 (4)C4—C3—H3120.00
C1—C2—C3120.7 (4)C4—C5—H5119.00
C2—C3—C4120.8 (4)C6—C5—H5119.00
C3—C4—C11119.5 (4)C6—C7—H7119.00
C5—C4—C11121.6 (4)C8—C7—H7119.00
C3—C4—C5119.0 (4)O1—C10—H10A109.00
C4—C5—C6122.3 (4)O1—C10—H10B109.00
C1—C6—C5118.3 (4)C8—C10—H10A109.00
C5—C6—C7124.3 (4)C8—C10—H10B109.00
C1—C6—C7117.4 (4)H10A—C10—H10B108.00
C6—C7—C8122.3 (4)C4—C11—H11A110.00
C7—C8—C10124.1 (4)C4—C11—H11B110.00
C9—C8—C10122.2 (4)C4—C11—H11C110.00
C7—C8—C9113.8 (4)H11A—C11—H11B109.00
Cl1—C9—N1115.9 (3)H11A—C11—H11C110.00
N1—C9—C8128.0 (4)H11B—C11—H11C109.00
Cl1—C9—C8116.2 (3)
C9—N1—C1—C2−179.4 (4)C11—C4—C5—C6178.8 (5)
C9—N1—C1—C6−0.6 (7)C4—C5—C6—C11.0 (7)
C1—N1—C9—Cl1−179.3 (3)C4—C5—C6—C7179.8 (5)
C1—N1—C9—C8−1.1 (7)C1—C6—C7—C8−0.5 (6)
N1—C1—C2—C3179.2 (5)C5—C6—C7—C8−179.3 (4)
C6—C1—C2—C30.4 (7)C6—C7—C8—C9−0.9 (6)
N1—C1—C6—C5−179.8 (4)C6—C7—C8—C10178.7 (4)
N1—C1—C6—C71.4 (6)C7—C8—C9—Cl1−180.0 (3)
C2—C1—C6—C5−1.0 (6)C7—C8—C9—N11.8 (7)
C2—C1—C6—C7−179.8 (4)C10—C8—C9—Cl10.4 (6)
C1—C2—C3—C40.2 (8)C10—C8—C9—N1−177.8 (4)
C2—C3—C4—C5−0.2 (7)C7—C8—C10—O1−2.5 (6)
C2—C3—C4—C11−179.4 (5)C9—C8—C10—O1177.1 (4)
C3—C4—C5—C6−0.4 (7)
Cg1 is the centroid of the N1/C1/C6–C9 ring.
D—H···AD—HH···AD···AD—H···A
O1—H1O···O1i0.79 (6)1.93 (6)2.716 (5)177 (7)
C10—H10A···Cg1ii0.972.733.526 (5)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the N1/C1/C6–C9 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O⋯O1i0.79 (6)1.93 (6)2.716 (5)177 (7)
C10—H10ACg1ii0.972.733.526 (5)139

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Chloro-6-methyl-quinoline-3-carbaldehyde.

Authors:  F Nawaz Khan; R Subashini; S Mohana Roopan; Venkatesha R Hathwar; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10

3.  (2-Chloro-8-meth-oxy-quinolin-3-yl)methanol monohydrate.

Authors:  S Mohana Roopan; F Nawaz Khan; A Sudheer Kumar; Venkatesha R Hathwar; Mehmet Akkurt
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